RNA–Protein interactions for RNA: ENST00000518761.8

NPIPB4-204, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 3

Gene NPIPB4, Length 576 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-204	ENST00000518761	SLFNL1	Q499Z3	407 aa		6.64	□□□□□ -1.35
NPIPB4-204	ENST00000518761	SNIP1	Q8TAD8	396 aa	Known RBP	6.64	□□□□□ -1.35
NPIPB4-204	ENST00000518761	CCDC97	Q96F63	343 aa	Predicted RBP	6.64	□□□□□ -1.35
NPIPB4-204	ENST00000518761	CDK15	Q96Q40	435 aa		6.64	□□□□□ -1.35
NPIPB4-204	ENST00000518761	CEP126	Q9P2H0	1117 aa		6.64	□□□□□ -1.35
NPIPB4-204	ENST00000518761	SERPINA10	Q9UK55	444 aa		6.64	□□□□□ -1.35
NPIPB4-204	ENST00000518761	SIAH2	O43255	324 aa		6.63	□□□□□ -1.35
NPIPB4-204	ENST00000518761	PRR20E	P86478	221 aa		6.63	□□□□□ -1.35
NPIPB4-204	ENST00000518761	PRR20C	P86479	221 aa		6.63	□□□□□ -1.35
NPIPB4-204	ENST00000518761	PRR20D	P86480	221 aa		6.63	□□□□□ -1.35
NPIPB4-204	ENST00000518761	PRR20B	P86481	221 aa		6.63	□□□□□ -1.35
NPIPB4-204	ENST00000518761	PRR20A	P86496	221 aa		6.63	□□□□□ -1.35
NPIPB4-204	ENST00000518761	MYT1	Q01538	1121 aa		6.63	□□□□□ -1.35
NPIPB4-204	ENST00000518761	PKDCC	Q504Y2	493 aa		6.63	□□□□□ -1.35
NPIPB4-204	ENST00000518761	TREML4	Q6UXN2	200 aa		6.63	□□□□□ -1.35
NPIPB4-204	ENST00000518761	SEPT12	Q8IYM1	358 aa		6.63	□□□□□ -1.35
NPIPB4-204	ENST00000518761	CYP4X1	Q8N118	509 aa		6.63	□□□□□ -1.35
NPIPB4-204	ENST00000518761	KCTD15	Q96SI1	283 aa	Predicted RBP	6.63	□□□□□ -1.35
NPIPB4-204	ENST00000518761	PKD2L1	Q9P0L9	805 aa		6.63	□□□□□ -1.35
NPIPB4-204	ENST00000518761	TTC24	A2A3L6	582 aa	Predicted RBP	6.62	□□□□□ -1.35
NPIPB4-204	ENST00000518761	POTEC	B2RU33	542 aa		6.62	□□□□□ -1.35
NPIPB4-204	ENST00000518761	GDF9	O60383	454 aa		6.62	□□□□□ -1.35
NPIPB4-204	ENST00000518761	NFATC2IP	Q8NCF5	419 aa		6.62	□□□□□ -1.35
NPIPB4-204	ENST00000518761	ADAMTS19	Q8TE59	1207 aa		6.62	□□□□□ -1.35
NPIPB4-204	ENST00000518761	TLL2	Q9Y6L7	1015 aa		6.62	□□□□□ -1.35
NPIPB4-204	ENST00000518761	TNFRSF10A	O00220	468 aa		6.61	□□□□□ -1.35
NPIPB4-204	ENST00000518761	DGAT1	O75907	488 aa		6.61	□□□□□ -1.35
NPIPB4-204	ENST00000518761	ADH1C	P00326	375 aa		6.61	□□□□□ -1.35
NPIPB4-204	ENST00000518761	ALDH1A1	P00352	501 aa		6.61	□□□□□ -1.35
NPIPB4-204	ENST00000518761	DHX9	Q08211	1270 aa	Known RBP	6.61	□□□□□ -1.35
NPIPB4-204	ENST00000518761	NR5A1	Q13285	461 aa		6.61	□□□□□ -1.35
NPIPB4-204	ENST00000518761	LCE2A	Q5TA79	106 aa	Predicted RBP	6.61	□□□□□ -1.35
NPIPB4-204	ENST00000518761	RNF135	Q8IUD6	432 aa		6.61	□□□□□ -1.35
NPIPB4-204	ENST00000518761	WASF2	Q9Y6W5	498 aa		6.61	□□□□□ -1.35
NPIPB4-204	ENST00000518761	ESPN	B1AK53	854 aa		6.6	□□□□□ -1.35
NPIPB4-204	ENST00000518761	GIGYF1	O75420	1035 aa	Predicted RBP	6.6	□□□□□ -1.35
NPIPB4-204	ENST00000518761	FSHR	P23945	695 aa		6.6	□□□□□ -1.35
NPIPB4-204	ENST00000518761	TRIM67	Q6ZTA4	783 aa		6.6	□□□□□ -1.35
NPIPB4-204	ENST00000518761	LZTS3	O60299	673 aa	Predicted RBP	6.59	□□□□□ -1.35
NPIPB4-204	ENST00000518761	GRM5	P41594	1212 aa		6.59	□□□□□ -1.35
NPIPB4-204	ENST00000518761	MAP7D1	Q3KQU3	841 aa		6.59	□□□□□ -1.35
NPIPB4-204	ENST00000518761	CCDC82	Q8N4S0	544 aa		6.59	□□□□□ -1.35
NPIPB4-204	ENST00000518761	C1orf115	Q9H7X2	142 aa		6.59	□□□□□ -1.35
NPIPB4-204	ENST00000518761	TOR4A	Q9NXH8	423 aa		6.59	□□□□□ -1.35
NPIPB4-204	ENST00000518761	ATP9B	O43861	1147 aa		6.58	□□□□□ -1.36
NPIPB4-204	ENST00000518761	SKI	P12755	728 aa		6.58	□□□□□ -1.36
NPIPB4-204	ENST00000518761	CCDC116	Q8IYX3	515 aa		6.58	□□□□□ -1.36
NPIPB4-204	ENST00000518761	PHTF2	Q8N3S3	785 aa		6.58	□□□□□ -1.36
NPIPB4-204	ENST00000518761	PPP1R12C	Q9BZL4	782 aa		6.58	□□□□□ -1.36
NPIPB4-204	ENST00000518761	PALM3	A6NDB9	673 aa	Predicted RBP	6.57	□□□□□ -1.36
NPIPB4-204	ENST00000518761	RAB15	P59190	212 aa		6.57	□□□□□ -1.36
NPIPB4-204	ENST00000518761	INTS6L	Q5JSJ4	861 aa	Known RBP	6.57	□□□□□ -1.36
NPIPB4-204	ENST00000518761	PLPP7	Q8NBV4	271 aa		6.57	□□□□□ -1.36
NPIPB4-204	ENST00000518761	SIRT1	Q96EB6	747 aa		6.57	□□□□□ -1.36
NPIPB4-204	ENST00000518761	UCN2	Q96RP3	112 aa		6.57	□□□□□ -1.36
NPIPB4-204	ENST00000518761	ESF1	Q9H501	851 aa	Known RBP	6.57	□□□□□ -1.36
NPIPB4-204	ENST00000518761	TFIP11	Q9UBB9	837 aa	Known RBP	6.57	□□□□□ -1.36
NPIPB4-204	ENST00000518761	STK17A	Q9UEE5	414 aa		6.57	□□□□□ -1.36
NPIPB4-204	ENST00000518761	DOLK	Q9UPQ8	538 aa		6.57	□□□□□ -1.36
NPIPB4-204	ENST00000518761		J3QL48	77 aa		6.56	□□□□□ -1.36
NPIPB4-204	ENST00000518761	NNT	Q13423	1086 aa		6.56	□□□□□ -1.36
NPIPB4-204	ENST00000518761	TBC1D9	Q6ZT07	1266 aa		6.56	□□□□□ -1.36
NPIPB4-204	ENST00000518761	PGPEP1	Q9NXJ5	209 aa		6.56	□□□□□ -1.36
NPIPB4-204	ENST00000518761	CHIC2	Q9UKJ5	165 aa		6.56	□□□□□ -1.36
NPIPB4-204	ENST00000518761	EMILIN1	Q9Y6C2	1016 aa		6.56	□□□□□ -1.36
NPIPB4-204	ENST00000518761	ERVH48-1	M5A8F1	160 aa		6.55	□□□□□ -1.36
NPIPB4-204	ENST00000518761	PIK3CD	O00329	1044 aa		6.55	□□□□□ -1.36
NPIPB4-204	ENST00000518761	USP4	Q13107	963 aa		6.55	□□□□□ -1.36
NPIPB4-204	ENST00000518761	PLEKHM2	Q8IWE5	1019 aa		6.55	□□□□□ -1.36
NPIPB4-204	ENST00000518761	ARID3A	Q99856	593 aa		6.55	□□□□□ -1.36
NPIPB4-204	ENST00000518761	PCDHB11	Q9Y5F2	797 aa		6.55	□□□□□ -1.36
NPIPB4-204	ENST00000518761	USP17L5	A8MUK1	530 aa		6.54	□□□□□ -1.36
NPIPB4-204	ENST00000518761	MYC	P01106	439 aa	Predicted RBP	6.54	□□□□□ -1.36
NPIPB4-204	ENST00000518761	SMPD1	P17405	629 aa		6.54	□□□□□ -1.36
NPIPB4-204	ENST00000518761	LMOD1	P29536	600 aa	Predicted RBP	6.54	□□□□□ -1.36
NPIPB4-204	ENST00000518761	EML3	Q32P44	896 aa		6.54	□□□□□ -1.36
NPIPB4-204	ENST00000518761	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	6.54	□□□□□ -1.36
NPIPB4-204	ENST00000518761	CCDC85A	Q96PX6	553 aa	Predicted RBP	6.54	□□□□□ -1.36
NPIPB4-204	ENST00000518761	MAFB	Q9Y5Q3	323 aa	Predicted RBP	6.54	□□□□□ -1.36
NPIPB4-204	ENST00000518761	USP17L3	A6NCW0	530 aa		6.53	□□□□□ -1.36
NPIPB4-204	ENST00000518761	USP17L4	A6NCW7	530 aa		6.53	□□□□□ -1.36
NPIPB4-204	ENST00000518761	FAM187A	A6NFU0	413 aa		6.53	□□□□□ -1.36
NPIPB4-204	ENST00000518761	NR3C2	P08235	984 aa		6.53	□□□□□ -1.36
NPIPB4-204	ENST00000518761	OXLD1	Q5BKU9	147 aa		6.53	□□□□□ -1.36
NPIPB4-204	ENST00000518761	CFAP70	Q5T0N1	1121 aa		6.53	□□□□□ -1.36
NPIPB4-204	ENST00000518761	USP17L2	Q6R6M4	530 aa		6.53	□□□□□ -1.36
NPIPB4-204	ENST00000518761	USP17L1	Q7RTZ2	530 aa		6.53	□□□□□ -1.36
NPIPB4-204	ENST00000518761	WFS1	O76024	890 aa		6.52	□□□□□ -1.37
NPIPB4-204	ENST00000518761	NCOA4	Q13772	614 aa		6.52	□□□□□ -1.37
NPIPB4-204	ENST00000518761	CC2D2B	Q6DHV5	1058 aa		6.52	□□□□□ -1.37
NPIPB4-204	ENST00000518761	TRIM50	Q86XT4	487 aa		6.52	□□□□□ -1.37
NPIPB4-204	ENST00000518761	NOD1	Q9Y239	953 aa		6.52	□□□□□ -1.37
NPIPB4-204	ENST00000518761	LOC100996750	A0A140TA64	210 aa		6.51	□□□□□ -1.37
NPIPB4-204	ENST00000518761	ATP5J2-PTCD1	G3V325	749 aa		6.51	□□□□□ -1.37
NPIPB4-204	ENST00000518761	PPP1R15A	O75807	674 aa	Predicted RBP	6.51	□□□□□ -1.37
NPIPB4-204	ENST00000518761	RFX1	P22670	979 aa		6.51	□□□□□ -1.37
NPIPB4-204	ENST00000518761	WDR4	P57081	412 aa	Known RBP	6.51	□□□□□ -1.37
NPIPB4-204	ENST00000518761	ERVK-9	P63128	1117 aa		6.51	□□□□□ -1.37
NPIPB4-204	ENST00000518761	TSGA10IP	Q3SY00	556 aa		6.51	□□□□□ -1.37
NPIPB4-204	ENST00000518761	DEPDC4	Q8N2C3	294 aa		6.51	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms