RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 PTPRMP28827 1452 aa10.68□□□□□ -0.7
CCDC6-203ENST00000518638 ADAMTSL3P82987 1691 aa10.67□□□□□ -0.7
CCDC6-203ENST00000518638 ERBB4Q15303 1308 aa10.67□□□□□ -0.7
CCDC6-203ENST00000518638 SUPT5HO00267 1087 aaKnown RBP10.67□□□□□ -0.7
CCDC6-203ENST00000518638 TRIM66O15016 1216 aa10.67□□□□□ -0.7
CCDC6-203ENST00000518638 ARAP3Q8WWN8 1544 aa10.67□□□□□ -0.7
CCDC6-203ENST00000518638 PHLDB1Q86UU1 1377 aa10.66□□□□□ -0.7
CCDC6-203ENST00000518638 WASF2Q9Y6W5 498 aa10.66□□□□□ -0.7
CCDC6-203ENST00000518638 AMHR2Q16671 573 aa10.65□□□□□ -0.7
CCDC6-203ENST00000518638 EHBP1Q8NDI1 1231 aa10.65□□□□□ -0.7
CCDC6-203ENST00000518638 SUZ12Q15022 739 aaKnown RBP10.64□□□□□ -0.71
CCDC6-203ENST00000518638 SIAH2O43255 324 aa10.63□□□□□ -0.71
CCDC6-203ENST00000518638 KDM4AO75164 1064 aa10.63□□□□□ -0.71
CCDC6-203ENST00000518638 CD46P15529 392 aa10.63□□□□□ -0.71
CCDC6-203ENST00000518638 GOLGA3Q08378 1498 aa10.62□□□□□ -0.71
CCDC6-203ENST00000518638 BCORL1Q5H9F3 1711 aa10.62□□□□□ -0.71
CCDC6-203ENST00000518638 USP46P62068 366 aa10.61□□□□□ -0.71
CCDC6-203ENST00000518638 RAPGEF2Q9Y4G8 1499 aa10.61□□□□□ -0.71
CCDC6-203ENST00000518638 SOCS7O14512 581 aa10.6□□□□□ -0.71
CCDC6-203ENST00000518638 JUNDP17535 347 aa10.6□□□□□ -0.71
CCDC6-203ENST00000518638 MDM2Q00987 491 aaPredicted RBP10.6□□□□□ -0.71
CCDC6-203ENST00000518638 FAM9AQ8IZU1 332 aaPredicted RBP10.6□□□□□ -0.71
CCDC6-203ENST00000518638 ABCA8O94911 1581 aa10.6□□□□□ -0.71
CCDC6-203ENST00000518638 MADDQ8WXG6 1647 aa10.59□□□□□ -0.71
CCDC6-203ENST00000518638 CLCN1P35523 988 aa10.59□□□□□ -0.71
CCDC6-203ENST00000518638 PDE4DQ08499 809 aa10.59□□□□□ -0.71
CCDC6-203ENST00000518638 ZFP42Q96MM3 310 aa10.59□□□□□ -0.71
CCDC6-203ENST00000518638 GPCPD1Q9NPB8 672 aa10.59□□□□□ -0.71
CCDC6-203ENST00000518638 CTTNBP2Q8WZ74 1663 aa10.59□□□□□ -0.71
CCDC6-203ENST00000518638 NEO1Q92859 1461 aa10.58□□□□□ -0.72
CCDC6-203ENST00000518638 TTLL12Q14166 644 aaPredicted RBP10.58□□□□□ -0.72
CCDC6-203ENST00000518638 PARP9Q8IXQ6 854 aa10.57□□□□□ -0.72
CCDC6-203ENST00000518638 HLA-CQ95604 372 aa10.57□□□□□ -0.72
CCDC6-203ENST00000518638 ABCA9Q8IUA7 1624 aa10.57□□□□□ -0.72
CCDC6-203ENST00000518638 DISP3Q9P2K9 1392 aa10.56□□□□□ -0.72
CCDC6-203ENST00000518638 VSIG8P0DPA2 414 aa10.56□□□□□ -0.72
CCDC6-203ENST00000518638 NUDT12Q9BQG2 462 aa10.56□□□□□ -0.72
CCDC6-203ENST00000518638 RIMS1Q86UR5 1692 aaKnown RBP10.56□□□□□ -0.72
CCDC6-203ENST00000518638 HOXA2O43364 376 aa10.55□□□□□ -0.72
CCDC6-203ENST00000518638 POGZQ7Z3K3 1410 aa10.55□□□□□ -0.72
CCDC6-203ENST00000518638 ARID4BQ4LE39 1312 aaPredicted RBP10.55□□□□□ -0.72
CCDC6-203ENST00000518638 ARHGEF40Q8TER5 1519 aa10.54□□□□□ -0.72
CCDC6-203ENST00000518638 GIGYF2Q6Y7W6 1299 aaKnown RBP10.54□□□□□ -0.72
CCDC6-203ENST00000518638 FAM217BQ9NTX9 383 aaPredicted RBP10.54□□□□□ -0.72
CCDC6-203ENST00000518638 KCNMA1Q12791 1236 aa10.53□□□□□ -0.72
CCDC6-203ENST00000518638 SCARF1Q14162 830 aa10.53□□□□□ -0.72
CCDC6-203ENST00000518638 PTCRAQ6ISU1 281 aaPredicted RBP10.53□□□□□ -0.72
CCDC6-203ENST00000518638 FANCAO15360 1455 aa10.53□□□□□ -0.72
CCDC6-203ENST00000518638 SH3BP2P78314 561 aa10.52□□□□□ -0.73
CCDC6-203ENST00000518638 MRPL14Q6P1L8 145 aaKnown RBP10.52□□□□□ -0.73
CCDC6-203ENST00000518638 FRMPD1Q5SYB0 1578 aa10.52□□□□□ -0.73
CCDC6-203ENST00000518638 SPATA31D1Q6ZQQ2 1576 aa10.52□□□□□ -0.73
CCDC6-203ENST00000518638 CFAP74Q9C0B2 1584 aa10.52□□□□□ -0.73
CCDC6-203ENST00000518638 RETREG3Q86VR2 466 aa10.51□□□□□ -0.73
CCDC6-203ENST00000518638 KCTD17Q8N5Z5 321 aa10.51□□□□□ -0.73
CCDC6-203ENST00000518638 TLL2Q9Y6L7 1015 aa10.5□□□□□ -0.73
CCDC6-203ENST00000518638 SSTR3P32745 418 aaPredicted RBP10.49□□□□□ -0.73
CCDC6-203ENST00000518638 BRPF1P55201 1214 aaPredicted RBP10.49□□□□□ -0.73
CCDC6-203ENST00000518638 GUCA2AQ02747 115 aa10.49□□□□□ -0.73
CCDC6-203ENST00000518638 GPBP1L1Q9HC44 474 aaPredicted RBP10.49□□□□□ -0.73
CCDC6-203ENST00000518638 AKNAQ7Z591 1439 aa10.49□□□□□ -0.73
CCDC6-203ENST00000518638 EFCAB5A4FU69 1503 aa10.48□□□□□ -0.73
CCDC6-203ENST00000518638 PLEKHG3A1L390 1219 aa10.48□□□□□ -0.73
CCDC6-203ENST00000518638 RAPGEF3O95398 923 aa10.48□□□□□ -0.73
CCDC6-203ENST00000518638 CCNYL3P0C7X3 344 aa10.48□□□□□ -0.73
CCDC6-203ENST00000518638 NEUROD2Q15784 382 aa10.48□□□□□ -0.73
CCDC6-203ENST00000518638 ILDR2Q71H61 639 aa10.48□□□□□ -0.73
CCDC6-203ENST00000518638 SYMPKQ92797 1274 aaKnown RBP10.48□□□□□ -0.73
CCDC6-203ENST00000518638 PURBQ96QR8 312 aaKnown RBP10.48□□□□□ -0.73
CCDC6-203ENST00000518638 TTC37Q6PGP7 1564 aa10.48□□□□□ -0.73
CCDC6-203ENST00000518638 PREX1Q8TCU6 1659 aa10.47□□□□□ -0.73
CCDC6-203ENST00000518638 RICTORQ6R327 1708 aa10.47□□□□□ -0.73
CCDC6-203ENST00000518638 MS4A1P11836 297 aa10.47□□□□□ -0.73
CCDC6-203ENST00000518638 HSPA2P54652 639 aa10.47□□□□□ -0.73
CCDC6-203ENST00000518638 NNTQ13423 1086 aa10.47□□□□□ -0.73
CCDC6-203ENST00000518638 KDM4CQ9H3R0 1056 aa10.47□□□□□ -0.73
CCDC6-203ENST00000518638 DENND4BO75064 1496 aaPredicted RBP10.47□□□□□ -0.73
CCDC6-203ENST00000518638 ATP10BO94823 1461 aa10.47□□□□□ -0.73
CCDC6-203ENST00000518638 ZMYM4Q5VZL5 1548 aa10.47□□□□□ -0.73
CCDC6-203ENST00000518638 FER1L4A9Z1Z3 1794 aa10.47□□□□□ -0.73
CCDC6-203ENST00000518638 SOBPA7XYQ1 873 aa10.46□□□□□ -0.73
CCDC6-203ENST00000518638 GSK3AP49840 483 aa10.46□□□□□ -0.73
CCDC6-203ENST00000518638 FHOD3Q2V2M9 1422 aa10.46□□□□□ -0.74
CCDC6-203ENST00000518638 MAGI2Q86UL8 1455 aa10.46□□□□□ -0.74
CCDC6-203ENST00000518638 ADH1CP00326 375 aa10.45□□□□□ -0.74
CCDC6-203ENST00000518638 YEATS2Q9ULM3 1422 aa10.44□□□□□ -0.74
CCDC6-203ENST00000518638 TIMP2P16035 220 aa10.44□□□□□ -0.74
CCDC6-203ENST00000518638 WDR4P57081 412 aaKnown RBP10.44□□□□□ -0.74
CCDC6-203ENST00000518638 TMEM151AQ8N4L1 468 aa10.44□□□□□ -0.74
CCDC6-203ENST00000518638 MPNDQ8N594 471 aa10.44□□□□□ -0.74
CCDC6-203ENST00000518638 ZFYVE16Q7Z3T8 1539 aa10.43□□□□□ -0.74
CCDC6-203ENST00000518638 IQSEC2Q5JU85 1478 aa10.43□□□□□ -0.74
CCDC6-203ENST00000518638 VARSP26640 1264 aaKnown RBP10.43□□□□□ -0.74
CCDC6-203ENST00000518638 LINC01559Q495D7 138 aa10.43□□□□□ -0.74
CCDC6-203ENST00000518638 UNC93B1Q9H1C4 597 aa10.43□□□□□ -0.74
CCDC6-203ENST00000518638 RAPGEF6Q8TEU7 1601 aa10.43□□□□□ -0.74
CCDC6-203ENST00000518638 BEGAINQ9BUH8 593 aa10.42□□□□□ -0.74
CCDC6-203ENST00000518638 RNF225M0QZC1 329 aaPredicted RBP10.41□□□□□ -0.74
CCDC6-203ENST00000518638 PTPRNQ16849 979 aa10.41□□□□□ -0.74
CCDC6-203ENST00000518638 MAN1A2O60476 641 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms