RNA–Protein interactions for RNA: ENST00000519811.5

DENND3-211, Transcript of DENN domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DENND3, Length 5,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-211ENST00000519811 KIF14Q15058 1648 aa16.57■□□□□ 0.24
DENND3-211ENST00000519811 DDX54Q8TDD1 881 aaKnown RBP16.57■□□□□ 0.24
DENND3-211ENST00000519811 KIF7Q2M1P5 1343 aa16.56■□□□□ 0.24
DENND3-211ENST00000519811 ERC1Q8IUD2 1116 aa16.56■□□□□ 0.24
DENND3-211ENST00000519811 NEUROD6Q96NK8 337 aa16.56■□□□□ 0.24
DENND3-211ENST00000519811 BRD4O60885 1362 aaPredicted RBP16.56■□□□□ 0.24
DENND3-211ENST00000519811 TSPY26PQ9H489 355 aa16.56■□□□□ 0.24
DENND3-211ENST00000519811 RALYLQ86SE5 291 aaKnown RBP16.56■□□□□ 0.24
DENND3-211ENST00000519811 CAVIN1Q6NZI2 390 aaKnown RBP16.55■□□□□ 0.24
DENND3-211ENST00000519811 PPP1R1BQ9UD71 204 aaPredicted RBP16.55■□□□□ 0.24
DENND3-211ENST00000519811 PRKAR2BP31323 418 aa16.54■□□□□ 0.24
DENND3-211ENST00000519811 NFXL1Q6ZNB6 911 aa16.54■□□□□ 0.24
DENND3-211ENST00000519811 CCDC27Q2M243 656 aa16.54■□□□□ 0.24
DENND3-211ENST00000519811 AXDND1Q5T1B0 1012 aaPredicted RBP16.54■□□□□ 0.24
DENND3-211ENST00000519811 CCAR1Q8IX12 1150 aaKnown RBP16.54■□□□□ 0.24
DENND3-211ENST00000519811 CLASRPQ8N2M8 674 aaKnown RBP16.53■□□□□ 0.24
DENND3-211ENST00000519811 CADPS2Q86UW7 1296 aa16.53■□□□□ 0.24
DENND3-211ENST00000519811 NINLQ9Y2I6 1382 aa16.53■□□□□ 0.24
DENND3-211ENST00000519811 PLIN1O60240 522 aa16.53■□□□□ 0.24
DENND3-211ENST00000519811 SAFBQ15424 915 aaKnown RBP eCLIP16.53■□□□□ 0.24
DENND3-211ENST00000519811 INCENPQ9NQS7 918 aa16.53■□□□□ 0.24
DENND3-211ENST00000519811 COG6Q9Y2V7 657 aa16.53■□□□□ 0.24
DENND3-211ENST00000519811 TOM1O60784 492 aa16.53■□□□□ 0.24
DENND3-211ENST00000519811 SART3Q15020 963 aaKnown RBP16.52■□□□□ 0.24
DENND3-211ENST00000519811 NUDT16Q96DE0 195 aaKnown RBP16.52■□□□□ 0.24
DENND3-211ENST00000519811 HOOK1Q9UJC3 728 aaKnown RBP16.52■□□□□ 0.24
DENND3-211ENST00000519811 HIP1O00291 1037 aa16.52■□□□□ 0.23
DENND3-211ENST00000519811 STARD3NLO95772 234 aa16.52■□□□□ 0.23
DENND3-211ENST00000519811 WASHC4Q2M389 1173 aa16.52■□□□□ 0.23
DENND3-211ENST00000519811 ZNF652Q9Y2D9 606 aa16.52■□□□□ 0.23
DENND3-211ENST00000519811 ARHGEF11O15085 1522 aa16.51■□□□□ 0.23
DENND3-211ENST00000519811 CENPHQ9H3R5 247 aa16.51■□□□□ 0.23
DENND3-211ENST00000519811 EIF3JO75822 258 aaKnown RBP16.51■□□□□ 0.23
DENND3-211ENST00000519811 XBP1P17861 261 aa16.51■□□□□ 0.23
DENND3-211ENST00000519811 PES1O00541 588 aaKnown RBP16.51■□□□□ 0.23
DENND3-211ENST00000519811 SULT6B1Q6IMI4 303 aa16.51■□□□□ 0.23
DENND3-211ENST00000519811 ANO2Q9NQ90 1003 aa16.51■□□□□ 0.23
DENND3-211ENST00000519811 PPP4R3BQ5MIZ7 849 aa16.51■□□□□ 0.23
DENND3-211ENST00000519811 HDGFL1Q5TGJ6 251 aa16.5■□□□□ 0.23
DENND3-211ENST00000519811 BRMS1Q9HCU9 246 aa16.5■□□□□ 0.23
DENND3-211ENST00000519811 ZRSR2Q15696 482 aaKnown RBP16.5■□□□□ 0.23
DENND3-211ENST00000519811 TIAM1Q13009 1591 aa16.5■□□□□ 0.23
DENND3-211ENST00000519811 IPO7O95373 1038 aaKnown RBP16.5■□□□□ 0.23
DENND3-211ENST00000519811 CNNM1Q9NRU3 951 aa16.5■□□□□ 0.23
DENND3-211ENST00000519811 CCP110O43303 1012 aa16.5■□□□□ 0.23
DENND3-211ENST00000519811 CT47B1P0C2W7 299 aaPredicted RBP16.5■□□□□ 0.23
DENND3-211ENST00000519811 INTS3Q68E01 1043 aaKnown RBP16.49■□□□□ 0.23
DENND3-211ENST00000519811 GTPBP4Q9BZE4 634 aaKnown RBP16.49■□□□□ 0.23
DENND3-211ENST00000519811 GOLGA6L7A0A1B0GV03 622 aa16.49■□□□□ 0.23
DENND3-211ENST00000519811 PHF8Q9UPP1 1060 aa16.49■□□□□ 0.23
DENND3-211ENST00000519811 FANCAO15360 1455 aa16.49■□□□□ 0.23
DENND3-211ENST00000519811 CCDC158Q5M9N0 1113 aa16.49■□□□□ 0.23
DENND3-211ENST00000519811 TCP11L2Q8N4U5 519 aa16.49■□□□□ 0.23
DENND3-211ENST00000519811 NGLY1Q96IV0 654 aa16.49■□□□□ 0.23
DENND3-211ENST00000519811 C22orf23Q9BZE7 217 aa16.48■□□□□ 0.23
DENND3-211ENST00000519811 SLC12A5Q9H2X9 1139 aa16.48■□□□□ 0.23
DENND3-211ENST00000519811 TICAM2Q86XR7 235 aa16.48■□□□□ 0.23
DENND3-211ENST00000519811 ANKRD20A12PQ8NF67 263 aa16.48■□□□□ 0.23
DENND3-211ENST00000519811 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.48■□□□□ 0.23
DENND3-211ENST00000519811 DYNC1I1O14576 645 aa16.47■□□□□ 0.23
DENND3-211ENST00000519811 AMOTQ4VCS5 1084 aa16.47■□□□□ 0.23
DENND3-211ENST00000519811 SSR1P43307 286 aaKnown RBP16.47■□□□□ 0.23
DENND3-211ENST00000519811 FAM177BA6PVY3 158 aa16.47■□□□□ 0.23
DENND3-211ENST00000519811 MBD3O95983 291 aa16.47■□□□□ 0.23
DENND3-211ENST00000519811 PPP2R1AP30153 589 aa16.47■□□□□ 0.23
DENND3-211ENST00000519811 AMOTL2Q9Y2J4 779 aa16.47■□□□□ 0.23
DENND3-211ENST00000519811 CCT4P50991 539 aaKnown RBP16.46■□□□□ 0.23
DENND3-211ENST00000519811 CNTROBQ8N137 903 aa16.46■□□□□ 0.23
DENND3-211ENST00000519811 MPHOSPH8Q99549 860 aa16.46■□□□□ 0.23
DENND3-211ENST00000519811 CDK13Q14004 1512 aaKnown RBP16.46■□□□□ 0.23
DENND3-211ENST00000519811 WDHD1O75717 1129 aaPredicted RBP16.46■□□□□ 0.23
DENND3-211ENST00000519811 DDX11Q96FC9 970 aa16.46■□□□□ 0.23
DENND3-211ENST00000519811 TRIM5Q9C035 493 aa16.46■□□□□ 0.23
DENND3-211ENST00000519811 PRM3Q9NNZ6 103 aa16.46■□□□□ 0.23
DENND3-211ENST00000519811 TWISTNBQ3B726 338 aaPredicted RBP16.46■□□□□ 0.23
DENND3-211ENST00000519811 CT47A1Q5JQC4 288 aaPredicted RBP16.46■□□□□ 0.23
DENND3-211ENST00000519811 URB2Q14146 1524 aaKnown RBP16.46■□□□□ 0.22
DENND3-211ENST00000519811 TDO2P48775 406 aa16.46■□□□□ 0.22
DENND3-211ENST00000519811 NBPF1Q3BBV0 1214 aa16.46■□□□□ 0.22
DENND3-211ENST00000519811 DHX37Q8IY37 1157 aaKnown RBP16.46■□□□□ 0.22
DENND3-211ENST00000519811 BICD2Q8TD16 824 aa16.46■□□□□ 0.22
DENND3-211ENST00000519811 IKQ13123 557 aaPredicted RBP16.45■□□□□ 0.22
DENND3-211ENST00000519811 PSMA5P28066 241 aa16.45■□□□□ 0.22
DENND3-211ENST00000519811 ZC3H6P61129 1189 aaKnown RBP16.45■□□□□ 0.22
DENND3-211ENST00000519811 TTLL5Q6EMB2 1281 aa16.45■□□□□ 0.22
DENND3-211ENST00000519811 MSH6P52701 1360 aa16.45■□□□□ 0.22
DENND3-211ENST00000519811 TNRQ92752 1358 aa16.45■□□□□ 0.22
DENND3-211ENST00000519811 GTF2F1P35269 517 aaKnown RBP eCLIP16.45■□□□□ 0.22
DENND3-211ENST00000519811 ERLIN1O75477 346 aa16.44■□□□□ 0.22
DENND3-211ENST00000519811 ZSCAN25Q6NSZ9 544 aa16.44■□□□□ 0.22
DENND3-211ENST00000519811 SMAP1Q8IYB5 467 aaPredicted RBP16.44■□□□□ 0.22
DENND3-211ENST00000519811 SPC24Q8NBT2 197 aa16.44■□□□□ 0.22
DENND3-211ENST00000519811 ZNF428Q96B54 188 aa16.44■□□□□ 0.22
DENND3-211ENST00000519811 TMOD3Q9NYL9 352 aa16.44■□□□□ 0.22
DENND3-211ENST00000519811 FCHSD2O94868 740 aa16.44■□□□□ 0.22
DENND3-211ENST00000519811 CAGE1Q8TC20 777 aa16.44■□□□□ 0.22
DENND3-211ENST00000519811 CAMSAP2Q08AD1 1489 aa16.43■□□□□ 0.22
DENND3-211ENST00000519811 CNKSR2Q8WXI2 1034 aa16.43■□□□□ 0.22
DENND3-211ENST00000519811 PEG3Q9GZU2 1588 aa16.43■□□□□ 0.22
DENND3-211ENST00000519811 DHX29Q7Z478 1369 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 169 ms