RNA–Protein interactions for RNA: ENST00000517386.1

HMBOX1-204, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-204ENST00000517386 ATXN8OSP0DMR3 200 aa11.4□□□□□ -0.58
HMBOX1-204ENST00000517386 SRPK2P78362 688 aaKnown RBP11.4□□□□□ -0.58
HMBOX1-204ENST00000517386 MKRN4PQ13434 485 aaPredicted RBP11.4□□□□□ -0.58
HMBOX1-204ENST00000517386 LARP1Q6PKG0 1096 aaKnown RBP11.4□□□□□ -0.58
HMBOX1-204ENST00000517386 ABTB2Q8N961 1025 aa11.4□□□□□ -0.58
HMBOX1-204ENST00000517386 CABP2Q9NPB3 220 aa11.4□□□□□ -0.58
HMBOX1-204ENST00000517386 APBA3O96018 575 aa11.39□□□□□ -0.59
HMBOX1-204ENST00000517386 CRYBG1Q9Y4K1 1723 aa11.39□□□□□ -0.59
HMBOX1-204ENST00000517386 PELP1Q8IZL8 1130 aaKnown RBP11.38□□□□□ -0.59
HMBOX1-204ENST00000517386 CCDC61Q9Y6R9 512 aa11.38□□□□□ -0.59
HMBOX1-204ENST00000517386 THSD7AQ9UPZ6 1657 aa11.37□□□□□ -0.59
HMBOX1-204ENST00000517386 POTEJP0CG39 1038 aa11.37□□□□□ -0.59
HMBOX1-204ENST00000517386 PDE3BQ13370 1112 aa11.37□□□□□ -0.59
HMBOX1-204ENST00000517386 PHRF1Q9P1Y6 1649 aaKnown RBP11.37□□□□□ -0.59
HMBOX1-204ENST00000517386 SSH2Q76I76 1423 aa11.36□□□□□ -0.59
HMBOX1-204ENST00000517386 PLEKHG3A1L390 1219 aa11.36□□□□□ -0.59
HMBOX1-204ENST00000517386 FAM196AQ6ZSG2 479 aa11.36□□□□□ -0.59
HMBOX1-204ENST00000517386 STAC3Q96MF2 364 aa11.36□□□□□ -0.59
HMBOX1-204ENST00000517386 CAMKK2Q96RR4 588 aa11.36□□□□□ -0.59
HMBOX1-204ENST00000517386 POLR3AO14802 1390 aaPredicted RBP11.36□□□□□ -0.59
HMBOX1-204ENST00000517386 CAMTA1Q9Y6Y1 1673 aa11.36□□□□□ -0.59
HMBOX1-204ENST00000517386 PPIP5K1Q6PFW1 1433 aa11.35□□□□□ -0.59
HMBOX1-204ENST00000517386 RGPD1P0DJD0 1748 aa11.35□□□□□ -0.59
HMBOX1-204ENST00000517386 ITSN1Q15811 1721 aa11.35□□□□□ -0.59
HMBOX1-204ENST00000517386 SOX12O15370 315 aa11.35□□□□□ -0.59
HMBOX1-204ENST00000517386 CABP1Q9NZU7 370 aa11.35□□□□□ -0.59
HMBOX1-204ENST00000517386 CENPJQ9HC77 1338 aaPredicted RBP11.35□□□□□ -0.59
HMBOX1-204ENST00000517386 GCP02774 474 aa11.34□□□□□ -0.59
HMBOX1-204ENST00000517386 TCP11L2Q8N4U5 519 aa11.34□□□□□ -0.59
HMBOX1-204ENST00000517386 TNS1Q9HBL0 1735 aaKnown RBP11.34□□□□□ -0.59
HMBOX1-204ENST00000517386 TOPAZ1Q8N9V7 1692 aa11.33□□□□□ -0.6
HMBOX1-204ENST00000517386 NRKQ7Z2Y5 1582 aa11.33□□□□□ -0.6
HMBOX1-204ENST00000517386 NLRP6P59044 892 aa11.33□□□□□ -0.6
HMBOX1-204ENST00000517386 NLRP13Q86W25 1043 aa11.33□□□□□ -0.6
HMBOX1-204ENST00000517386 LRP5O75197 1615 aa11.33□□□□□ -0.6
HMBOX1-204ENST00000517386 USP19O94966 1318 aa11.33□□□□□ -0.6
HMBOX1-204ENST00000517386 NEUROD1Q13562 356 aa11.32□□□□□ -0.6
HMBOX1-204ENST00000517386 BARGINQ6ZT62 677 aa11.32□□□□□ -0.6
HMBOX1-204ENST00000517386 SIN3AQ96ST3 1273 aa11.32□□□□□ -0.6
HMBOX1-204ENST00000517386 PTF1AQ7RTS3 328 aa11.31□□□□□ -0.6
HMBOX1-204ENST00000517386 L3MBTL2Q969R5 705 aa11.31□□□□□ -0.6
HMBOX1-204ENST00000517386 DISP2A7MBM2 1401 aa11.31□□□□□ -0.6
HMBOX1-204ENST00000517386 CPDO75976 1380 aa11.29□□□□□ -0.6
HMBOX1-204ENST00000517386 TOM1L2Q6ZVM7 507 aa11.29□□□□□ -0.6
HMBOX1-204ENST00000517386 AXIN2Q9Y2T1 843 aa11.29□□□□□ -0.6
HMBOX1-204ENST00000517386 COL5A2P05997 1499 aaPredicted RBP11.29□□□□□ -0.6
HMBOX1-204ENST00000517386 LMO7Q8WWI1 1683 aa11.29□□□□□ -0.6
HMBOX1-204ENST00000517386 QRICH2Q9H0J4 1663 aa11.28□□□□□ -0.6
HMBOX1-204ENST00000517386 NBPF14Q5TI25 921 aa11.28□□□□□ -0.6
HMBOX1-204ENST00000517386 USP6P35125 1406 aa11.27□□□□□ -0.6
HMBOX1-204ENST00000517386 KIAA1210Q9ULL0 1709 aa11.27□□□□□ -0.61
HMBOX1-204ENST00000517386 CRB1P82279 1406 aa11.26□□□□□ -0.61
HMBOX1-204ENST00000517386 CSB-PGBD3P0DP91 1061 aa11.26□□□□□ -0.61
HMBOX1-204ENST00000517386 DDB1Q16531 1140 aa11.26□□□□□ -0.61
HMBOX1-204ENST00000517386 PDGFDQ9GZP0 370 aaPredicted RBP11.26□□□□□ -0.61
HMBOX1-204ENST00000517386 PPP1R1BQ9UD71 204 aaPredicted RBP11.26□□□□□ -0.61
HMBOX1-204ENST00000517386 THRAP3Q9Y2W1 955 aaKnown RBP11.26□□□□□ -0.61
HMBOX1-204ENST00000517386 EVC2Q86UK5 1308 aa11.26□□□□□ -0.61
HMBOX1-204ENST00000517386 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.25□□□□□ -0.61
HMBOX1-204ENST00000517386 MARCH10Q8NA82 808 aaPredicted RBP11.25□□□□□ -0.61
HMBOX1-204ENST00000517386 ANO8Q9HCE9 1232 aaPredicted RBP11.25□□□□□ -0.61
HMBOX1-204ENST00000517386 NUP188Q5SRE5 1749 aa11.25□□□□□ -0.61
HMBOX1-204ENST00000517386 TTC21BQ7Z4L5 1316 aa11.25□□□□□ -0.61
HMBOX1-204ENST00000517386 AATKQ6ZMQ8 1374 aa11.25□□□□□ -0.61
HMBOX1-204ENST00000517386 PARD3Q8TEW0 1356 aa11.25□□□□□ -0.61
HMBOX1-204ENST00000517386 ROCK2O75116 1388 aaKnown RBP11.24□□□□□ -0.61
HMBOX1-204ENST00000517386 OVOS2A0A0G2JMS6 1433 aa11.24□□□□□ -0.61
HMBOX1-204ENST00000517386 OVOS2A0A0J9YW53 1432 aa11.24□□□□□ -0.61
HMBOX1-204ENST00000517386 OVOS2Q6IE36 1432 aa11.24□□□□□ -0.61
HMBOX1-204ENST00000517386 PIK3C2AO00443 1686 aa11.24□□□□□ -0.61
HMBOX1-204ENST00000517386 CDAN1Q8IWY9 1227 aa11.23□□□□□ -0.61
HMBOX1-204ENST00000517386 BCL11BQ9C0K0 894 aaPredicted RBP11.23□□□□□ -0.61
HMBOX1-204ENST00000517386 WDR17Q8IZU2 1322 aa11.23□□□□□ -0.61
HMBOX1-204ENST00000517386 SLIT3O75094 1523 aa11.23□□□□□ -0.61
HMBOX1-204ENST00000517386 RREB1Q92766 1687 aa11.23□□□□□ -0.61
HMBOX1-204ENST00000517386 KCNQ2O43526 872 aa11.22□□□□□ -0.61
HMBOX1-204ENST00000517386 ZBTB7AO95365 584 aa11.22□□□□□ -0.61
HMBOX1-204ENST00000517386 CPSF1Q10570 1443 aaKnown RBP11.22□□□□□ -0.61
HMBOX1-204ENST00000517386 ARHGEF25Q86VW2 580 aa11.22□□□□□ -0.61
HMBOX1-204ENST00000517386 SPON1Q9HCB6 807 aa11.22□□□□□ -0.61
HMBOX1-204ENST00000517386 METRNQ9UJH8 293 aa11.22□□□□□ -0.61
HMBOX1-204ENST00000517386 PARP4Q9UKK3 1724 aaKnown RBP11.22□□□□□ -0.61
HMBOX1-204ENST00000517386 LRRC37A3O60309 1634 aa11.21□□□□□ -0.61
HMBOX1-204ENST00000517386 KTN1Q86UP2 1357 aaKnown RBP11.21□□□□□ -0.61
HMBOX1-204ENST00000517386 YY1P25490 414 aa11.21□□□□□ -0.61
HMBOX1-204ENST00000517386 PROM2Q8N271 834 aa11.21□□□□□ -0.61
HMBOX1-204ENST00000517386 TMC1Q8TDI8 760 aa11.21□□□□□ -0.61
HMBOX1-204ENST00000517386 ACSBG1Q96GR2 724 aa11.21□□□□□ -0.61
HMBOX1-204ENST00000517386 BRD4O60885 1362 aaPredicted RBP11.2□□□□□ -0.62
HMBOX1-204ENST00000517386 NME9Q86XW9 330 aa11.2□□□□□ -0.62
HMBOX1-204ENST00000517386 PHF12Q96QT6 1004 aa11.2□□□□□ -0.62
HMBOX1-204ENST00000517386 COL18A1P39060 1754 aa11.2□□□□□ -0.62
HMBOX1-204ENST00000517386 RGPD5Q99666 1765 aa11.2□□□□□ -0.62
HMBOX1-204ENST00000517386 PEAK1Q9H792 1746 aa11.2□□□□□ -0.62
HMBOX1-204ENST00000517386 TRPM1Q7Z4N2 1603 aa11.2□□□□□ -0.62
HMBOX1-204ENST00000517386 EXOC5O00471 708 aa11.19□□□□□ -0.62
HMBOX1-204ENST00000517386 MAMSTRQ6ZN01 415 aa11.19□□□□□ -0.62
HMBOX1-204ENST00000517386 KCNH5Q8NCM2 988 aa11.19□□□□□ -0.62
HMBOX1-204ENST00000517386 CARD10Q9BWT7 1032 aa11.19□□□□□ -0.62
HMBOX1-204ENST00000517386 NLRP2Q9NX02 1062 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms