RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 NUTM2EB1AL46 878 aaPredicted RBP17.68■□□□□ 0.42
PABPC1-205ENST00000518196 NUTM2AQ8IVF1 878 aaPredicted RBP17.68■□□□□ 0.42
PABPC1-205ENST00000518196 ANKRD26Q9UPS8 1709 aa17.67■□□□□ 0.42
PABPC1-205ENST00000518196 OVOS2A0A0J9YW53 1432 aa17.67■□□□□ 0.42
PABPC1-205ENST00000518196 OVOS2Q6IE36 1432 aa17.67■□□□□ 0.42
PABPC1-205ENST00000518196 CC2D1BQ5T0F9 858 aaKnown RBP17.67■□□□□ 0.42
PABPC1-205ENST00000518196 MORC1Q86VD1 984 aa17.67■□□□□ 0.42
PABPC1-205ENST00000518196 GCP02774 474 aa17.66■□□□□ 0.42
PABPC1-205ENST00000518196 CNGB1Q14028 1251 aaPredicted RBP17.66■□□□□ 0.42
PABPC1-205ENST00000518196 MARF1Q9Y4F3 1742 aaKnown RBP17.66■□□□□ 0.42
PABPC1-205ENST00000518196 PHRF1Q9P1Y6 1649 aaKnown RBP17.65■□□□□ 0.42
PABPC1-205ENST00000518196 SOX12O15370 315 aa17.65■□□□□ 0.42
PABPC1-205ENST00000518196 SLIT3O75094 1523 aa17.65■□□□□ 0.42
PABPC1-205ENST00000518196 CRYBG1Q9Y4K1 1723 aa17.64■□□□□ 0.41
PABPC1-205ENST00000518196 ABCA3Q99758 1704 aa17.64■□□□□ 0.41
PABPC1-205ENST00000518196 ZC3H6P61129 1189 aaKnown RBP17.62■□□□□ 0.41
PABPC1-205ENST00000518196 MEX3CQ5U5Q3 659 aaKnown RBP17.62■□□□□ 0.41
PABPC1-205ENST00000518196 ADAMTS2O95450 1211 aa17.61■□□□□ 0.41
PABPC1-205ENST00000518196 TNNT2P45379 298 aaPredicted RBP17.61■□□□□ 0.41
PABPC1-205ENST00000518196 ZBTB7CA1YPR0 619 aa17.6■□□□□ 0.41
PABPC1-205ENST00000518196 MAP2P11137 1827 aaKnown RBP17.59■□□□□ 0.41
PABPC1-205ENST00000518196 NFAT5O94916 1531 aa17.59■□□□□ 0.41
PABPC1-205ENST00000518196 PRDM11Q9NQV5 511 aa17.59■□□□□ 0.41
PABPC1-205ENST00000518196 CPDO75976 1380 aa17.58■□□□□ 0.4
PABPC1-205ENST00000518196 AATKQ6ZMQ8 1374 aa17.58■□□□□ 0.4
PABPC1-205ENST00000518196 KIAA0232Q92628 1395 aa17.58■□□□□ 0.4
PABPC1-205ENST00000518196 RALBP1Q15311 655 aa17.58■□□□□ 0.4
PABPC1-205ENST00000518196 ARHGEF25Q86VW2 580 aa17.58■□□□□ 0.4
PABPC1-205ENST00000518196 SPOCK2Q92563 424 aa17.58■□□□□ 0.4
PABPC1-205ENST00000518196 FBLN1P23142 703 aa17.57■□□□□ 0.4
PABPC1-205ENST00000518196 LRP6O75581 1613 aa17.57■□□□□ 0.4
PABPC1-205ENST00000518196 LTN1O94822 1766 aa17.56■□□□□ 0.4
PABPC1-205ENST00000518196 FAM83GA6ND36 823 aa17.56■□□□□ 0.4
PABPC1-205ENST00000518196 ANP32CO43423 234 aa17.56■□□□□ 0.4
PABPC1-205ENST00000518196 AMPHP49418 695 aa17.56■□□□□ 0.4
PABPC1-205ENST00000518196 RRS1Q15050 365 aaKnown RBP17.56■□□□□ 0.4
PABPC1-205ENST00000518196 PARD3Q8TEW0 1356 aa17.55■□□□□ 0.4
PABPC1-205ENST00000518196 MAP3K19Q56UN5 1328 aa17.55■□□□□ 0.4
PABPC1-205ENST00000518196 CHRNA2Q15822 529 aa17.55■□□□□ 0.4
PABPC1-205ENST00000518196 NGLY1Q96IV0 654 aa17.55■□□□□ 0.4
PABPC1-205ENST00000518196 C8orf37Q96NL8 207 aa17.55■□□□□ 0.4
PABPC1-205ENST00000518196 COL14A1Q05707 1796 aaKnown RBP17.54■□□□□ 0.4
PABPC1-205ENST00000518196 PPM1GO15355 546 aaPredicted RBP17.54■□□□□ 0.4
PABPC1-205ENST00000518196 PRR29P0C7W0 189 aa17.54■□□□□ 0.4
PABPC1-205ENST00000518196 POLKQ9UBT6 870 aa17.54■□□□□ 0.4
PABPC1-205ENST00000518196 DIEXFQ68CQ4 756 aaKnown RBP17.53■□□□□ 0.4
PABPC1-205ENST00000518196 PRKRIP1Q9H875 184 aaPredicted RBP17.53■□□□□ 0.4
PABPC1-205ENST00000518196 EMILIN1Q9Y6C2 1016 aa17.53■□□□□ 0.4
PABPC1-205ENST00000518196 KIF24Q5T7B8 1368 aa17.53■□□□□ 0.4
PABPC1-205ENST00000518196 PITPNM1O00562 1244 aa17.52■□□□□ 0.4
PABPC1-205ENST00000518196 IP6K1Q92551 441 aa17.52■□□□□ 0.4
PABPC1-205ENST00000518196 RTL1A6NKG5 1358 aa17.52■□□□□ 0.39
PABPC1-205ENST00000518196 PPP2R1AP30153 589 aa17.51■□□□□ 0.39
PABPC1-205ENST00000518196 HOXC9P31274 260 aa17.51■□□□□ 0.39
PABPC1-205ENST00000518196 MTHFSP49914 203 aa17.51■□□□□ 0.39
PABPC1-205ENST00000518196 ABCC6O95255 1503 aa17.51■□□□□ 0.39
PABPC1-205ENST00000518196 FLT4P35916 1363 aa17.51■□□□□ 0.39
PABPC1-205ENST00000518196 COL18A1P39060 1754 aa17.51■□□□□ 0.39
PABPC1-205ENST00000518196 EVA1CP58658 441 aa17.5■□□□□ 0.39
PABPC1-205ENST00000518196 BTG4Q9NY30 223 aa17.5■□□□□ 0.39
PABPC1-205ENST00000518196 MYBBP1AQ9BQG0 1328 aaKnown RBP17.49■□□□□ 0.39
PABPC1-205ENST00000518196 PLCH1Q4KWH8 1693 aa17.49■□□□□ 0.39
PABPC1-205ENST00000518196 RGPD5Q99666 1765 aa17.49■□□□□ 0.39
PABPC1-205ENST00000518196 FNBP4Q8N3X1 1017 aaPredicted RBP17.49■□□□□ 0.39
PABPC1-205ENST00000518196 AFF2P51816 1311 aa17.48■□□□□ 0.39
PABPC1-205ENST00000518196 BLMP54132 1417 aaPredicted RBP17.48■□□□□ 0.39
PABPC1-205ENST00000518196 SMG6Q86US8 1419 aaKnown RBP17.48■□□□□ 0.39
PABPC1-205ENST00000518196 NWD2Q9ULI1 1742 aa17.48■□□□□ 0.39
PABPC1-205ENST00000518196 CFAP53Q96M91 514 aa17.48■□□□□ 0.39
PABPC1-205ENST00000518196 USP21Q9UK80 565 aa17.48■□□□□ 0.39
PABPC1-205ENST00000518196 AXIN2Q9Y2T1 843 aa17.48■□□□□ 0.39
PABPC1-205ENST00000518196 LMO7Q8WWI1 1683 aa17.48■□□□□ 0.39
PABPC1-205ENST00000518196 SLIT2O94813 1529 aa17.47■□□□□ 0.39
PABPC1-205ENST00000518196 PEAK1Q9H792 1746 aa17.47■□□□□ 0.39
PABPC1-205ENST00000518196 HSP90AB2PQ58FF8 381 aa17.47■□□□□ 0.39
PABPC1-205ENST00000518196 INSRP06213 1382 aa17.47■□□□□ 0.39
PABPC1-205ENST00000518196 CAMTA1Q9Y6Y1 1673 aa17.47■□□□□ 0.39
PABPC1-205ENST00000518196 CDK12Q9NYV4 1490 aaPredicted RBP17.46■□□□□ 0.39
PABPC1-205ENST00000518196 CSB-PGBD3P0DP91 1061 aa17.46■□□□□ 0.39
PABPC1-205ENST00000518196 UNC5CLQ8IV45 518 aa17.46■□□□□ 0.39
PABPC1-205ENST00000518196 ANKRD24Q8TF21 1146 aa17.46■□□□□ 0.39
PABPC1-205ENST00000518196 STRN4Q9NRL3 753 aa17.46■□□□□ 0.39
PABPC1-205ENST00000518196 LTV1Q96GA3 475 aaPredicted RBP17.45■□□□□ 0.38
PABPC1-205ENST00000518196 ZNF772Q68DY9 489 aaPredicted RBP17.44■□□□□ 0.38
PABPC1-205ENST00000518196 ZBTB47Q9UFB7 747 aaPredicted RBP17.44■□□□□ 0.38
PABPC1-205ENST00000518196 COL5A2P05997 1499 aaPredicted RBP17.44■□□□□ 0.38
PABPC1-205ENST00000518196 NRAPQ86VF7 1730 aa17.43■□□□□ 0.38
PABPC1-205ENST00000518196 ERBB3P21860 1342 aa17.43■□□□□ 0.38
PABPC1-205ENST00000518196 BCL9LQ86UU0 1499 aa17.43■□□□□ 0.38
PABPC1-205ENST00000518196 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.42■□□□□ 0.38
PABPC1-205ENST00000518196 TOM1L2Q6ZVM7 507 aa17.42■□□□□ 0.38
PABPC1-205ENST00000518196 TRPC5Q9UL62 973 aaPredicted RBP17.42■□□□□ 0.38
PABPC1-205ENST00000518196 WDR17Q8IZU2 1322 aa17.42■□□□□ 0.38
PABPC1-205ENST00000518196 DIAPH1O60610 1272 aaKnown RBP17.41■□□□□ 0.38
PABPC1-205ENST00000518196 EIF4A2Q14240 407 aaKnown RBP17.41■□□□□ 0.38
PABPC1-205ENST00000518196 LARP1Q6PKG0 1096 aaKnown RBP17.41■□□□□ 0.38
PABPC1-205ENST00000518196 CCDC9Q9Y3X0 531 aaKnown RBP17.41■□□□□ 0.38
PABPC1-205ENST00000518196 FAM208AQ9UK61 1670 aaKnown RBP17.4■□□□□ 0.38
PABPC1-205ENST00000518196 VPS72Q15906 364 aa17.4■□□□□ 0.38
PABPC1-205ENST00000518196 QTRT2Q9H974 415 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms