RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 DLG5Q8TDM6 1919 aa14.14□□□□□ -0.15
PABPC1-203ENST00000517921 NUTM2BA6NNL0 878 aaPredicted RBP14.14□□□□□ -0.15
PABPC1-203ENST00000517921 NUTM2EB1AL46 878 aaPredicted RBP14.14□□□□□ -0.15
PABPC1-203ENST00000517921 PPM1GO15355 546 aaPredicted RBP14.14□□□□□ -0.15
PABPC1-203ENST00000517921 NUTM2AQ8IVF1 878 aaPredicted RBP14.14□□□□□ -0.15
PABPC1-203ENST00000517921 ADAMTS8Q9UP79 889 aa14.14□□□□□ -0.15
PABPC1-203ENST00000517921 ABCC6O95255 1503 aa14.14□□□□□ -0.15
PABPC1-203ENST00000517921 FAM208AQ9UK61 1670 aaKnown RBP14.14□□□□□ -0.15
PABPC1-203ENST00000517921 KCNH5Q8NCM2 988 aa14.13□□□□□ -0.15
PABPC1-203ENST00000517921 CAMTA1Q9Y6Y1 1673 aa14.13□□□□□ -0.15
PABPC1-203ENST00000517921 DIAPH1O60610 1272 aaKnown RBP14.12□□□□□ -0.15
PABPC1-203ENST00000517921 LMO7Q8WWI1 1683 aa14.11□□□□□ -0.15
PABPC1-203ENST00000517921 GCP02774 474 aa14.11□□□□□ -0.15
PABPC1-203ENST00000517921 HNRNPUQ00839 825 aaKnown RBP eCLIP14.11□□□□□ -0.15
PABPC1-203ENST00000517921 POTEAQ6S8J7 498 aa14.11□□□□□ -0.15
PABPC1-203ENST00000517921 HOXC9P31274 260 aa14.1□□□□□ -0.15
PABPC1-203ENST00000517921 IL13P35225 146 aa14.1□□□□□ -0.15
PABPC1-203ENST00000517921 VIRMAQ69YN4 1812 aaKnown RBP14.09□□□□□ -0.15
PABPC1-203ENST00000517921 AMPHP49418 695 aa14.09□□□□□ -0.15
PABPC1-203ENST00000517921 EIF4A2Q14240 407 aaKnown RBP14.09□□□□□ -0.15
PABPC1-203ENST00000517921 HSP90AB2PQ58FF8 381 aa14.09□□□□□ -0.15
PABPC1-203ENST00000517921 NUDCQ9Y266 331 aa14.09□□□□□ -0.15
PABPC1-203ENST00000517921 PLEKHG5O94827 1062 aa14.08□□□□□ -0.16
PABPC1-203ENST00000517921 ZNF772Q68DY9 489 aaPredicted RBP14.08□□□□□ -0.16
PABPC1-203ENST00000517921 ARHGEF25Q86VW2 580 aa14.08□□□□□ -0.16
PABPC1-203ENST00000517921 U2SURPO15042 1029 aaKnown RBP14.07□□□□□ -0.16
PABPC1-203ENST00000517921 U2AF1L5P0DN76 240 aaPredicted RBP14.07□□□□□ -0.16
PABPC1-203ENST00000517921 U2AF1Q01081 240 aaKnown RBP eCLIP14.07□□□□□ -0.16
PABPC1-203ENST00000517921 CABLES1Q8TDN4 633 aa14.07□□□□□ -0.16
PABPC1-203ENST00000517921 IP6K1Q92551 441 aa14.07□□□□□ -0.16
PABPC1-203ENST00000517921 ZBED9Q6R2W3 1325 aa14.07□□□□□ -0.16
PABPC1-203ENST00000517921 CPDO75976 1380 aa14.07□□□□□ -0.16
PABPC1-203ENST00000517921 LRP6O75581 1613 aa14.06□□□□□ -0.16
PABPC1-203ENST00000517921 CCDC146Q8IYE0 955 aa14.06□□□□□ -0.16
PABPC1-203ENST00000517921 PLCH1Q4KWH8 1693 aa14.06□□□□□ -0.16
PABPC1-203ENST00000517921 COL14A1Q05707 1796 aaKnown RBP14.06□□□□□ -0.16
PABPC1-203ENST00000517921 KIAA0232Q92628 1395 aa14.05□□□□□ -0.16
PABPC1-203ENST00000517921 ZC3H6P61129 1189 aaKnown RBP14.04□□□□□ -0.16
PABPC1-203ENST00000517921 C8orf37Q96NL8 207 aa14.04□□□□□ -0.16
PABPC1-203ENST00000517921 RSPH6AQ9H0K4 717 aa14.04□□□□□ -0.16
PABPC1-203ENST00000517921 SENP3-EIF4A1A0A087X0R7 540 aa14.03□□□□□ -0.16
PABPC1-203ENST00000517921 ZBTB7CA1YPR0 619 aa14.03□□□□□ -0.16
PABPC1-203ENST00000517921 ADAMTS2O95450 1211 aa14.03□□□□□ -0.16
PABPC1-203ENST00000517921 RUNDC1Q96C34 613 aa14.03□□□□□ -0.16
PABPC1-203ENST00000517921 PLEKHF1Q96S99 279 aa14.03□□□□□ -0.16
PABPC1-203ENST00000517921 IGSF1Q8N6C5 1336 aa14.03□□□□□ -0.16
PABPC1-203ENST00000517921 KDRP35968 1356 aa14.03□□□□□ -0.16
PABPC1-203ENST00000517921 NCAPD2Q15021 1401 aa14.03□□□□□ -0.16
PABPC1-203ENST00000517921 NRAPQ86VF7 1730 aa14.03□□□□□ -0.16
PABPC1-203ENST00000517921 WNK3Q9BYP7 1800 aa14.02□□□□□ -0.16
PABPC1-203ENST00000517921 AFF2P51816 1311 aa14.02□□□□□ -0.17
PABPC1-203ENST00000517921 CENPBP07199 599 aaPredicted RBP14.02□□□□□ -0.17
PABPC1-203ENST00000517921 NGLY1Q96IV0 654 aa14.02□□□□□ -0.17
PABPC1-203ENST00000517921 NWD2Q9ULI1 1742 aa14.01□□□□□ -0.17
PABPC1-203ENST00000517921 APAF1O14727 1248 aa14.01□□□□□ -0.17
PABPC1-203ENST00000517921 FCHSD2O94868 740 aa14.01□□□□□ -0.17
PABPC1-203ENST00000517921 HMOX1P09601 288 aa14.01□□□□□ -0.17
PABPC1-203ENST00000517921 AXIN2Q9Y2T1 843 aa14.01□□□□□ -0.17
PABPC1-203ENST00000517921 RXRBP28702 533 aa14□□□□□ -0.17
PABPC1-203ENST00000517921 PRKAR2BP31323 418 aa14□□□□□ -0.17
PABPC1-203ENST00000517921 AEBP1Q8IUX7 1158 aa14□□□□□ -0.17
PABPC1-203ENST00000517921 LTV1Q96GA3 475 aaPredicted RBP14□□□□□ -0.17
PABPC1-203ENST00000517921 EYA1Q99502 592 aa14□□□□□ -0.17
PABPC1-203ENST00000517921 PARP4Q9UKK3 1724 aaKnown RBP13.99□□□□□ -0.17
PABPC1-203ENST00000517921 ERBB3P21860 1342 aa13.99□□□□□ -0.17
PABPC1-203ENST00000517921 HAP1P54257 671 aaPredicted RBP13.99□□□□□ -0.17
PABPC1-203ENST00000517921 CHRNA2Q15822 529 aa13.99□□□□□ -0.17
PABPC1-203ENST00000517921 SULT6B1Q6IMI4 303 aa13.99□□□□□ -0.17
PABPC1-203ENST00000517921 COL5A2P05997 1499 aaPredicted RBP13.99□□□□□ -0.17
PABPC1-203ENST00000517921 ZNF521Q96K83 1311 aa13.98□□□□□ -0.17
PABPC1-203ENST00000517921 MAPK8IP3Q9UPT6 1336 aa13.98□□□□□ -0.17
PABPC1-203ENST00000517921 TCP11L2Q8N4U5 519 aa13.98□□□□□ -0.17
PABPC1-203ENST00000517921 ANKRD24Q8TF21 1146 aa13.98□□□□□ -0.17
PABPC1-203ENST00000517921 PNNQ9H307 717 aaKnown RBP13.98□□□□□ -0.17
PABPC1-203ENST00000517921 QTRT2Q9H974 415 aaKnown RBP13.98□□□□□ -0.17
PABPC1-203ENST00000517921 PKD1L3Q7Z443 1732 aa13.98□□□□□ -0.17
PABPC1-203ENST00000517921 PRDM11Q9NQV5 511 aa13.97□□□□□ -0.17
PABPC1-203ENST00000517921 SALL2Q9Y467 1007 aaPredicted RBP13.97□□□□□ -0.17
PABPC1-203ENST00000517921 SHANK3Q9BYB0 1731 aa13.96□□□□□ -0.17
PABPC1-203ENST00000517921 NBPF6Q5VWK0 638 aa13.96□□□□□ -0.17
PABPC1-203ENST00000517921 NGEFQ8N5V2 710 aa13.96□□□□□ -0.17
PABPC1-203ENST00000517921 NBPF4Q96M43 638 aa13.96□□□□□ -0.17
PABPC1-203ENST00000517921 LRRC37A3O60309 1634 aa13.95□□□□□ -0.18
PABPC1-203ENST00000517921 TMPOP42166 694 aaKnown RBP13.95□□□□□ -0.18
PABPC1-203ENST00000517921 NCBP3Q53F19 620 aaKnown RBP13.95□□□□□ -0.18
PABPC1-203ENST00000517921 USP21Q9UK80 565 aa13.95□□□□□ -0.18
PABPC1-203ENST00000517921 RRP7AQ9Y3A4 280 aaKnown RBP13.95□□□□□ -0.18
PABPC1-203ENST00000517921 RBM6P78332 1123 aaKnown RBP13.94□□□□□ -0.18
PABPC1-203ENST00000517921 USHBP1Q8N6Y0 703 aa13.94□□□□□ -0.18
PABPC1-203ENST00000517921 PHACTR3Q96KR7 559 aa13.94□□□□□ -0.18
PABPC1-203ENST00000517921 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.94□□□□□ -0.18
PABPC1-203ENST00000517921 NEFMP07197 916 aa13.93□□□□□ -0.18
PABPC1-203ENST00000517921 CCDC27Q2M243 656 aa13.93□□□□□ -0.18
PABPC1-203ENST00000517921 SCN11AQ9UI33 1791 aa13.93□□□□□ -0.18
PABPC1-203ENST00000517921 FAM83GA6ND36 823 aa13.92□□□□□ -0.18
PABPC1-203ENST00000517921 PDE3BQ13370 1112 aa13.92□□□□□ -0.18
PABPC1-203ENST00000517921 NEUROD2Q15784 382 aa13.92□□□□□ -0.18
PABPC1-203ENST00000517921 NFE2L2Q16236 605 aa13.92□□□□□ -0.18
PABPC1-203ENST00000517921 TRPC5Q9UL62 973 aaPredicted RBP13.92□□□□□ -0.18
PABPC1-203ENST00000517921 WDR17Q8IZU2 1322 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms