RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 PHRF1Q9P1Y6 1649 aaKnown RBP12.99□□□□□ -0.33
PVT1-207ENST00000518528 EXOC5O00471 708 aa12.98□□□□□ -0.33
PVT1-207ENST00000518528 CSB-PGBD3P0DP91 1061 aa12.98□□□□□ -0.33
PVT1-207ENST00000518528 PTF1AQ7RTS3 328 aa12.98□□□□□ -0.33
PVT1-207ENST00000518528 WDR17Q8IZU2 1322 aa12.97□□□□□ -0.33
PVT1-207ENST00000518528 ITSN1Q15811 1721 aa12.96□□□□□ -0.33
PVT1-207ENST00000518528 CARD10Q9BWT7 1032 aa12.96□□□□□ -0.33
PVT1-207ENST00000518528 MAP3K5Q99683 1374 aa12.95□□□□□ -0.34
PVT1-207ENST00000518528 SGIP1Q9BQI5 828 aa12.95□□□□□ -0.34
PVT1-207ENST00000518528 PARP4Q9UKK3 1724 aaKnown RBP12.95□□□□□ -0.34
PVT1-207ENST00000518528 LMO7Q8WWI1 1683 aa12.95□□□□□ -0.34
PVT1-207ENST00000518528 RGPD3A6NKT7 1758 aaPredicted RBP12.94□□□□□ -0.34
PVT1-207ENST00000518528 RGPD4Q7Z3J3 1758 aa12.94□□□□□ -0.34
PVT1-207ENST00000518528 POLD1P28340 1107 aa12.94□□□□□ -0.34
PVT1-207ENST00000518528 KCNH5Q8NCM2 988 aa12.94□□□□□ -0.34
PVT1-207ENST00000518528 PPIP5K1Q6PFW1 1433 aa12.94□□□□□ -0.34
PVT1-207ENST00000518528 PELP1Q8IZL8 1130 aaKnown RBP12.93□□□□□ -0.34
PVT1-207ENST00000518528 CASZ1Q86V15 1759 aa12.93□□□□□ -0.34
PVT1-207ENST00000518528 KLHL34Q8N239 644 aa12.92□□□□□ -0.34
PVT1-207ENST00000518528 SLC16A10Q8TF71 515 aa12.92□□□□□ -0.34
PVT1-207ENST00000518528 CABP2Q9NPB3 220 aa12.92□□□□□ -0.34
PVT1-207ENST00000518528 CABP1Q9NZU7 370 aa12.92□□□□□ -0.34
PVT1-207ENST00000518528 MYOM1P52179 1685 aa12.92□□□□□ -0.34
PVT1-207ENST00000518528 CCDC7Q96M83 1385 aa12.92□□□□□ -0.34
PVT1-207ENST00000518528 PEAK1Q9H792 1746 aa12.91□□□□□ -0.34
PVT1-207ENST00000518528 ARHGEF25Q86VW2 580 aa12.91□□□□□ -0.34
PVT1-207ENST00000518528 AXIN2Q9Y2T1 843 aa12.91□□□□□ -0.34
PVT1-207ENST00000518528 CENPJQ9HC77 1338 aaPredicted RBP12.9□□□□□ -0.34
PVT1-207ENST00000518528 USP6P35125 1406 aa12.9□□□□□ -0.34
PVT1-207ENST00000518528 GRIN3BO60391 1043 aa12.9□□□□□ -0.34
PVT1-207ENST00000518528 ACSBG1Q96GR2 724 aa12.89□□□□□ -0.35
PVT1-207ENST00000518528 ZNF692Q9BU19 519 aaPredicted RBP12.89□□□□□ -0.35
PVT1-207ENST00000518528 CPSF1Q10570 1443 aaKnown RBP12.88□□□□□ -0.35
PVT1-207ENST00000518528 LRRC37A3O60309 1634 aa12.88□□□□□ -0.35
PVT1-207ENST00000518528 SOX12O15370 315 aa12.88□□□□□ -0.35
PVT1-207ENST00000518528 RAB3GAP2Q9H2M9 1393 aa12.88□□□□□ -0.35
PVT1-207ENST00000518528 SLC27A3Q5K4L6 730 aa12.87□□□□□ -0.35
PVT1-207ENST00000518528 SLIT3O75094 1523 aa12.87□□□□□ -0.35
PVT1-207ENST00000518528 TOPAZ1Q8N9V7 1692 aa12.86□□□□□ -0.35
PVT1-207ENST00000518528 ARHGEF28Q8N1W1 1705 aaKnown RBP12.86□□□□□ -0.35
PVT1-207ENST00000518528 NLRP2Q9NX02 1062 aa12.86□□□□□ -0.35
PVT1-207ENST00000518528 TNS2Q63HR2 1409 aa12.86□□□□□ -0.35
PVT1-207ENST00000518528 EVC2Q86UK5 1308 aa12.86□□□□□ -0.35
PVT1-207ENST00000518528 TTC21AQ8NDW8 1320 aa12.86□□□□□ -0.35
PVT1-207ENST00000518528 IL2RBP14784 551 aa12.85□□□□□ -0.35
PVT1-207ENST00000518528 ZNF827Q17R98 1081 aa12.85□□□□□ -0.35
PVT1-207ENST00000518528 TFCP2L1Q9NZI6 479 aa12.85□□□□□ -0.35
PVT1-207ENST00000518528 TTC21BQ7Z4L5 1316 aa12.85□□□□□ -0.35
PVT1-207ENST00000518528 NBPF1Q3BBV0 1214 aa12.84□□□□□ -0.35
PVT1-207ENST00000518528 AKT1S1Q96B36 256 aa12.83□□□□□ -0.36
PVT1-207ENST00000518528 CHD4Q14839 1912 aa12.83□□□□□ -0.36
PVT1-207ENST00000518528 SBF2Q86WG5 1849 aa12.83□□□□□ -0.36
PVT1-207ENST00000518528 GPBP1L1Q9HC44 474 aaPredicted RBP12.82□□□□□ -0.36
PVT1-207ENST00000518528 LRRC4BQ9NT99 713 aa12.82□□□□□ -0.36
PVT1-207ENST00000518528 UTRNP46939 3433 aa12.82□□□□□ -0.36
PVT1-207ENST00000518528 HMGB2P26583 209 aaKnown RBP12.81□□□□□ -0.36
PVT1-207ENST00000518528 MSH5O43196 834 aa12.8□□□□□ -0.36
PVT1-207ENST00000518528 NLGN2Q8NFZ4 835 aa12.8□□□□□ -0.36
PVT1-207ENST00000518528 ERBB3P21860 1342 aa12.8□□□□□ -0.36
PVT1-207ENST00000518528 PNPLA7Q6ZV29 1317 aa12.8□□□□□ -0.36
PVT1-207ENST00000518528 HSPA6P17066 643 aa12.79□□□□□ -0.36
PVT1-207ENST00000518528 ABCC6O95255 1503 aa12.78□□□□□ -0.36
PVT1-207ENST00000518528 YBX3P16989 372 aaKnown RBP eCLIP12.78□□□□□ -0.36
PVT1-207ENST00000518528 DDX54Q8TDD1 881 aaKnown RBP12.78□□□□□ -0.36
PVT1-207ENST00000518528 ANKRD24Q8TF21 1146 aa12.78□□□□□ -0.36
PVT1-207ENST00000518528 SYTL4Q96C24 671 aaPredicted RBP12.78□□□□□ -0.36
PVT1-207ENST00000518528 AKAP12Q02952 1782 aa12.78□□□□□ -0.36
PVT1-207ENST00000518528 KTN1Q86UP2 1357 aaKnown RBP12.78□□□□□ -0.36
PVT1-207ENST00000518528 COL18A1P39060 1754 aa12.77□□□□□ -0.36
PVT1-207ENST00000518528 ATP10DQ9P241 1426 aa12.77□□□□□ -0.37
PVT1-207ENST00000518528 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.76□□□□□ -0.37
PVT1-207ENST00000518528 TRPM1Q7Z4N2 1603 aa12.76□□□□□ -0.37
PVT1-207ENST00000518528 NHSQ6T4R5 1651 aa12.76□□□□□ -0.37
PVT1-207ENST00000518528 PAPPAQ13219 1627 aa12.75□□□□□ -0.37
PVT1-207ENST00000518528 CCNL1Q9UK58 526 aaPredicted RBP12.75□□□□□ -0.37
PVT1-207ENST00000518528 CD2APQ9Y5K6 639 aa12.75□□□□□ -0.37
PVT1-207ENST00000518528 KIAA1210Q9ULL0 1709 aa12.74□□□□□ -0.37
PVT1-207ENST00000518528 PIK3C2AO00443 1686 aa12.74□□□□□ -0.37
PVT1-207ENST00000518528 PRIM1P49642 420 aaKnown RBP12.74□□□□□ -0.37
PVT1-207ENST00000518528 FLAD1Q8NFF5 587 aa12.74□□□□□ -0.37
PVT1-207ENST00000518528 NFAT5O94916 1531 aa12.73□□□□□ -0.37
PVT1-207ENST00000518528 USP31Q70CQ4 1352 aa12.73□□□□□ -0.37
PVT1-207ENST00000518528 ZNF526Q8TF50 670 aaPredicted RBP12.73□□□□□ -0.37
PVT1-207ENST00000518528 CEP350Q5VT06 3117 aa12.73□□□□□ -0.37
PVT1-207ENST00000518528 WNK3Q9BYP7 1800 aa12.73□□□□□ -0.37
PVT1-207ENST00000518528 QRICH2Q9H0J4 1663 aa12.73□□□□□ -0.37
PVT1-207ENST00000518528 KCNQ4P56696 695 aa12.72□□□□□ -0.37
PVT1-207ENST00000518528 HDGFL2Q7Z4V5 671 aaPredicted RBP12.72□□□□□ -0.37
PVT1-207ENST00000518528 SHANK3Q9BYB0 1731 aa12.71□□□□□ -0.37
PVT1-207ENST00000518528 ANKRD36BQ8N2N9 1353 aa12.71□□□□□ -0.37
PVT1-207ENST00000518528 MSL1Q68DK7 614 aa12.71□□□□□ -0.37
PVT1-207ENST00000518528 COL23A1Q86Y22 540 aaPredicted RBP12.71□□□□□ -0.37
PVT1-207ENST00000518528 USP47Q96K76 1375 aa12.7□□□□□ -0.38
PVT1-207ENST00000518528 APLP1P51693 650 aa12.7□□□□□ -0.38
PVT1-207ENST00000518528 NME9Q86XW9 330 aa12.7□□□□□ -0.38
PVT1-207ENST00000518528 ZCRB1Q8TBF4 217 aaKnown RBP12.7□□□□□ -0.38
PVT1-207ENST00000518528 IP6K1Q92551 441 aa12.7□□□□□ -0.38
PVT1-207ENST00000518528 LTV1Q96GA3 475 aaPredicted RBP12.7□□□□□ -0.38
PVT1-207ENST00000518528 TMC1Q8TDI8 760 aa12.69□□□□□ -0.38
PVT1-207ENST00000518528 BTAF1O14981 1849 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms