RNA–Protein interactions for RNA: ENST00000520619.1

SNHG6-202, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 3 BASIC

Gene SNHG6, Length 479 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-202ENST00000520619 AXIN1O15169 862 aa8.36□□□□□ -1.07
SNHG6-202ENST00000520619 POM121Q96HA1 1249 aa8.36□□□□□ -1.07
SNHG6-202ENST00000520619 NBPF20Q3BBV1 942 aa8.35□□□□□ -1.07
SNHG6-202ENST00000520619 KLF16Q9BXK1 252 aaPredicted RBP8.35□□□□□ -1.07
SNHG6-202ENST00000520619 PCDHB9Q9Y5E1 797 aa8.35□□□□□ -1.07
SNHG6-202ENST00000520619 UBTFP17480 764 aaKnown RBP8.34□□□□□ -1.07
SNHG6-202ENST00000520619 TIMP2P16035 220 aa8.33□□□□□ -1.08
SNHG6-202ENST00000520619 WDR4P57081 412 aaKnown RBP8.33□□□□□ -1.08
SNHG6-202ENST00000520619 CCDC116Q8IYX3 515 aa8.33□□□□□ -1.08
SNHG6-202ENST00000520619 DACH1Q9UI36 760 aa8.33□□□□□ -1.08
SNHG6-202ENST00000520619 ZNF330Q9Y3S2 320 aaPredicted RBP8.33□□□□□ -1.08
SNHG6-202ENST00000520619 CAPN5O15484 640 aaPredicted RBP8.32□□□□□ -1.08
SNHG6-202ENST00000520619 RAD21O60216 631 aa8.32□□□□□ -1.08
SNHG6-202ENST00000520619 VAC14Q08AM6 782 aa8.32□□□□□ -1.08
SNHG6-202ENST00000520619 INTS6LQ5JSJ4 861 aaKnown RBP8.32□□□□□ -1.08
SNHG6-202ENST00000520619 ESPNB1AK53 854 aa8.31□□□□□ -1.08
SNHG6-202ENST00000520619 ZIC2O95409 532 aaPredicted RBP8.31□□□□□ -1.08
SNHG6-202ENST00000520619 MCCD1P59942 119 aaPredicted RBP8.31□□□□□ -1.08
SNHG6-202ENST00000520619 PPP1R26Q5T8A7 1209 aaPredicted RBP8.31□□□□□ -1.08
SNHG6-202ENST00000520619 ITPKCQ96DU7 683 aa8.31□□□□□ -1.08
SNHG6-202ENST00000520619 GIGYF1O75420 1035 aaPredicted RBP8.3□□□□□ -1.08
SNHG6-202ENST00000520619 RAB15P59190 212 aa8.3□□□□□ -1.08
SNHG6-202ENST00000520619 DHX9Q08211 1270 aaKnown RBP8.3□□□□□ -1.08
SNHG6-202ENST00000520619 WASHC4Q2M389 1173 aa8.3□□□□□ -1.08
SNHG6-202ENST00000520619 ZNF592Q92610 1267 aa8.3□□□□□ -1.08
SNHG6-202ENST00000520619 ZFAND3Q9H8U3 227 aa8.3□□□□□ -1.08
SNHG6-202ENST00000520619 EMILIN1Q9Y6C2 1016 aa8.3□□□□□ -1.08
SNHG6-202ENST00000520619 EIF4G2P78344 907 aaKnown RBP eCLIP8.29□□□□□ -1.08
SNHG6-202ENST00000520619 SEPT12Q8IYM1 358 aa8.28□□□□□ -1.08
SNHG6-202ENST00000520619 CLUAP1Q96AJ1 413 aa8.28□□□□□ -1.08
SNHG6-202ENST00000520619 ATP13A2Q9NQ11 1180 aa8.28□□□□□ -1.08
SNHG6-202ENST00000520619 ERVH48-1M5A8F1 160 aa8.27□□□□□ -1.09
SNHG6-202ENST00000520619 WWC1Q8IX03 1113 aa8.27□□□□□ -1.09
SNHG6-202ENST00000520619 PGPEP1Q9NXJ5 209 aa8.27□□□□□ -1.09
SNHG6-202ENST00000520619 POTECB2RU33 542 aa8.26□□□□□ -1.09
SNHG6-202ENST00000520619 BMP1P13497 986 aa8.26□□□□□ -1.09
SNHG6-202ENST00000520619 TMPRSS4Q9NRS4 437 aa8.26□□□□□ -1.09
SNHG6-202ENST00000520619 CEP126Q9P2H0 1117 aa8.26□□□□□ -1.09
SNHG6-202ENST00000520619 RNF20Q5VTR2 975 aa8.25□□□□□ -1.09
SNHG6-202ENST00000520619 TRIM46Q7Z4K8 759 aa8.25□□□□□ -1.09
SNHG6-202ENST00000520619 ZNF784Q8NCA9 323 aaPredicted RBP8.25□□□□□ -1.09
SNHG6-202ENST00000520619 GMPR2Q9P2T1 348 aaKnown RBP8.25□□□□□ -1.09
SNHG6-202ENST00000520619 GTF3C3Q9Y5Q9 886 aa8.25□□□□□ -1.09
SNHG6-202ENST00000520619 SOX11P35716 441 aa8.24□□□□□ -1.09
SNHG6-202ENST00000520619 CBLBQ13191 982 aa8.24□□□□□ -1.09
SNHG6-202ENST00000520619 MRPL14Q6P1L8 145 aaKnown RBP8.24□□□□□ -1.09
SNHG6-202ENST00000520619 MEIOBQ8N635 442 aa8.24□□□□□ -1.09
SNHG6-202ENST00000520619 SEMA3FQ13275 785 aa8.23□□□□□ -1.09
SNHG6-202ENST00000520619 ZNF787Q6DD87 383 aa8.23□□□□□ -1.09
SNHG6-202ENST00000520619 Q6ZVU0 165 aa8.23□□□□□ -1.09
SNHG6-202ENST00000520619 PROSER2Q86WR7 435 aaPredicted RBP8.23□□□□□ -1.09
SNHG6-202ENST00000520619 CCDC125Q86Z20 511 aa8.23□□□□□ -1.09
SNHG6-202ENST00000520619 FNBP4Q8N3X1 1017 aaPredicted RBP8.23□□□□□ -1.09
SNHG6-202ENST00000520619 A6NJR5 290 aa8.22□□□□□ -1.09
SNHG6-202ENST00000520619 POM121CA8CG34 1229 aa8.22□□□□□ -1.09
SNHG6-202ENST00000520619 LILRA1O75019 489 aa8.22□□□□□ -1.09
SNHG6-202ENST00000520619 PHTF2Q8N3S3 785 aa8.22□□□□□ -1.09
SNHG6-202ENST00000520619 LINC00528Q8N1L1 170 aa8.21□□□□□ -1.1
SNHG6-202ENST00000520619 ZFP42Q96MM3 310 aa8.21□□□□□ -1.1
SNHG6-202ENST00000520619 ALG2Q9H553 416 aa8.21□□□□□ -1.1
SNHG6-202ENST00000520619 SENP2Q9HC62 589 aa8.21□□□□□ -1.1
SNHG6-202ENST00000520619 CYLDQ9NQC7 956 aa8.21□□□□□ -1.1
SNHG6-202ENST00000520619 PCDHB11Q9Y5F2 797 aa8.21□□□□□ -1.1
SNHG6-202ENST00000520619 ADD1P35611 737 aaKnown RBP8.2□□□□□ -1.1
SNHG6-202ENST00000520619 SLFNL1Q499Z3 407 aa8.2□□□□□ -1.1
SNHG6-202ENST00000520619 TRIM47Q96LD4 638 aa8.2□□□□□ -1.1
SNHG6-202ENST00000520619 CCDC85AQ96PX6 553 aaPredicted RBP8.2□□□□□ -1.1
SNHG6-202ENST00000520619 PURBQ96QR8 312 aaKnown RBP8.2□□□□□ -1.1
SNHG6-202ENST00000520619 C11orf95C9JLR9 678 aaPredicted RBP8.19□□□□□ -1.1
SNHG6-202ENST00000520619 UPP2O95045 317 aa8.19□□□□□ -1.1
SNHG6-202ENST00000520619 ERVK-9P63128 1117 aa8.19□□□□□ -1.1
SNHG6-202ENST00000520619 SCARF1Q14162 830 aa8.19□□□□□ -1.1
SNHG6-202ENST00000520619 ADAMTS19Q8TE59 1207 aa8.19□□□□□ -1.1
SNHG6-202ENST00000520619 TRIM52Q96A61 297 aa8.19□□□□□ -1.1
SNHG6-202ENST00000520619 KIFC2Q96AC6 838 aa8.19□□□□□ -1.1
SNHG6-202ENST00000520619 TSEN34Q9BSV6 310 aaKnown RBP8.19□□□□□ -1.1
SNHG6-202ENST00000520619 BMP2P12643 396 aa8.18□□□□□ -1.1
SNHG6-202ENST00000520619 SNRPBP14678 240 aaKnown RBP8.18□□□□□ -1.1
SNHG6-202ENST00000520619 SCTRP47872 440 aa8.18□□□□□ -1.1
SNHG6-202ENST00000520619 TSGA10IPQ3SY00 556 aa8.18□□□□□ -1.1
SNHG6-202ENST00000520619 C6orf118Q5T5N4 469 aa8.18□□□□□ -1.1
SNHG6-202ENST00000520619 CC2D2BQ6DHV5 1058 aa8.18□□□□□ -1.1
SNHG6-202ENST00000520619 RNF135Q8IUD6 432 aa8.18□□□□□ -1.1
SNHG6-202ENST00000520619 AGBL1Q96MI9 1066 aa8.18□□□□□ -1.1
SNHG6-202ENST00000520619 ADH1AP07327 375 aa8.17□□□□□ -1.1
SNHG6-202ENST00000520619 KDF1Q8NAX2 398 aaPredicted RBP8.17□□□□□ -1.1
SNHG6-202ENST00000520619 CDCA7Q9BWT1 371 aaPredicted RBP8.17□□□□□ -1.1
SNHG6-202ENST00000520619 CHIC2Q9UKJ5 165 aa8.17□□□□□ -1.1
SNHG6-202ENST00000520619 PIK3CDO00329 1044 aa8.16□□□□□ -1.1
SNHG6-202ENST00000520619 RELBQ01201 579 aa8.16□□□□□ -1.1
SNHG6-202ENST00000520619 HDGFL1Q5TGJ6 251 aa8.16□□□□□ -1.1
SNHG6-202ENST00000520619 DOLKQ9UPQ8 538 aa8.16□□□□□ -1.1
SNHG6-202ENST00000520619 SPINT1O43278 529 aa8.14□□□□□ -1.11
SNHG6-202ENST00000520619 PLPP7Q8NBV4 271 aa8.14□□□□□ -1.11
SNHG6-202ENST00000520619 OSBPL3Q9H4L5 887 aa8.14□□□□□ -1.11
SNHG6-202ENST00000520619 ZNF395Q9H8N7 513 aaPredicted RBP8.14□□□□□ -1.11
SNHG6-202ENST00000520619 ATP5J2-PTCD1G3V325 749 aa8.13□□□□□ -1.11
SNHG6-202ENST00000520619 TRAK2O60296 914 aa8.13□□□□□ -1.11
SNHG6-202ENST00000520619 PTGIRP43119 386 aa8.13□□□□□ -1.11
SNHG6-202ENST00000520619 MAP7D1Q3KQU3 841 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms