RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 PIK3C2AO00443 1686 aa15.4■□□□□ 0.06
PVT1-208ENST00000519481 WDR17Q8IZU2 1322 aa15.4■□□□□ 0.06
PVT1-208ENST00000519481 NBPF14Q5TI25 921 aa15.39■□□□□ 0.05
PVT1-208ENST00000519481 HDGFL2Q7Z4V5 671 aaPredicted RBP15.39■□□□□ 0.05
PVT1-208ENST00000519481 CPSF1Q10570 1443 aaKnown RBP15.39■□□□□ 0.05
PVT1-208ENST00000519481 OVOS2A0A0G2JMS6 1433 aa15.38■□□□□ 0.05
PVT1-208ENST00000519481 OVOS2A0A0J9YW53 1432 aa15.38■□□□□ 0.05
PVT1-208ENST00000519481 OVOS2Q6IE36 1432 aa15.38■□□□□ 0.05
PVT1-208ENST00000519481 AKAP12Q02952 1782 aa15.38■□□□□ 0.05
PVT1-208ENST00000519481 LRP5O75197 1615 aa15.38■□□□□ 0.05
PVT1-208ENST00000519481 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.37■□□□□ 0.051e-6■□□□□ 11.1
PVT1-208ENST00000519481 AXIN2Q9Y2T1 843 aa15.37■□□□□ 0.05
PVT1-208ENST00000519481 PARP4Q9UKK3 1724 aaKnown RBP15.37■□□□□ 0.05
PVT1-208ENST00000519481 SLC24A1O60721 1099 aa15.36■□□□□ 0.05
PVT1-208ENST00000519481 CARD10Q9BWT7 1032 aa15.36■□□□□ 0.05
PVT1-208ENST00000519481 TERF2IPQ9NYB0 399 aa15.36■□□□□ 0.05
PVT1-208ENST00000519481 PUS7Q96PZ0 661 aaKnown RBP15.34■□□□□ 0.05
PVT1-208ENST00000519481 USP31Q70CQ4 1352 aa15.34■□□□□ 0.05
PVT1-208ENST00000519481 COL18A1P39060 1754 aa15.34■□□□□ 0.05
PVT1-208ENST00000519481 EXOC5O00471 708 aa15.33■□□□□ 0.04
PVT1-208ENST00000519481 SLC12A5Q9H2X9 1139 aa15.33■□□□□ 0.04
PVT1-208ENST00000519481 CCDC7Q96M83 1385 aa15.33■□□□□ 0.04
PVT1-208ENST00000519481 TRIM26Q12899 539 aaPredicted RBP15.32■□□□□ 0.04
PVT1-208ENST00000519481 NME9Q86XW9 330 aa15.32■□□□□ 0.04
PVT1-208ENST00000519481 NFAT5O94916 1531 aa15.32■□□□□ 0.04
PVT1-208ENST00000519481 MON2Q7Z3U7 1717 aa15.31■□□□□ 0.04
PVT1-208ENST00000519481 PLSCR1O15162 318 aa15.31■□□□□ 0.04
PVT1-208ENST00000519481 BCL11BQ9C0K0 894 aaPredicted RBP15.31■□□□□ 0.04
PVT1-208ENST00000519481 EDC4Q6P2E9 1401 aaKnown RBP15.31■□□□□ 0.04
PVT1-208ENST00000519481 ABCC6O95255 1503 aa15.31■□□□□ 0.04
PVT1-208ENST00000519481 LRRC37A3O60309 1634 aa15.3■□□□□ 0.04
PVT1-208ENST00000519481 MARCH10Q8NA82 808 aaPredicted RBP15.3■□□□□ 0.04
PVT1-208ENST00000519481 NLRP2Q9NX02 1062 aa15.3■□□□□ 0.04
PVT1-208ENST00000519481 RREB1Q92766 1687 aa15.29■□□□□ 0.04
PVT1-208ENST00000519481 NINLQ9Y2I6 1382 aa15.29■□□□□ 0.04
PVT1-208ENST00000519481 CD163L1Q9NR16 1453 aa15.28■□□□□ 0.04
PVT1-208ENST00000519481 ERBB3P21860 1342 aa15.28■□□□□ 0.04
PVT1-208ENST00000519481 ST20-MTHFSA0A0A6YYL1 179 aa15.28■□□□□ 0.04
PVT1-208ENST00000519481 RGPD5Q99666 1765 aa15.28■□□□□ 0.04
PVT1-208ENST00000519481 BCL9O00512 1426 aa15.27■□□□□ 0.04
PVT1-208ENST00000519481 A0A1W2PP64 1363 aa15.27■□□□□ 0.04
PVT1-208ENST00000519481 NUP188Q5SRE5 1749 aa15.27■□□□□ 0.04
PVT1-208ENST00000519481 PEAK1Q9H792 1746 aa15.27■□□□□ 0.04
PVT1-208ENST00000519481 IL2RBP14784 551 aa15.26■□□□□ 0.03
PVT1-208ENST00000519481 ANKRD24Q8TF21 1146 aa15.26■□□□□ 0.03
PVT1-208ENST00000519481 SPON1Q9HCB6 807 aa15.26■□□□□ 0.03
PVT1-208ENST00000519481 WNK3Q9BYP7 1800 aa15.26■□□□□ 0.03
PVT1-208ENST00000519481 COG3Q96JB2 828 aa15.25■□□□□ 0.03
PVT1-208ENST00000519481 TESK2Q96S53 571 aa15.25■□□□□ 0.03
PVT1-208ENST00000519481 PPP1R1BQ9UD71 204 aaPredicted RBP15.25■□□□□ 0.03
PVT1-208ENST00000519481 USP54Q70EL1 1684 aa15.25■□□□□ 0.03
PVT1-208ENST00000519481 TNS2Q63HR2 1409 aa15.25■□□□□ 0.03
PVT1-208ENST00000519481 SBF2Q86WG5 1849 aa15.24■□□□□ 0.03
PVT1-208ENST00000519481 TMF1P82094 1093 aa15.24■□□□□ 0.03
PVT1-208ENST00000519481 RGPD3A6NKT7 1758 aaPredicted RBP15.24■□□□□ 0.03
PVT1-208ENST00000519481 RGPD4Q7Z3J3 1758 aa15.24■□□□□ 0.03
PVT1-208ENST00000519481 KCNQ2O43526 872 aa15.23■□□□□ 0.03
PVT1-208ENST00000519481 IP6K1Q92551 441 aa15.23■□□□□ 0.03
PVT1-208ENST00000519481 PTF1AQ7RTS3 328 aa15.22■□□□□ 0.03
PVT1-208ENST00000519481 LTN1O94822 1766 aa15.21■□□□□ 0.03
PVT1-208ENST00000519481 DCAF8L1A6NGE4 600 aa15.21■□□□□ 0.03
PVT1-208ENST00000519481 AMPHP49418 695 aa15.21■□□□□ 0.03
PVT1-208ENST00000519481 TXNRD1Q16881 649 aa15.21■□□□□ 0.03
PVT1-208ENST00000519481 CDCA8Q53HL2 280 aa15.21■□□□□ 0.03
PVT1-208ENST00000519481 LTV1Q96GA3 475 aaPredicted RBP15.21■□□□□ 0.03
PVT1-208ENST00000519481 STK32BQ9NY57 414 aa15.21■□□□□ 0.03
PVT1-208ENST00000519481 ACSBG1Q96GR2 724 aa15.2■□□□□ 0.02
PVT1-208ENST00000519481 ANO8Q9HCE9 1232 aaPredicted RBP15.2■□□□□ 0.02
PVT1-208ENST00000519481 ANKRD36BQ8N2N9 1353 aa15.2■□□□□ 0.02
PVT1-208ENST00000519481 USP47Q96K76 1375 aa15.2■□□□□ 0.02
PVT1-208ENST00000519481 PROM2Q8N271 834 aa15.19■□□□□ 0.02
PVT1-208ENST00000519481 MAP3K19Q56UN5 1328 aa15.17■□□□□ 0.02
PVT1-208ENST00000519481 HOXC9P31274 260 aa15.17■□□□□ 0.02
PVT1-208ENST00000519481 KAT6BQ8WYB5 2073 aa15.16■□□□□ 0.02
PVT1-208ENST00000519481 SLC15A2Q16348 729 aa15.16■□□□□ 0.02
PVT1-208ENST00000519481 DDX54Q8TDD1 881 aaKnown RBP15.16■□□□□ 0.02
PVT1-208ENST00000519481 TIMELESSQ9UNS1 1208 aa15.16■□□□□ 0.02
PVT1-208ENST00000519481 NHSQ6T4R5 1651 aa15.15■□□□□ 0.02
PVT1-208ENST00000519481 FAM208AQ9UK61 1670 aaKnown RBP15.15■□□□□ 0.02
PVT1-208ENST00000519481 RTL1A6NKG5 1358 aa15.14■□□□□ 0.01
PVT1-208ENST00000519481 ZBTB7AO95365 584 aa15.14■□□□□ 0.01
PVT1-208ENST00000519481 GGNBP2Q9H3C7 697 aa15.14■□□□□ 0.01
PVT1-208ENST00000519481 FYB1O15117 783 aa15.13■□□□□ 0.01
PVT1-208ENST00000519481 SMG6Q86US8 1419 aaKnown RBP15.13■□□□□ 0.01
PVT1-208ENST00000519481 FBLN1P23142 703 aa15.12■□□□□ 0.01
PVT1-208ENST00000519481 RRS1Q15050 365 aaKnown RBP15.12■□□□□ 0.01
PVT1-208ENST00000519481 ZCRB1Q8TBF4 217 aaKnown RBP15.12■□□□□ 0.01
PVT1-208ENST00000519481 ATF5Q9Y2D1 282 aaPredicted RBP15.12■□□□□ 0.01
PVT1-208ENST00000519481 CLSPNQ9HAW4 1339 aa15.12■□□□□ 0.01
PVT1-208ENST00000519481 RAPGEF4Q8WZA2 1011 aa15.11■□□□□ 0.01
PVT1-208ENST00000519481 SYTL4Q96C24 671 aaPredicted RBP15.11■□□□□ 0.01
PVT1-208ENST00000519481 PDGFDQ9GZP0 370 aaPredicted RBP15.11■□□□□ 0.01
PVT1-208ENST00000519481 SLC27A3Q5K4L6 730 aa15.1■□□□□ 0.01
PVT1-208ENST00000519481 PCGF6Q9BYE7 350 aa15.1■□□□□ 0.01
PVT1-208ENST00000519481 MTFR1LQ9H019 292 aa15.1■□□□□ 0.01
PVT1-208ENST00000519481 CASZ1Q86V15 1759 aa15.1■□□□□ 0.01
PVT1-208ENST00000519481 CGNL1Q0VF96 1302 aa15.1■□□□□ 0.01
PVT1-208ENST00000519481 BTAF1O14981 1849 aa15.08■□□□□ 0.01
PVT1-208ENST00000519481 TATP17735 454 aaPredicted RBP15.08■□□□□ 0
PVT1-208ENST00000519481 YY1P25490 414 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms