RNA–Protein interactions for RNA: ENST00000520003.5

CSGALNACT1-208, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 4

Gene CSGALNACT1, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-208ENST00000520003 ANO8Q9HCE9 1232 aaPredicted RBP22.64■■□□□ 1.21
CSGALNACT1-208ENST00000520003 CPSF1Q10570 1443 aaKnown RBP22.64■■□□□ 1.21
CSGALNACT1-208ENST00000520003 TOM1L2Q6ZVM7 507 aa22.63■■□□□ 1.21
CSGALNACT1-208ENST00000520003 PTF1AQ7RTS3 328 aa22.63■■□□□ 1.21
CSGALNACT1-208ENST00000520003 ARHGEF25Q86VW2 580 aa22.63■■□□□ 1.21
CSGALNACT1-208ENST00000520003 ZBTB7CA1YPR0 619 aa22.62■■□□□ 1.21
CSGALNACT1-208ENST00000520003 YY1P25490 414 aa22.62■■□□□ 1.21
CSGALNACT1-208ENST00000520003 MARCH10Q8NA82 808 aaPredicted RBP22.62■■□□□ 1.21
CSGALNACT1-208ENST00000520003 WNK3Q9BYP7 1800 aa22.61■■□□□ 1.21
CSGALNACT1-208ENST00000520003 PROM2Q8N271 834 aa22.61■■□□□ 1.21
CSGALNACT1-208ENST00000520003 L3MBTL2Q969R5 705 aa22.61■■□□□ 1.21
CSGALNACT1-208ENST00000520003 CDCA7Q9BWT1 371 aaPredicted RBP22.61■■□□□ 1.21
CSGALNACT1-208ENST00000520003 CASZ1Q86V15 1759 aa22.61■■□□□ 1.21
CSGALNACT1-208ENST00000520003 EVC2Q86UK5 1308 aa22.6■■□□□ 1.21
CSGALNACT1-208ENST00000520003 PPP1R1BQ9UD71 204 aaPredicted RBP22.6■■□□□ 1.21
CSGALNACT1-208ENST00000520003 TTC21BQ7Z4L5 1316 aa22.59■■□□□ 1.21
CSGALNACT1-208ENST00000520003 ZNF692Q9BU19 519 aaPredicted RBP22.58■■□□□ 1.21
CSGALNACT1-208ENST00000520003 CARD10Q9BWT7 1032 aa22.58■■□□□ 1.21
CSGALNACT1-208ENST00000520003 KCNH5Q8NCM2 988 aa22.57■■□□□ 1.2
CSGALNACT1-208ENST00000520003 PDGFDQ9GZP0 370 aaPredicted RBP22.56■■□□□ 1.2
CSGALNACT1-208ENST00000520003 NFAT5O94916 1531 aa22.56■■□□□ 1.2
CSGALNACT1-208ENST00000520003 TTC21AQ8NDW8 1320 aa22.56■■□□□ 1.2
CSGALNACT1-208ENST00000520003 SIN3AQ96ST3 1273 aa22.55■■□□□ 1.2
CSGALNACT1-208ENST00000520003 AKAP12Q02952 1782 aa22.54■■□□□ 1.2
CSGALNACT1-208ENST00000520003 ABCC6O95255 1503 aa22.54■■□□□ 1.2
CSGALNACT1-208ENST00000520003 PTGER2P43116 358 aa22.53■■□□□ 1.2
CSGALNACT1-208ENST00000520003 RGPD5Q99666 1765 aa22.52■■□□□ 1.2
CSGALNACT1-208ENST00000520003 CCDC7Q96M83 1385 aa22.51■■□□□ 1.19
CSGALNACT1-208ENST00000520003 TXNRD1Q16881 649 aa22.51■■□□□ 1.19
CSGALNACT1-208ENST00000520003 TNS2Q63HR2 1409 aa22.5■■□□□ 1.19
CSGALNACT1-208ENST00000520003 DCAF8L1A6NGE4 600 aa22.49■■□□□ 1.19
CSGALNACT1-208ENST00000520003 EXOC5O00471 708 aa22.49■■□□□ 1.19
CSGALNACT1-208ENST00000520003 CSB-PGBD3P0DP91 1061 aa22.49■■□□□ 1.19
CSGALNACT1-208ENST00000520003 SOX12O15370 315 aa22.48■■□□□ 1.19
CSGALNACT1-208ENST00000520003 ZBTB7AO95365 584 aa22.48■■□□□ 1.19
CSGALNACT1-208ENST00000520003 ROCK2O75116 1388 aaKnown RBP22.48■■□□□ 1.19
CSGALNACT1-208ENST00000520003 USP31Q70CQ4 1352 aa22.48■■□□□ 1.19
CSGALNACT1-208ENST00000520003 KTN1Q86UP2 1357 aaKnown RBP22.48■■□□□ 1.19
CSGALNACT1-208ENST00000520003 MYOM1P52179 1685 aa22.47■■□□□ 1.19
CSGALNACT1-208ENST00000520003 SLC15A2Q16348 729 aa22.47■■□□□ 1.19
CSGALNACT1-208ENST00000520003 STK32BQ9NY57 414 aa22.46■■□□□ 1.19
CSGALNACT1-208ENST00000520003 SBNO2Q9Y2G9 1366 aa22.46■■□□□ 1.19
CSGALNACT1-208ENST00000520003 USP54Q70EL1 1684 aa22.46■■□□□ 1.19
CSGALNACT1-208ENST00000520003 SGIP1Q9BQI5 828 aa22.45■■□□□ 1.18
CSGALNACT1-208ENST00000520003 MON2Q7Z3U7 1717 aa22.45■■□□□ 1.18
CSGALNACT1-208ENST00000520003 ERBB3P21860 1342 aa22.44■■□□□ 1.18
CSGALNACT1-208ENST00000520003 NEUROD1Q13562 356 aa22.44■■□□□ 1.18
CSGALNACT1-208ENST00000520003 NHSQ6T4R5 1651 aa22.44■■□□□ 1.18
CSGALNACT1-208ENST00000520003 CD163L1Q9NR16 1453 aa22.43■■□□□ 1.18
CSGALNACT1-208ENST00000520003 ATF5Q9Y2D1 282 aaPredicted RBP22.43■■□□□ 1.18
CSGALNACT1-208ENST00000520003 UTRNP46939 3433 aa22.42■■□□□ 1.18
CSGALNACT1-208ENST00000520003 PAPPAQ13219 1627 aa22.42■■□□□ 1.18
CSGALNACT1-208ENST00000520003 MTFR1LQ9H019 292 aa22.41■■□□□ 1.18
CSGALNACT1-208ENST00000520003 SYT17Q9BSW7 474 aa22.4■■□□□ 1.18
CSGALNACT1-208ENST00000520003 FHDC1Q9C0D6 1143 aaPredicted RBP22.4■■□□□ 1.18
CSGALNACT1-208ENST00000520003 NME9Q86XW9 330 aa22.38■■□□□ 1.17
CSGALNACT1-208ENST00000520003 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.38■■□□□ 1.17
CSGALNACT1-208ENST00000520003 IL2RBP14784 551 aa22.37■■□□□ 1.17
CSGALNACT1-208ENST00000520003 ACSBG1Q96GR2 724 aa22.37■■□□□ 1.17
CSGALNACT1-208ENST00000520003 NLRP2Q9NX02 1062 aa22.36■■□□□ 1.17
CSGALNACT1-208ENST00000520003 MAP3K5Q99683 1374 aa22.35■■□□□ 1.17
CSGALNACT1-208ENST00000520003 ZNF784Q8NCA9 323 aaPredicted RBP22.34■■□□□ 1.17
CSGALNACT1-208ENST00000520003 ANKRD24Q8TF21 1146 aa22.34■■□□□ 1.17
CSGALNACT1-208ENST00000520003 EDC4Q6P2E9 1401 aaKnown RBP22.33■■□□□ 1.17
CSGALNACT1-208ENST00000520003 LTN1O94822 1766 aa22.33■■□□□ 1.17
CSGALNACT1-208ENST00000520003 LRRC4BQ9NT99 713 aa22.33■■□□□ 1.17
CSGALNACT1-208ENST00000520003 BTAF1O14981 1849 aa22.33■■□□□ 1.16
CSGALNACT1-208ENST00000520003 ZNF827Q17R98 1081 aa22.32■■□□□ 1.16
CSGALNACT1-208ENST00000520003 ARXQ96QS3 562 aa22.31■■□□□ 1.16
CSGALNACT1-208ENST00000520003 SLC12A5Q9H2X9 1139 aa22.31■■□□□ 1.16
CSGALNACT1-208ENST00000520003 HDGFL2Q7Z4V5 671 aaPredicted RBP22.3■■□□□ 1.16
CSGALNACT1-208ENST00000520003 A0A1W2PP64 1363 aa22.29■■□□□ 1.16
CSGALNACT1-208ENST00000520003 CARD11Q9BXL7 1154 aa22.29■■□□□ 1.16
CSGALNACT1-208ENST00000520003 AKT1S1Q96B36 256 aa22.28■■□□□ 1.16
CSGALNACT1-208ENST00000520003 PUS7Q96PZ0 661 aaKnown RBP22.28■■□□□ 1.16
CSGALNACT1-208ENST00000520003 TMC1Q8TDI8 760 aa22.27■■□□□ 1.16
CSGALNACT1-208ENST00000520003 IP6K1Q92551 441 aa22.27■■□□□ 1.16
CSGALNACT1-208ENST00000520003 TERF2IPQ9NYB0 399 aa22.26■■□□□ 1.15
CSGALNACT1-208ENST00000520003 SLC27A3Q5K4L6 730 aa22.25■■□□□ 1.15
CSGALNACT1-208ENST00000520003 SLC16A10Q8TF71 515 aa22.25■■□□□ 1.15
CSGALNACT1-208ENST00000520003 QSER1Q2KHR3 1735 aa22.24■■□□□ 1.15
CSGALNACT1-208ENST00000520003 TONSLQ96HA7 1378 aa22.24■■□□□ 1.15
CSGALNACT1-208ENST00000520003 FAM208AQ9UK61 1670 aaKnown RBP22.23■■□□□ 1.15
CSGALNACT1-208ENST00000520003 COL24A1Q17RW2 1714 aa22.23■■□□□ 1.15
CSGALNACT1-208ENST00000520003 CHD4Q14839 1912 aa22.22■■□□□ 1.15
CSGALNACT1-208ENST00000520003 PNPLA7Q6ZV29 1317 aa22.22■■□□□ 1.15
CSGALNACT1-208ENST00000520003 DDX54Q8TDD1 881 aaKnown RBP22.21■■□□□ 1.15
CSGALNACT1-208ENST00000520003 NSD2O96028 1365 aa22.21■■□□□ 1.15
CSGALNACT1-208ENST00000520003 ANKRD36BQ8N2N9 1353 aa22.2■■□□□ 1.14
CSGALNACT1-208ENST00000520003 MAP3K19Q56UN5 1328 aa22.19■■□□□ 1.14
CSGALNACT1-208ENST00000520003 TESK2Q96S53 571 aa22.18■■□□□ 1.14
CSGALNACT1-208ENST00000520003 HOXC9P31274 260 aa22.17■■□□□ 1.14
CSGALNACT1-208ENST00000520003 PRIM1P49642 420 aaKnown RBP22.17■■□□□ 1.14
CSGALNACT1-208ENST00000520003 LTV1Q96GA3 475 aaPredicted RBP22.17■■□□□ 1.14
CSGALNACT1-208ENST00000520003 LY75O60449 1722 aa22.16■■□□□ 1.14
CSGALNACT1-208ENST00000520003 SHANK3Q9BYB0 1731 aa22.16■■□□□ 1.14
CSGALNACT1-208ENST00000520003 TUBGCP6Q96RT7 1819 aa22.15■■□□□ 1.14
CSGALNACT1-208ENST00000520003 KAT6BQ8WYB5 2073 aa22.15■■□□□ 1.14
CSGALNACT1-208ENST00000520003 KCNQ4P56696 695 aa22.15■■□□□ 1.14
CSGALNACT1-208ENST00000520003 C1QTNF8P60827 252 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms