RNA–Protein interactions for RNA: ENST00000519486.5

SLIT3-205, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 4,228 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-205ENST00000519486 SLC4A10Q6U841 1118 aa9.59□□□□□ -0.87
SLIT3-205ENST00000519486 AFF2P51816 1311 aa9.59□□□□□ -0.87
SLIT3-205ENST00000519486 NOS1P29475 1434 aa9.59□□□□□ -0.87
SLIT3-205ENST00000519486 MYO5CQ9NQX4 1742 aa9.58□□□□□ -0.88
SLIT3-205ENST00000519486 PRKAR2BP31323 418 aa9.58□□□□□ -0.88
SLIT3-205ENST00000519486 WDR63Q8IWG1 891 aa9.58□□□□□ -0.88
SLIT3-205ENST00000519486 COL17A1Q9UMD9 1497 aaPredicted RBP9.58□□□□□ -0.88
SLIT3-205ENST00000519486 PLEKHO1Q53GL0 409 aaPredicted RBP9.58□□□□□ -0.88
SLIT3-205ENST00000519486 NKTRP30414 1462 aaKnown RBP9.58□□□□□ -0.88
SLIT3-205ENST00000519486 WASLO00401 505 aaPredicted RBP9.58□□□□□ -0.88
SLIT3-205ENST00000519486 AAMPQ13685 434 aa9.58□□□□□ -0.88
SLIT3-205ENST00000519486 APBA3O96018 575 aa9.58□□□□□ -0.88
SLIT3-205ENST00000519486 KDM5DQ9BY66 1539 aa9.57□□□□□ -0.88
SLIT3-205ENST00000519486 NOB1Q9ULX3 412 aaKnown RBP9.57□□□□□ -0.88
SLIT3-205ENST00000519486 LTKP29376 864 aa9.57□□□□□ -0.88
SLIT3-205ENST00000519486 CCDC125Q86Z20 511 aa9.57□□□□□ -0.88
SLIT3-205ENST00000519486 AK7Q96M32 723 aa9.57□□□□□ -0.88
SLIT3-205ENST00000519486 KDM5CP41229 1560 aa9.57□□□□□ -0.88
SLIT3-205ENST00000519486 GPR162Q16538 588 aa9.57□□□□□ -0.88
SLIT3-205ENST00000519486 C22orf23Q9BZE7 217 aa9.57□□□□□ -0.88
SLIT3-205ENST00000519486 R3HCC1Q9Y3T6 440 aaKnown RBP9.57□□□□□ -0.88
SLIT3-205ENST00000519486 HSP90B1P14625 803 aaKnown RBP9.56□□□□□ -0.88
SLIT3-205ENST00000519486 FAM196AQ6ZSG2 479 aa9.56□□□□□ -0.88
SLIT3-205ENST00000519486 RBM42Q9BTD8 480 aaKnown RBP9.56□□□□□ -0.88
SLIT3-205ENST00000519486 ARHGEF40Q8TER5 1519 aa9.56□□□□□ -0.88
SLIT3-205ENST00000519486 SETD1BQ9UPS6 1966 aaKnown RBP9.56□□□□□ -0.88
SLIT3-205ENST00000519486 DDX11L8A8MPP1 907 aa9.56□□□□□ -0.88
SLIT3-205ENST00000519486 LMOD3Q0VAK6 560 aa9.56□□□□□ -0.88
SLIT3-205ENST00000519486 KRT27Q7Z3Y8 459 aa9.56□□□□□ -0.88
SLIT3-205ENST00000519486 GBP4Q96PP9 640 aa9.56□□□□□ -0.88
SLIT3-205ENST00000519486 C1orf115Q9H7X2 142 aa9.56□□□□□ -0.88
SLIT3-205ENST00000519486 TMPOP42166 694 aaKnown RBP9.56□□□□□ -0.88
SLIT3-205ENST00000519486 MVPQ14764 893 aaKnown RBP9.56□□□□□ -0.88
SLIT3-205ENST00000519486 SMARCC1Q92922 1105 aaPredicted RBP9.56□□□□□ -0.88
SLIT3-205ENST00000519486 C14orf93Q9H972 538 aaKnown RBP9.56□□□□□ -0.88
SLIT3-205ENST00000519486 BTG4Q9NY30 223 aa9.56□□□□□ -0.88
SLIT3-205ENST00000519486 KIF16BQ96L93 1317 aa9.56□□□□□ -0.88
SLIT3-205ENST00000519486 ADGBQ8N7X0 1667 aa9.56□□□□□ -0.88
SLIT3-205ENST00000519486 ZHX1Q9UKY1 873 aaPredicted RBP9.55□□□□□ -0.88
SLIT3-205ENST00000519486 TNNQ9UQP3 1299 aa9.55□□□□□ -0.88
SLIT3-205ENST00000519486 PLEKHG1Q9ULL1 1385 aa9.55□□□□□ -0.88
SLIT3-205ENST00000519486 BCORL1Q5H9F3 1711 aa9.55□□□□□ -0.88
SLIT3-205ENST00000519486 ASXL1Q8IXJ9 1541 aa9.55□□□□□ -0.88
SLIT3-205ENST00000519486 PTMSP20962 102 aa9.55□□□□□ -0.88
SLIT3-205ENST00000519486 FBLN1P23142 703 aa9.55□□□□□ -0.88
SLIT3-205ENST00000519486 ATF7IPQ6VMQ6 1270 aa9.55□□□□□ -0.88
SLIT3-205ENST00000519486 THUMPD2Q9BTF0 503 aaKnown RBP9.55□□□□□ -0.88
SLIT3-205ENST00000519486 ABCA9Q8IUA7 1624 aa9.55□□□□□ -0.88
SLIT3-205ENST00000519486 SSH1Q8WYL5 1049 aa9.54□□□□□ -0.88
SLIT3-205ENST00000519486 AGLP35573 1532 aa9.54□□□□□ -0.88
SLIT3-205ENST00000519486 EFCAB6Q5THR3 1501 aa9.53□□□□□ -0.88
SLIT3-205ENST00000519486 FAM98CQ17RN3 349 aaKnown RBP9.53□□□□□ -0.88
SLIT3-205ENST00000519486 PCDHB15Q9Y5E8 787 aa9.53□□□□□ -0.88
SLIT3-205ENST00000519486 TRAK2O60296 914 aa9.53□□□□□ -0.88
SLIT3-205ENST00000519486 GNAI1P63096 354 aa9.53□□□□□ -0.88
SLIT3-205ENST00000519486 CHRNA2Q15822 529 aa9.53□□□□□ -0.88
SLIT3-205ENST00000519486 TFCP2L1Q9NZI6 479 aa9.53□□□□□ -0.88
SLIT3-205ENST00000519486 C8orf34Q49A92 452 aa9.52□□□□□ -0.88
SLIT3-205ENST00000519486 TMEM57Q8N5G2 664 aa9.52□□□□□ -0.88
SLIT3-205ENST00000519486 PLA2R1Q13018 1463 aa9.52□□□□□ -0.88
SLIT3-205ENST00000519486 SOCS7O14512 581 aa9.52□□□□□ -0.89
SLIT3-205ENST00000519486 RLBP1P12271 317 aa9.52□□□□□ -0.89
SLIT3-205ENST00000519486 OS9Q13438 667 aaPredicted RBP9.52□□□□□ -0.89
SLIT3-205ENST00000519486 NECTIN2Q92692 538 aa9.52□□□□□ -0.89
SLIT3-205ENST00000519486 STK31Q9BXU1 1019 aa9.52□□□□□ -0.89
SLIT3-205ENST00000519486 GRPEL1Q9HAV7 217 aa9.52□□□□□ -0.89
SLIT3-205ENST00000519486 PRDM10Q9NQV6 1147 aa9.52□□□□□ -0.89
SLIT3-205ENST00000519486 ABCC1P33527 1531 aa9.52□□□□□ -0.89
SLIT3-205ENST00000519486 RIMS1Q86UR5 1692 aaKnown RBP9.52□□□□□ -0.89
SLIT3-205ENST00000519486 ISY1Q9ULR0 285 aaKnown RBP9.51□□□□□ -0.89
SLIT3-205ENST00000519486 HDAC5Q9UQL6 1122 aa9.51□□□□□ -0.89
SLIT3-205ENST00000519486 CABP4P57796 275 aa9.51□□□□□ -0.89
SLIT3-205ENST00000519486 CSPP1Q1MSJ5 1256 aa9.51□□□□□ -0.89
SLIT3-205ENST00000519486 CHMP5Q9NZZ3 219 aa9.51□□□□□ -0.89
SLIT3-205ENST00000519486 XRCC6P12956 609 aaKnown RBP eCLIP9.51□□□□□ -0.89
SLIT3-205ENST00000519486 RRS1Q15050 365 aaKnown RBP9.51□□□□□ -0.89
SLIT3-205ENST00000519486 NOL8Q76FK4 1167 aaKnown RBP9.51□□□□□ -0.89
SLIT3-205ENST00000519486 UNC5CLQ8IV45 518 aa9.51□□□□□ -0.89
SLIT3-205ENST00000519486 SAMD9LQ8IVG5 1584 aa9.51□□□□□ -0.89
SLIT3-205ENST00000519486 CHAF1AQ13111 956 aaPredicted RBP9.51□□□□□ -0.89
SLIT3-205ENST00000519486 ZNF771Q7L3S4 317 aaPredicted RBP9.51□□□□□ -0.89
SLIT3-205ENST00000519486 TMOD3Q9NYL9 352 aa9.51□□□□□ -0.89
SLIT3-205ENST00000519486 NINLQ9Y2I6 1382 aa9.51□□□□□ -0.89
SLIT3-205ENST00000519486 TRIM27P14373 513 aa9.5□□□□□ -0.89
SLIT3-205ENST00000519486 ORAI2Q96SN7 254 aa9.5□□□□□ -0.89
SLIT3-205ENST00000519486 API5Q9BZZ5 524 aaKnown RBP9.5□□□□□ -0.89
SLIT3-205ENST00000519486 ZPR1O75312 459 aa9.5□□□□□ -0.89
SLIT3-205ENST00000519486 WDHD1O75717 1129 aaPredicted RBP9.5□□□□□ -0.89
SLIT3-205ENST00000519486 SKOR2Q2VWA4 1001 aaPredicted RBP9.5□□□□□ -0.89
SLIT3-205ENST00000519486 TWISTNBQ3B726 338 aaPredicted RBP9.5□□□□□ -0.89
SLIT3-205ENST00000519486 EIF2AK4Q9P2K8 1649 aaKnown RBP9.5□□□□□ -0.89
SLIT3-205ENST00000519486 TRIM6-TRIM34B2RNG4 842 aa9.5□□□□□ -0.89
SLIT3-205ENST00000519486 TNNT3P45378 269 aaPredicted RBP9.5□□□□□ -0.89
SLIT3-205ENST00000519486 TAF7LQ5H9L4 462 aa9.5□□□□□ -0.89
SLIT3-205ENST00000519486 FOXD4L5Q5VV16 416 aaPredicted RBP9.5□□□□□ -0.89
SLIT3-205ENST00000519486 FLAD1Q8NFF5 587 aa9.5□□□□□ -0.89
SLIT3-205ENST00000519486 FOXD4L4Q8WXT5 416 aaPredicted RBP9.5□□□□□ -0.89
SLIT3-205ENST00000519486 PIK3C2GO75747 1445 aa9.5□□□□□ -0.89
SLIT3-205ENST00000519486 ARHGEF5Q12774 1597 aa9.5□□□□□ -0.89
SLIT3-205ENST00000519486 CFAP65Q6ZU64 1925 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms