RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 DIEXFQ68CQ4 756 aaKnown RBP13.44□□□□□ -0.26
CLN8-202ENST00000517514 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.44□□□□□ -0.26
CLN8-202ENST00000517514 BCL9LQ86UU0 1499 aa13.43□□□□□ -0.26
CLN8-202ENST00000517514 CDK12Q9NYV4 1490 aaPredicted RBP13.43□□□□□ -0.26
CLN8-202ENST00000517514 HOXC9P31274 260 aa13.43□□□□□ -0.26
CLN8-202ENST00000517514 MTHFSP49914 203 aa13.43□□□□□ -0.26
CLN8-202ENST00000517514 HAP1P54257 671 aaPredicted RBP13.43□□□□□ -0.26
CLN8-202ENST00000517514 IP6K1Q92551 441 aa13.43□□□□□ -0.26
CLN8-202ENST00000517514 PRDM11Q9NQV5 511 aa13.43□□□□□ -0.26
CLN8-202ENST00000517514 RTL1A6NKG5 1358 aa13.43□□□□□ -0.26
CLN8-202ENST00000517514 INSRP06213 1382 aa13.43□□□□□ -0.26
CLN8-202ENST00000517514 KIF24Q5T7B8 1368 aa13.43□□□□□ -0.26
CLN8-202ENST00000517514 COL5A2P05997 1499 aaPredicted RBP13.42□□□□□ -0.26
CLN8-202ENST00000517514 RGPD1P0DJD0 1748 aa13.42□□□□□ -0.26
CLN8-202ENST00000517514 CCDC184Q52MB2 194 aa13.42□□□□□ -0.26
CLN8-202ENST00000517514 HSP90AB2PQ58FF8 381 aa13.42□□□□□ -0.26
CLN8-202ENST00000517514 FNBP4Q8N3X1 1017 aaPredicted RBP13.42□□□□□ -0.26
CLN8-202ENST00000517514 ZBTB7CA1YPR0 619 aa13.41□□□□□ -0.26
CLN8-202ENST00000517514 C8orf37Q96NL8 207 aa13.41□□□□□ -0.26
CLN8-202ENST00000517514 FLT4P35916 1363 aa13.41□□□□□ -0.26
CLN8-202ENST00000517514 FAM208AQ9UK61 1670 aaKnown RBP13.4□□□□□ -0.26
CLN8-202ENST00000517514 MYBBP1AQ9BQG0 1328 aaKnown RBP13.4□□□□□ -0.26
CLN8-202ENST00000517514 BLMP54132 1417 aaPredicted RBP13.4□□□□□ -0.26
CLN8-202ENST00000517514 AMPHP49418 695 aa13.4□□□□□ -0.26
CLN8-202ENST00000517514 BTG4Q9NY30 223 aa13.4□□□□□ -0.26
CLN8-202ENST00000517514 PPM1GO15355 546 aaPredicted RBP13.39□□□□□ -0.27
CLN8-202ENST00000517514 RGS17Q9UGC6 210 aaPredicted RBP13.39□□□□□ -0.27
CLN8-202ENST00000517514 ERBB3P21860 1342 aa13.39□□□□□ -0.27
CLN8-202ENST00000517514 AFF2P51816 1311 aa13.39□□□□□ -0.27
CLN8-202ENST00000517514 ANP32CO43423 234 aa13.38□□□□□ -0.27
CLN8-202ENST00000517514 NGLY1Q96IV0 654 aa13.38□□□□□ -0.27
CLN8-202ENST00000517514 WNK3Q9BYP7 1800 aa13.37□□□□□ -0.27
CLN8-202ENST00000517514 IL13P35225 146 aa13.37□□□□□ -0.27
CLN8-202ENST00000517514 EIF4A2Q14240 407 aaKnown RBP13.37□□□□□ -0.27
CLN8-202ENST00000517514 MEX3CQ5U5Q3 659 aaKnown RBP13.37□□□□□ -0.27
CLN8-202ENST00000517514 MIER1Q8N108 512 aa13.37□□□□□ -0.27
CLN8-202ENST00000517514 ANKRD24Q8TF21 1146 aa13.37□□□□□ -0.27
CLN8-202ENST00000517514 ATRNO75882 1429 aa13.37□□□□□ -0.27
CLN8-202ENST00000517514 NCAPD2Q15021 1401 aa13.37□□□□□ -0.27
CLN8-202ENST00000517514 GLI3P10071 1580 aa13.37□□□□□ -0.27
CLN8-202ENST00000517514 LARP1Q6PKG0 1096 aaKnown RBP13.36□□□□□ -0.27
CLN8-202ENST00000517514 UNC5CLQ8IV45 518 aa13.36□□□□□ -0.27
CLN8-202ENST00000517514 WDR17Q8IZU2 1322 aa13.36□□□□□ -0.27
CLN8-202ENST00000517514 LTV1Q96GA3 475 aaPredicted RBP13.35□□□□□ -0.27
CLN8-202ENST00000517514 NBPF6Q5VWK0 638 aa13.34□□□□□ -0.27
CLN8-202ENST00000517514 NBPF4Q96M43 638 aa13.34□□□□□ -0.27
CLN8-202ENST00000517514 EYA1Q99502 592 aa13.34□□□□□ -0.27
CLN8-202ENST00000517514 STRN4Q9NRL3 753 aa13.34□□□□□ -0.27
CLN8-202ENST00000517514 USP21Q9UK80 565 aa13.34□□□□□ -0.27
CLN8-202ENST00000517514 CRB1P82279 1406 aa13.33□□□□□ -0.28
CLN8-202ENST00000517514 VPS72Q15906 364 aa13.32□□□□□ -0.28
CLN8-202ENST00000517514 SPATA31A1Q5TZJ5 1347 aa13.32□□□□□ -0.28
CLN8-202ENST00000517514 SPATA31A5Q5VU36 1347 aa13.32□□□□□ -0.28
CLN8-202ENST00000517514 SPATA31A7Q8IWB4 1347 aa13.32□□□□□ -0.28
CLN8-202ENST00000517514 IGSF1Q8N6C5 1336 aa13.32□□□□□ -0.28
CLN8-202ENST00000517514 SHANK3Q9BYB0 1731 aa13.31□□□□□ -0.28
CLN8-202ENST00000517514 DIAPH1O60610 1272 aaKnown RBP13.31□□□□□ -0.28
CLN8-202ENST00000517514 EVA1CP58658 441 aa13.31□□□□□ -0.28
CLN8-202ENST00000517514 POTEAQ6S8J7 498 aa13.31□□□□□ -0.28
CLN8-202ENST00000517514 USHBP1Q8N6Y0 703 aa13.31□□□□□ -0.28
CLN8-202ENST00000517514 THSD7AQ9UPZ6 1657 aa13.31□□□□□ -0.28
CLN8-202ENST00000517514 DISP2A7MBM2 1401 aa13.3□□□□□ -0.28
CLN8-202ENST00000517514 AEBP1Q8IUX7 1158 aa13.3□□□□□ -0.28
CLN8-202ENST00000517514 CARD10Q9BWT7 1032 aa13.3□□□□□ -0.28
CLN8-202ENST00000517514 MEGF6O75095 1541 aa13.29□□□□□ -0.28
CLN8-202ENST00000517514 TOM1L2Q6ZVM7 507 aa13.29□□□□□ -0.28
CLN8-202ENST00000517514 CFAP53Q96M91 514 aa13.29□□□□□ -0.28
CLN8-202ENST00000517514 QTRT2Q9H974 415 aaKnown RBP13.29□□□□□ -0.28
CLN8-202ENST00000517514 NLRP2Q9NX02 1062 aa13.29□□□□□ -0.28
CLN8-202ENST00000517514 KDRP35968 1356 aa13.29□□□□□ -0.28
CLN8-202ENST00000517514 PKD1L3Q7Z443 1732 aa13.28□□□□□ -0.28
CLN8-202ENST00000517514 PARP4Q9UKK3 1724 aaKnown RBP13.28□□□□□ -0.28
CLN8-202ENST00000517514 BRWD3Q6RI45 1802 aa13.28□□□□□ -0.28
CLN8-202ENST00000517514 CSB-PGBD3P0DP91 1061 aa13.28□□□□□ -0.28
CLN8-202ENST00000517514 GJD4Q96KN9 370 aaPredicted RBP13.28□□□□□ -0.28
CLN8-202ENST00000517514 TRPC5Q9UL62 973 aaPredicted RBP13.28□□□□□ -0.28
CLN8-202ENST00000517514 CCER2I3L3R5 266 aa13.27□□□□□ -0.29
CLN8-202ENST00000517514 ZNF772Q68DY9 489 aaPredicted RBP13.27□□□□□ -0.29
CLN8-202ENST00000517514 PNISRQ8TF01 805 aaKnown RBP13.27□□□□□ -0.29
CLN8-202ENST00000517514 MRS2Q9HD23 443 aa13.27□□□□□ -0.29
CLN8-202ENST00000517514 LRRC37A3O60309 1634 aa13.27□□□□□ -0.29
CLN8-202ENST00000517514 TCP11L2Q8N4U5 519 aa13.26□□□□□ -0.29
CLN8-202ENST00000517514 RSPH6AQ9H0K4 717 aa13.26□□□□□ -0.29
CLN8-202ENST00000517514 USP35Q9P2H5 1018 aa13.26□□□□□ -0.29
CLN8-202ENST00000517514 U2SURPO15042 1029 aaKnown RBP13.25□□□□□ -0.29
CLN8-202ENST00000517514 ONECUT3O60422 494 aaPredicted RBP13.25□□□□□ -0.29
CLN8-202ENST00000517514 HMOX1P09601 288 aa13.25□□□□□ -0.29
CLN8-202ENST00000517514 SULT6B1Q6IMI4 303 aa13.25□□□□□ -0.29
CLN8-202ENST00000517514 ADAMTS8Q9UP79 889 aa13.25□□□□□ -0.29
CLN8-202ENST00000517514 OVOS2A0A0G2JMS6 1433 aa13.24□□□□□ -0.29
CLN8-202ENST00000517514 BARGINQ6ZT62 677 aa13.24□□□□□ -0.29
CLN8-202ENST00000517514 THRAP3Q9Y2W1 955 aaKnown RBP13.24□□□□□ -0.29
CLN8-202ENST00000517514 DLG5Q8TDM6 1919 aa13.23□□□□□ -0.29
CLN8-202ENST00000517514 U2AF1L5P0DN76 240 aaPredicted RBP13.23□□□□□ -0.29
CLN8-202ENST00000517514 U2AF1Q01081 240 aaKnown RBP eCLIP13.23□□□□□ -0.29
CLN8-202ENST00000517514 FAM98CQ17RN3 349 aaKnown RBP13.23□□□□□ -0.29
CLN8-202ENST00000517514 PLEKHF1Q96S99 279 aa13.23□□□□□ -0.29
CLN8-202ENST00000517514 NUDCQ9Y266 331 aa13.23□□□□□ -0.29
CLN8-202ENST00000517514 CCDC9Q9Y3X0 531 aaKnown RBP13.23□□□□□ -0.29
CLN8-202ENST00000517514 VIRMAQ69YN4 1812 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms