RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 CSPP1Q1MSJ5 1256 aa4.56□□□□□ -1.68
RNU6-561P-201ENST00000516222 GPAT2Q6NUI2 795 aa4.56□□□□□ -1.68
RNU6-561P-201ENST00000516222 BARGINQ6ZT62 677 aa4.56□□□□□ -1.68
RNU6-561P-201ENST00000516222 TRMT44Q8IYL2 757 aaKnown RBP4.56□□□□□ -1.68
RNU6-561P-201ENST00000516222 CCDC155Q8N6L0 562 aa4.56□□□□□ -1.68
RNU6-561P-201ENST00000516222 DNMT3AQ9Y6K1 912 aaPredicted RBP4.56□□□□□ -1.68
RNU6-561P-201ENST00000516222 CDC14CA4D256 554 aa4.55□□□□□ -1.68
RNU6-561P-201ENST00000516222 C4orf48Q5BLP8 95 aa4.55□□□□□ -1.68
RNU6-561P-201ENST00000516222 SPINT1O43278 529 aa4.54□□□□□ -1.68
RNU6-561P-201ENST00000516222 ZMYND10O75800 440 aa4.54□□□□□ -1.68
RNU6-561P-201ENST00000516222 GSK3AP49840 483 aa4.54□□□□□ -1.68
RNU6-561P-201ENST00000516222 FOXR1Q6PIV2 292 aa4.54□□□□□ -1.68
RNU6-561P-201ENST00000516222 SH3RF1Q7Z6J0 888 aa4.54□□□□□ -1.68
RNU6-561P-201ENST00000516222 VWA5B2Q8N398 1253 aa4.54□□□□□ -1.68
RNU6-561P-201ENST00000516222 GPR161Q8N6U8 529 aaKnown RBP4.54□□□□□ -1.68
RNU6-561P-201ENST00000516222 C1QTNF2Q9BXJ5 285 aa4.54□□□□□ -1.68
RNU6-561P-201ENST00000516222 CARD14Q9BXL6 1004 aa4.54□□□□□ -1.68
RNU6-561P-201ENST00000516222 PER1O15534 1290 aaPredicted RBP4.53□□□□□ -1.68
RNU6-561P-201ENST00000516222 SLURP2P0DP57 97 aa4.53□□□□□ -1.68
RNU6-561P-201ENST00000516222 ITGA6P23229 1130 aa4.53□□□□□ -1.68
RNU6-561P-201ENST00000516222 PPP1R26Q5T8A7 1209 aaPredicted RBP4.53□□□□□ -1.68
RNU6-561P-201ENST00000516222 ZNF385CQ66K41 422 aaPredicted RBP4.53□□□□□ -1.68
RNU6-561P-201ENST00000516222 Q6ZVU0 165 aa4.53□□□□□ -1.68
RNU6-561P-201ENST00000516222 ZBTB33Q86T24 672 aa4.53□□□□□ -1.68
RNU6-561P-201ENST00000516222 CABLES1Q8TDN4 633 aa4.53□□□□□ -1.68
RNU6-561P-201ENST00000516222 SLC10A4Q96EP9 437 aa4.53□□□□□ -1.68
RNU6-561P-201ENST00000516222 SLC35F4A4IF30 521 aa4.52□□□□□ -1.69
RNU6-561P-201ENST00000516222 PHF20L1A8MW92 1017 aa4.52□□□□□ -1.69
RNU6-561P-201ENST00000516222 KRT76Q01546 638 aa4.52□□□□□ -1.69
RNU6-561P-201ENST00000516222 TUSC1Q2TAM9 212 aa4.52□□□□□ -1.69
RNU6-561P-201ENST00000516222 SH3BP5LQ7L8J4 393 aa4.52□□□□□ -1.69
RNU6-561P-201ENST00000516222 PODNQ7Z5L7 613 aa4.52□□□□□ -1.69
RNU6-561P-201ENST00000516222 PNMA1Q8ND90 353 aa4.52□□□□□ -1.69
RNU6-561P-201ENST00000516222 KCTD15Q96SI1 283 aaPredicted RBP4.52□□□□□ -1.69
RNU6-561P-201ENST00000516222 ARHGAP9Q9BRR9 750 aa4.52□□□□□ -1.69
RNU6-561P-201ENST00000516222 RSPH6AQ9H0K4 717 aa4.52□□□□□ -1.69
RNU6-561P-201ENST00000516222 POLMQ9NP87 494 aaPredicted RBP4.52□□□□□ -1.69
RNU6-561P-201ENST00000516222 SRSF11Q05519 484 aaKnown RBP4.51□□□□□ -1.69
RNU6-561P-201ENST00000516222 PDXDC2PQ6P474 469 aa4.51□□□□□ -1.69
RNU6-561P-201ENST00000516222 BEND7Q8N7W2 519 aaPredicted RBP4.51□□□□□ -1.69
RNU6-561P-201ENST00000516222 AK7Q96M32 723 aa4.51□□□□□ -1.69
RNU6-561P-201ENST00000516222 MSTNO14793 375 aa4.5□□□□□ -1.69
RNU6-561P-201ENST00000516222 LILRB3O75022 631 aa4.5□□□□□ -1.69
RNU6-561P-201ENST00000516222 RELBQ01201 579 aa4.5□□□□□ -1.69
RNU6-561P-201ENST00000516222 PTK2Q05397 1052 aa4.5□□□□□ -1.69
RNU6-561P-201ENST00000516222 CBLBQ13191 982 aa4.5□□□□□ -1.69
RNU6-561P-201ENST00000516222 ERFEQ4G0M1 354 aa4.5□□□□□ -1.69
RNU6-561P-201ENST00000516222 RNFT1Q5M7Z0 435 aa4.5□□□□□ -1.69
RNU6-561P-201ENST00000516222 PARP9Q8IXQ6 854 aa4.5□□□□□ -1.69
RNU6-561P-201ENST00000516222 ZC3H15Q8WU90 426 aaKnown RBP4.5□□□□□ -1.69
RNU6-561P-201ENST00000516222 GMCL1Q96IK5 515 aa4.5□□□□□ -1.69
RNU6-561P-201ENST00000516222 ATP1B4Q9UN42 357 aaPredicted RBP4.5□□□□□ -1.69
RNU6-561P-201ENST00000516222 TRIM66O15016 1216 aa4.49□□□□□ -1.69
RNU6-561P-201ENST00000516222 ARHGEF15O94989 841 aa4.49□□□□□ -1.69
RNU6-561P-201ENST00000516222 ADAMTS2O95450 1211 aa4.49□□□□□ -1.69
RNU6-561P-201ENST00000516222 NBPF20Q3BBV1 942 aa4.49□□□□□ -1.69
RNU6-561P-201ENST00000516222 INSM2Q96T92 566 aaPredicted RBP4.49□□□□□ -1.69
RNU6-561P-201ENST00000516222 ZC3H4Q9UPT8 1303 aaKnown RBP4.48□□□□□ -1.69
RNU6-561P-201ENST00000516222 CTSOP43234 321 aaPredicted RBP4.48□□□□□ -1.69
RNU6-561P-201ENST00000516222 QPCTQ16769 361 aa4.48□□□□□ -1.69
RNU6-561P-201ENST00000516222 MYSM1Q5VVJ2 828 aa4.48□□□□□ -1.69
RNU6-561P-201ENST00000516222 GALNT6Q8NCL4 622 aa4.48□□□□□ -1.69
RNU6-561P-201ENST00000516222 NEDD1Q8NHV4 660 aa4.48□□□□□ -1.69
RNU6-561P-201ENST00000516222 FKBPLQ9UIM3 349 aa4.48□□□□□ -1.69
RNU6-561P-201ENST00000516222 NSFL1CQ9UNZ2 370 aaKnown RBP4.48□□□□□ -1.69
RNU6-561P-201ENST00000516222 H7C1W4 665 aa4.47□□□□□ -1.69
RNU6-561P-201ENST00000516222 LYSMD3Q7Z3D4 306 aa4.47□□□□□ -1.69
RNU6-561P-201ENST00000516222 WHAMMQ8TF30 809 aa4.47□□□□□ -1.69
RNU6-561P-201ENST00000516222 AGBL1Q96MI9 1066 aa4.47□□□□□ -1.69
RNU6-561P-201ENST00000516222 TRERF1Q96PN7 1200 aa4.47□□□□□ -1.69
RNU6-561P-201ENST00000516222 ZNF395Q9H8N7 513 aaPredicted RBP4.47□□□□□ -1.69
RNU6-561P-201ENST00000516222 LIMD1Q9UGP4 676 aa4.47□□□□□ -1.69
RNU6-561P-201ENST00000516222 GPSM3Q9Y4H4 160 aa4.47□□□□□ -1.69
RNU6-561P-201ENST00000516222 CELA2BP08218 269 aaPredicted RBP4.46□□□□□ -1.7
RNU6-561P-201ENST00000516222 CLK2P49760 499 aaKnown RBP4.46□□□□□ -1.7
RNU6-561P-201ENST00000516222 RTL5Q5HYW3 569 aaPredicted RBP4.46□□□□□ -1.7
RNU6-561P-201ENST00000516222 LYPD4Q6UWN0 246 aa4.46□□□□□ -1.7
RNU6-561P-201ENST00000516222 RNF217Q8TC41 542 aa4.46□□□□□ -1.7
RNU6-561P-201ENST00000516222 INTS6LQ5JSJ4 861 aaKnown RBP4.45□□□□□ -1.7
RNU6-561P-201ENST00000516222 DZIP3Q86Y13 1208 aaKnown RBP4.45□□□□□ -1.7
RNU6-561P-201ENST00000516222 MBIPQ9NS73 344 aa4.45□□□□□ -1.7
RNU6-561P-201ENST00000516222 ADH1AP07327 375 aa4.44□□□□□ -1.7
RNU6-561P-201ENST00000516222 BCRP11274 1271 aa4.44□□□□□ -1.7
RNU6-561P-201ENST00000516222 PTGIRP43119 386 aa4.44□□□□□ -1.7
RNU6-561P-201ENST00000516222 RAB15P59190 212 aa4.44□□□□□ -1.7
RNU6-561P-201ENST00000516222 CTDSPL2Q05D32 466 aa4.44□□□□□ -1.7
RNU6-561P-201ENST00000516222 PDE4DQ08499 809 aa4.44□□□□□ -1.7
RNU6-561P-201ENST00000516222 RIPOR1Q6ZS17 1223 aa4.44□□□□□ -1.7
RNU6-561P-201ENST00000516222 CCDC125Q86Z20 511 aa4.44□□□□□ -1.7
RNU6-561P-201ENST00000516222 ESF1Q9H501 851 aaKnown RBP4.44□□□□□ -1.7
RNU6-561P-201ENST00000516222 LRRC4BQ9NT99 713 aa4.44□□□□□ -1.7
RNU6-561P-201ENST00000516222 POLR3EQ9NVU0 708 aa4.44□□□□□ -1.7
RNU6-561P-201ENST00000516222 ADAM23O75077 832 aa4.43□□□□□ -1.7
RNU6-561P-201ENST00000516222 PLA2G4EQ3MJ16 856 aa4.43□□□□□ -1.7
RNU6-561P-201ENST00000516222 PPP2R2DQ66LE6 453 aa4.43□□□□□ -1.7
RNU6-561P-201ENST00000516222 PRICKLE2Q7Z3G6 844 aa4.43□□□□□ -1.7
RNU6-561P-201ENST00000516222 TRIM22Q8IYM9 498 aa4.43□□□□□ -1.7
RNU6-561P-201ENST00000516222 ADAM32Q8TC27 787 aa4.43□□□□□ -1.7
RNU6-561P-201ENST00000516222 DCAF5Q96JK2 942 aa4.43□□□□□ -1.7
RNU6-561P-201ENST00000516222 CNTNAP5Q8WYK1 1306 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms