RNA–Protein interactions for RNA: ENST00000518990.5

CDKL3-202, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 2

Gene CDKL3, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-202ENST00000518990 CCDC116Q8IYX3 515 aa11.37□□□□□ -0.59
CDKL3-202ENST00000518990 PNMA1Q8ND90 353 aa11.37□□□□□ -0.59
CDKL3-202ENST00000518990 ADAM32Q8TC27 787 aa11.37□□□□□ -0.59
CDKL3-202ENST00000518990 GJD4Q96KN9 370 aaPredicted RBP11.37□□□□□ -0.59
CDKL3-202ENST00000518990 PURBQ96QR8 312 aaKnown RBP11.36□□□□□ -0.59
CDKL3-202ENST00000518990 SCARF1Q14162 830 aa11.35□□□□□ -0.59
CDKL3-202ENST00000518990 MEIOBQ8N635 442 aa11.35□□□□□ -0.59
CDKL3-202ENST00000518990 KCTD15Q96SI1 283 aaPredicted RBP11.35□□□□□ -0.59
CDKL3-202ENST00000518990 CDV3Q9UKY7 258 aaKnown RBP11.35□□□□□ -0.59
CDKL3-202ENST00000518990 EMILIN1Q9Y6C2 1016 aa11.34□□□□□ -0.59
CDKL3-202ENST00000518990 TERTO14746 1132 aaKnown RBP11.33□□□□□ -0.6
CDKL3-202ENST00000518990 WFS1O76024 890 aa11.33□□□□□ -0.6
CDKL3-202ENST00000518990 PRKCSHP14314 528 aaPredicted RBP11.33□□□□□ -0.6
CDKL3-202ENST00000518990 PPP1R26Q5T8A7 1209 aaPredicted RBP11.33□□□□□ -0.6
CDKL3-202ENST00000518990 LCE2CQ5TA81 110 aa11.32□□□□□ -0.6
CDKL3-202ENST00000518990 INTS6LQ5JSJ4 861 aaKnown RBP11.31□□□□□ -0.6
CDKL3-202ENST00000518990 BANK1Q8NDB2 785 aa11.31□□□□□ -0.6
CDKL3-202ENST00000518990 C6orf118Q5T5N4 469 aa11.3□□□□□ -0.6
CDKL3-202ENST00000518990 LINC00528Q8N1L1 170 aa11.3□□□□□ -0.6
CDKL3-202ENST00000518990 MTMR14Q8NCE2 650 aa11.29□□□□□ -0.6
CDKL3-202ENST00000518990 SOBPA7XYQ1 873 aa11.28□□□□□ -0.6
CDKL3-202ENST00000518990 SOCS7O14512 581 aa11.28□□□□□ -0.6
CDKL3-202ENST00000518990 PGPEP1Q9NXJ5 209 aa11.28□□□□□ -0.6
CDKL3-202ENST00000518990 GPR37L1O60883 481 aa11.27□□□□□ -0.61
CDKL3-202ENST00000518990 CBLBQ13191 982 aa11.27□□□□□ -0.61
CDKL3-202ENST00000518990 NBPF20Q3BBV1 942 aa11.27□□□□□ -0.61
CDKL3-202ENST00000518990 Q6ZVU0 165 aa11.27□□□□□ -0.61
CDKL3-202ENST00000518990 DZIP3Q86Y13 1208 aaKnown RBP11.27□□□□□ -0.61
CDKL3-202ENST00000518990 NXF1Q9UBU9 619 aaKnown RBP11.27□□□□□ -0.61
CDKL3-202ENST00000518990 ZBBXA8MT70 800 aa11.26□□□□□ -0.61
CDKL3-202ENST00000518990 BMP2P12643 396 aa11.26□□□□□ -0.61
CDKL3-202ENST00000518990 DHX9Q08211 1270 aaKnown RBP11.26□□□□□ -0.61
CDKL3-202ENST00000518990 SNRKQ9NRH2 765 aa11.26□□□□□ -0.61
CDKL3-202ENST00000518990 UPP2O95045 317 aa11.25□□□□□ -0.61
CDKL3-202ENST00000518990 FBXO45P0C2W1 286 aa11.25□□□□□ -0.61
CDKL3-202ENST00000518990 TSEN34Q9BSV6 310 aaKnown RBP11.25□□□□□ -0.61
CDKL3-202ENST00000518990 ESPNB1AK53 854 aa11.24□□□□□ -0.61
CDKL3-202ENST00000518990 TMPRSS4Q9NRS4 437 aa11.23□□□□□ -0.61
CDKL3-202ENST00000518990 SOS2Q07890 1332 aaPredicted RBP11.23□□□□□ -0.61
CDKL3-202ENST00000518990 RAB15P59190 212 aa11.22□□□□□ -0.61
CDKL3-202ENST00000518990 NPAS3Q8IXF0 933 aa11.22□□□□□ -0.61
CDKL3-202ENST00000518990 ERVH48-1M5A8F1 160 aa11.21□□□□□ -0.61
CDKL3-202ENST00000518990 WIPF1O43516 503 aa11.21□□□□□ -0.61
CDKL3-202ENST00000518990 VEGFBP49765 207 aa11.21□□□□□ -0.61
CDKL3-202ENST00000518990 DNMT3LQ9UJW3 386 aa11.21□□□□□ -0.61
CDKL3-202ENST00000518990 NDUFB9Q9Y6M9 179 aa11.21□□□□□ -0.61
CDKL3-202ENST00000518990 H3BM21 787 aa11.2□□□□□ -0.62
CDKL3-202ENST00000518990 MAN1A2O60476 641 aa11.2□□□□□ -0.62
CDKL3-202ENST00000518990 ZNF784Q8NCA9 323 aaPredicted RBP11.2□□□□□ -0.62
CDKL3-202ENST00000518990 PCDHB9Q9Y5E1 797 aa11.2□□□□□ -0.62
CDKL3-202ENST00000518990 SPINT1O43278 529 aa11.19□□□□□ -0.62
CDKL3-202ENST00000518990 LILRA1O75019 489 aa11.19□□□□□ -0.62
CDKL3-202ENST00000518990 SLC16A10Q8TF71 515 aa11.19□□□□□ -0.62
CDKL3-202ENST00000518990 NR1H3Q13133 447 aa11.18□□□□□ -0.62
CDKL3-202ENST00000518990 SEPT12Q8IYM1 358 aa11.18□□□□□ -0.62
CDKL3-202ENST00000518990 AGBL1Q96MI9 1066 aa11.18□□□□□ -0.62
CDKL3-202ENST00000518990 GIGYF1O75420 1035 aaPredicted RBP11.17□□□□□ -0.62
CDKL3-202ENST00000518990 TTLL8A6PVC2 850 aa11.16□□□□□ -0.62
CDKL3-202ENST00000518990 APBB1O00213 710 aa11.16□□□□□ -0.62
CDKL3-202ENST00000518990 ADD1P35611 737 aaKnown RBP11.16□□□□□ -0.62
CDKL3-202ENST00000518990 ERBB4Q15303 1308 aa11.15□□□□□ -0.62
CDKL3-202ENST00000518990 RELBQ01201 579 aa11.15□□□□□ -0.62
CDKL3-202ENST00000518990 KDF1Q8NAX2 398 aaPredicted RBP11.15□□□□□ -0.62
CDKL3-202ENST00000518990 ADH1AP07327 375 aa11.14□□□□□ -0.63
CDKL3-202ENST00000518990 IRF7Q92985 503 aa11.14□□□□□ -0.63
CDKL3-202ENST00000518990 TBC1D2BQ9UPU7 963 aa11.13□□□□□ -0.63
CDKL3-202ENST00000518990 GMPRP36959 345 aa11.12□□□□□ -0.63
CDKL3-202ENST00000518990 CTSOP43234 321 aaPredicted RBP11.12□□□□□ -0.63
CDKL3-202ENST00000518990 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.12□□□□□ -0.63
CDKL3-202ENST00000518990 INSM2Q96T92 566 aaPredicted RBP11.12□□□□□ -0.63
CDKL3-202ENST00000518990 CYLDQ9NQC7 956 aa11.12□□□□□ -0.63
CDKL3-202ENST00000518990 FIGNL2A6NMB9 653 aa11.11□□□□□ -0.63
CDKL3-202ENST00000518990 MCCD1P59942 119 aaPredicted RBP11.11□□□□□ -0.63
CDKL3-202ENST00000518990 ZNF395Q9H8N7 513 aaPredicted RBP11.11□□□□□ -0.63
CDKL3-202ENST00000518990 PPFIA3O75145 1194 aa11.1□□□□□ -0.63
CDKL3-202ENST00000518990 VSIG8P0DPA2 414 aa11.1□□□□□ -0.63
CDKL3-202ENST00000518990 PTGIRP43119 386 aa11.09□□□□□ -0.63
CDKL3-202ENST00000518990 ZNF330Q9Y3S2 320 aaPredicted RBP11.09□□□□□ -0.63
CDKL3-202ENST00000518990 PTSQ03393 145 aa11.08□□□□□ -0.64
CDKL3-202ENST00000518990 IRF5Q13568 498 aa11.08□□□□□ -0.64
CDKL3-202ENST00000518990 CCDC125Q86Z20 511 aa11.08□□□□□ -0.64
CDKL3-202ENST00000518990 INSM1Q01101 510 aaPredicted RBP11.07□□□□□ -0.64
CDKL3-202ENST00000518990 RNF20Q5VTR2 975 aa11.07□□□□□ -0.64
CDKL3-202ENST00000518990 RNF217Q8TC41 542 aa11.07□□□□□ -0.64
CDKL3-202ENST00000518990 ZNF592Q92610 1267 aa11.07□□□□□ -0.64
CDKL3-202ENST00000518990 POLMQ9NP87 494 aaPredicted RBP11.07□□□□□ -0.64
CDKL3-202ENST00000518990 ERVK-9P63128 1117 aa11.06□□□□□ -0.64
CDKL3-202ENST00000518990 FOXD4L5Q5VV16 416 aaPredicted RBP11.06□□□□□ -0.64
CDKL3-202ENST00000518990 SCTRP47872 440 aa11.04□□□□□ -0.64
CDKL3-202ENST00000518990 CC2D2BQ6DHV5 1058 aa11.04□□□□□ -0.64
CDKL3-202ENST00000518990 TRIM52Q96A61 297 aa11.04□□□□□ -0.64
CDKL3-202ENST00000518990 ATP5J2-PTCD1G3V325 749 aa11.03□□□□□ -0.64
CDKL3-202ENST00000518990 LORP23490 312 aaPredicted RBP11.03□□□□□ -0.64
CDKL3-202ENST00000518990 MCM6Q14566 821 aa11.03□□□□□ -0.64
CDKL3-202ENST00000518990 PRM3Q9NNZ6 103 aa11.03□□□□□ -0.64
CDKL3-202ENST00000518990 CEP126Q9P2H0 1117 aa11.03□□□□□ -0.64
CDKL3-202ENST00000518990 PCDHB11Q9Y5F2 797 aa11.03□□□□□ -0.64
CDKL3-202ENST00000518990 SLC35F4A4IF30 521 aa11.02□□□□□ -0.65
CDKL3-202ENST00000518990 CCDC155Q8N6L0 562 aa11.02□□□□□ -0.65
CDKL3-202ENST00000518990 GDPD2Q9HCC8 539 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms