RNA–Protein interactions for RNA: ENST00000519207.5

SH2D4A-204, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SH2D4A, Length 1,984 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-204ENST00000519207 CLCN1P35523 988 aa12.85□□□□□ -0.35
SH2D4A-204ENST00000519207 TMPOP42166 694 aaKnown RBP12.85□□□□□ -0.35
SH2D4A-204ENST00000519207 SETD1AO15047 1707 aaKnown RBP12.85□□□□□ -0.35
SH2D4A-204ENST00000519207 ATP7BP35670 1465 aa12.84□□□□□ -0.35
SH2D4A-204ENST00000519207 CDC42BPGQ6DT37 1551 aa12.84□□□□□ -0.35
SH2D4A-204ENST00000519207 NCOA3Q9Y6Q9 1424 aa12.83□□□□□ -0.35
SH2D4A-204ENST00000519207 U2SURPO15042 1029 aaKnown RBP12.83□□□□□ -0.35
SH2D4A-204ENST00000519207 C14orf37Q86TY3 774 aa12.83□□□□□ -0.35
SH2D4A-204ENST00000519207 AMOTL2Q9Y2J4 779 aa12.83□□□□□ -0.35
SH2D4A-204ENST00000519207 PIK3R4Q99570 1358 aa12.83□□□□□ -0.36
SH2D4A-204ENST00000519207 DIAPH1O60610 1272 aaKnown RBP12.83□□□□□ -0.36
SH2D4A-204ENST00000519207 RLBP1P12271 317 aa12.83□□□□□ -0.36
SH2D4A-204ENST00000519207 HSP90AA2PQ14568 343 aaPredicted RBP12.83□□□□□ -0.36
SH2D4A-204ENST00000519207 C19orf44Q9H6X5 657 aa12.83□□□□□ -0.36
SH2D4A-204ENST00000519207 CABP1Q9NZU7 370 aa12.83□□□□□ -0.36
SH2D4A-204ENST00000519207 TRIM35Q9UPQ4 493 aa12.83□□□□□ -0.36
SH2D4A-204ENST00000519207 ZKSCAN2Q63HK3 967 aa12.82□□□□□ -0.36
SH2D4A-204ENST00000519207 PTPRUQ92729 1446 aa12.82□□□□□ -0.36
SH2D4A-204ENST00000519207 L1TD1Q5T7N2 865 aaKnown RBP12.81□□□□□ -0.36
SH2D4A-204ENST00000519207 MVPQ14764 893 aaKnown RBP12.81□□□□□ -0.36
SH2D4A-204ENST00000519207 CADPS2Q86UW7 1296 aa12.81□□□□□ -0.36
SH2D4A-204ENST00000519207 DIP2AQ14689 1571 aa12.8□□□□□ -0.36
SH2D4A-204ENST00000519207 FCHSD2O94868 740 aa12.8□□□□□ -0.36
SH2D4A-204ENST00000519207 SLC4A3P48751 1232 aa12.8□□□□□ -0.36
SH2D4A-204ENST00000519207 POTEAQ6S8J7 498 aa12.8□□□□□ -0.36
SH2D4A-204ENST00000519207 BCL2L13Q9BXK5 485 aa12.8□□□□□ -0.36
SH2D4A-204ENST00000519207 RWDD1Q9H446 243 aaPredicted RBP12.8□□□□□ -0.36
SH2D4A-204ENST00000519207 PODXL2Q9NZ53 605 aa12.8□□□□□ -0.36
SH2D4A-204ENST00000519207 DAXXQ9UER7 740 aaPredicted RBP12.8□□□□□ -0.36
SH2D4A-204ENST00000519207 PCDHB15Q9Y5E8 787 aa12.8□□□□□ -0.36
SH2D4A-204ENST00000519207 ATF3P18847 181 aa12.8□□□□□ -0.36
SH2D4A-204ENST00000519207 DZIP1LQ8IYY4 767 aaKnown RBP12.8□□□□□ -0.36
SH2D4A-204ENST00000519207 FSD2A1L4K1 749 aa12.79□□□□□ -0.36
SH2D4A-204ENST00000519207 NPM3O75607 178 aaKnown RBP12.78□□□□□ -0.36
SH2D4A-204ENST00000519207 RIPK4P57078 832 aa12.78□□□□□ -0.36
SH2D4A-204ENST00000519207 EXOSC9Q06265 439 aaKnown RBP12.78□□□□□ -0.36
SH2D4A-204ENST00000519207 FTSJ3Q8IY81 847 aaKnown RBP12.78□□□□□ -0.36
SH2D4A-204ENST00000519207 TSR2Q969E8 191 aaKnown RBP12.78□□□□□ -0.36
SH2D4A-204ENST00000519207 TNNQ9UQP3 1299 aa12.78□□□□□ -0.36
SH2D4A-204ENST00000519207 METP08581 1390 aa12.78□□□□□ -0.36
SH2D4A-204ENST00000519207 JCADQ9P266 1359 aa12.78□□□□□ -0.36
SH2D4A-204ENST00000519207 NRXN3Q9Y4C0 1643 aa12.78□□□□□ -0.36
SH2D4A-204ENST00000519207 PHLPP1O60346 1717 aa12.78□□□□□ -0.36
SH2D4A-204ENST00000519207 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.78□□□□□ -0.36
SH2D4A-204ENST00000519207 CPSF1Q10570 1443 aaKnown RBP12.78□□□□□ -0.36
SH2D4A-204ENST00000519207 WAPLQ7Z5K2 1190 aa12.78□□□□□ -0.36
SH2D4A-204ENST00000519207 SIRT1Q96EB6 747 aa12.78□□□□□ -0.36
SH2D4A-204ENST00000519207 SMC4Q9NTJ3 1288 aa12.78□□□□□ -0.36
SH2D4A-204ENST00000519207 MAP2P11137 1827 aaKnown RBP12.77□□□□□ -0.36
SH2D4A-204ENST00000519207 EDC4Q6P2E9 1401 aaKnown RBP12.77□□□□□ -0.36
SH2D4A-204ENST00000519207 HSP90AA1P07900 732 aaKnown RBP12.77□□□□□ -0.37
SH2D4A-204ENST00000519207 KNDC1Q76NI1 1749 aa12.76□□□□□ -0.37
SH2D4A-204ENST00000519207 POLKQ9UBT6 870 aa12.76□□□□□ -0.37
SH2D4A-204ENST00000519207 WASLO00401 505 aaPredicted RBP12.76□□□□□ -0.37
SH2D4A-204ENST00000519207 ATF7IPQ6VMQ6 1270 aa12.76□□□□□ -0.37
SH2D4A-204ENST00000519207 SSH1Q8WYL5 1049 aa12.76□□□□□ -0.37
SH2D4A-204ENST00000519207 ZNF428Q96B54 188 aa12.76□□□□□ -0.37
SH2D4A-204ENST00000519207 DDX19BQ9UMR2 479 aa12.76□□□□□ -0.37
SH2D4A-204ENST00000519207 TECPR2O15040 1411 aa12.75□□□□□ -0.37
SH2D4A-204ENST00000519207 AATKQ6ZMQ8 1374 aa12.75□□□□□ -0.37
SH2D4A-204ENST00000519207 TRIM27P14373 513 aa12.75□□□□□ -0.37
SH2D4A-204ENST00000519207 ALDH1L2Q3SY69 923 aa12.75□□□□□ -0.37
SH2D4A-204ENST00000519207 BRINP3Q76B58 766 aa12.75□□□□□ -0.37
SH2D4A-204ENST00000519207 PDZRN3Q9UPQ7 1066 aa12.75□□□□□ -0.37
SH2D4A-204ENST00000519207 COL16A1Q07092 1604 aaPredicted RBP12.75□□□□□ -0.37
SH2D4A-204ENST00000519207 PPIP5K1Q6PFW1 1433 aa12.75□□□□□ -0.37
SH2D4A-204ENST00000519207 USP19O94966 1318 aa12.75□□□□□ -0.37
SH2D4A-204ENST00000519207 KIF16BQ96L93 1317 aa12.75□□□□□ -0.37
SH2D4A-204ENST00000519207 IPO8O15397 1037 aaKnown RBP12.74□□□□□ -0.37
SH2D4A-204ENST00000519207 HDAC1Q13547 482 aaPredicted RBP12.74□□□□□ -0.37
SH2D4A-204ENST00000519207 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.74□□□□□ -0.37
SH2D4A-204ENST00000519207 BRPF1P55201 1214 aaPredicted RBP12.74□□□□□ -0.37
SH2D4A-204ENST00000519207 CDK12Q9NYV4 1490 aaPredicted RBP12.73□□□□□ -0.37
SH2D4A-204ENST00000519207 PLEKHG5O94827 1062 aa12.73□□□□□ -0.37
SH2D4A-204ENST00000519207 CALD1Q05682 793 aaKnown RBP12.73□□□□□ -0.37
SH2D4A-204ENST00000519207 MON2Q7Z3U7 1717 aa12.73□□□□□ -0.37
SH2D4A-204ENST00000519207 XRN1Q8IZH2 1706 aaKnown RBP12.73□□□□□ -0.37
SH2D4A-204ENST00000519207 XRCC6P12956 609 aaKnown RBP eCLIP12.72□□□□□ -0.37
SH2D4A-204ENST00000519207 PRKAR2BP31323 418 aa12.72□□□□□ -0.37
SH2D4A-204ENST00000519207 SPATA31A6Q5VVP1 1343 aa12.72□□□□□ -0.37
SH2D4A-204ENST00000519207 DCCP43146 1447 aa12.72□□□□□ -0.37
SH2D4A-204ENST00000519207 NFE2L2Q16236 605 aa12.72□□□□□ -0.37
SH2D4A-204ENST00000519207 ANTXR1Q9H6X2 564 aa12.72□□□□□ -0.37
SH2D4A-204ENST00000519207 NOB1Q9ULX3 412 aaKnown RBP12.72□□□□□ -0.37
SH2D4A-204ENST00000519207 AHDC1Q5TGY3 1603 aaPredicted RBP12.71□□□□□ -0.37
SH2D4A-204ENST00000519207 CCDC61Q9Y6R9 512 aa12.71□□□□□ -0.37
SH2D4A-204ENST00000519207 LRP6O75581 1613 aa12.71□□□□□ -0.37
SH2D4A-204ENST00000519207 AKAP12Q02952 1782 aa12.71□□□□□ -0.38
SH2D4A-204ENST00000519207 IL13P35225 146 aa12.7□□□□□ -0.38
SH2D4A-204ENST00000519207 ITPRIPQ8IWB1 547 aa12.7□□□□□ -0.38
SH2D4A-204ENST00000519207 NUDT16Q96DE0 195 aaKnown RBP12.7□□□□□ -0.38
SH2D4A-204ENST00000519207 NAP1L5Q96NT1 182 aaPredicted RBP12.7□□□□□ -0.38
SH2D4A-204ENST00000519207 UPF2Q9HAU5 1272 aaKnown RBP12.7□□□□□ -0.38
SH2D4A-204ENST00000519207 MST1RQ04912 1400 aa12.7□□□□□ -0.38
SH2D4A-204ENST00000519207 SEC24BO95487 1268 aa12.7□□□□□ -0.38
SH2D4A-204ENST00000519207 ZNF692Q9BU19 519 aaPredicted RBP12.7□□□□□ -0.38
SH2D4A-204ENST00000519207 PRDM4Q9UKN5 801 aa12.7□□□□□ -0.38
SH2D4A-204ENST00000519207 BECN1Q14457 450 aa12.69□□□□□ -0.38
SH2D4A-204ENST00000519207 COG3Q96JB2 828 aa12.69□□□□□ -0.38
SH2D4A-204ENST00000519207 ZBTB40Q9NUA8 1239 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms