RNA–Protein interactions for RNA: ENST00000515943.1

RNU4-29P-201, Transcript of RNA, U4 small nuclear 29, pseudogene, humanhuman

BASIC

Gene RNU4-29P, Length 174 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-29P-201ENST00000515943 ATP13A2Q9NQ11 1180 aa6.87□□□□□ -1.31
RNU4-29P-201ENST00000515943 NBPF20Q3BBV1 942 aa6.86□□□□□ -1.31
RNU4-29P-201ENST00000515943 INTS6LQ5JSJ4 861 aaKnown RBP6.86□□□□□ -1.31
RNU4-29P-201ENST00000515943 DZIP3Q86Y13 1208 aaKnown RBP6.86□□□□□ -1.31
RNU4-29P-201ENST00000515943 ZIC2O95409 532 aaPredicted RBP6.85□□□□□ -1.31
RNU4-29P-201ENST00000515943 IRF5Q13568 498 aa6.85□□□□□ -1.31
RNU4-29P-201ENST00000515943 CCDC116Q8IYX3 515 aa6.85□□□□□ -1.31
RNU4-29P-201ENST00000515943 ITPKCQ96DU7 683 aa6.85□□□□□ -1.31
RNU4-29P-201ENST00000515943 ZFAND3Q9H8U3 227 aa6.85□□□□□ -1.31
RNU4-29P-201ENST00000515943 PRM3Q9NNZ6 103 aa6.85□□□□□ -1.31
RNU4-29P-201ENST00000515943 ESPNB1AK53 854 aa6.84□□□□□ -1.31
RNU4-29P-201ENST00000515943 POTECB2RU33 542 aa6.84□□□□□ -1.31
RNU4-29P-201ENST00000515943 BMP1P13497 986 aa6.84□□□□□ -1.31
RNU4-29P-201ENST00000515943 TRIM46Q7Z4K8 759 aa6.84□□□□□ -1.31
RNU4-29P-201ENST00000515943 GDPD2Q9HCC8 539 aa6.84□□□□□ -1.31
RNU4-29P-201ENST00000515943 GMPR2Q9P2T1 348 aaKnown RBP6.84□□□□□ -1.31
RNU4-29P-201ENST00000515943 PCDHB9Q9Y5E1 797 aa6.84□□□□□ -1.31
RNU4-29P-201ENST00000515943 EMILIN1Q9Y6C2 1016 aa6.84□□□□□ -1.31
RNU4-29P-201ENST00000515943 PPP1R26Q5T8A7 1209 aaPredicted RBP6.83□□□□□ -1.32
RNU4-29P-201ENST00000515943 ZNF787Q6DD87 383 aa6.83□□□□□ -1.32
RNU4-29P-201ENST00000515943 DHX9Q08211 1270 aaKnown RBP6.82□□□□□ -1.32
RNU4-29P-201ENST00000515943 FLIIQ13045 1269 aa6.82□□□□□ -1.32
RNU4-29P-201ENST00000515943 MEIOBQ8N635 442 aa6.82□□□□□ -1.32
RNU4-29P-201ENST00000515943 COG6Q9Y2V7 657 aa6.82□□□□□ -1.32
RNU4-29P-201ENST00000515943 ZNF330Q9Y3S2 320 aaPredicted RBP6.82□□□□□ -1.32
RNU4-29P-201ENST00000515943 ABL2P42684 1182 aa6.81□□□□□ -1.32
RNU4-29P-201ENST00000515943 MRPL14Q6P1L8 145 aaKnown RBP6.81□□□□□ -1.32
RNU4-29P-201ENST00000515943 SEPT12Q8IYM1 358 aa6.81□□□□□ -1.32
RNU4-29P-201ENST00000515943 ZNF592Q92610 1267 aa6.81□□□□□ -1.32
RNU4-29P-201ENST00000515943 TRIM47Q96LD4 638 aa6.81□□□□□ -1.32
RNU4-29P-201ENST00000515943 PGPEP1Q9NXJ5 209 aa6.81□□□□□ -1.32
RNU4-29P-201ENST00000515943 GIGYF1O75420 1035 aaPredicted RBP6.8□□□□□ -1.32
RNU4-29P-201ENST00000515943 MCCD1P59942 119 aaPredicted RBP6.8□□□□□ -1.32
RNU4-29P-201ENST00000515943 POM121Q96HA1 1249 aa6.8□□□□□ -1.32
RNU4-29P-201ENST00000515943 SENP2Q9HC62 589 aa6.8□□□□□ -1.32
RNU4-29P-201ENST00000515943 ERVH48-1M5A8F1 160 aa6.79□□□□□ -1.32
RNU4-29P-201ENST00000515943 RAB15P59190 212 aa6.79□□□□□ -1.32
RNU4-29P-201ENST00000515943 C11orf95C9JLR9 678 aaPredicted RBP6.78□□□□□ -1.32
RNU4-29P-201ENST00000515943 VAC14Q08AM6 782 aa6.78□□□□□ -1.32
RNU4-29P-201ENST00000515943 Q6ZVU0 165 aa6.78□□□□□ -1.32
RNU4-29P-201ENST00000515943 ZNF784Q8NCA9 323 aaPredicted RBP6.78□□□□□ -1.32
RNU4-29P-201ENST00000515943 KIFC2Q96AC6 838 aa6.78□□□□□ -1.32
RNU4-29P-201ENST00000515943 TMPRSS4Q9NRS4 437 aa6.78□□□□□ -1.32
RNU4-29P-201ENST00000515943 SNRPBP14678 240 aaKnown RBP6.77□□□□□ -1.33
RNU4-29P-201ENST00000515943 UBTFP17480 764 aaKnown RBP6.77□□□□□ -1.33
RNU4-29P-201ENST00000515943 EIF4G2P78344 907 aaKnown RBP eCLIP6.77□□□□□ -1.33
RNU4-29P-201ENST00000515943 CBLBQ13191 982 aa6.77□□□□□ -1.33
RNU4-29P-201ENST00000515943 WASHC4Q2M389 1173 aa6.77□□□□□ -1.33
RNU4-29P-201ENST00000515943 LINC00528Q8N1L1 170 aa6.77□□□□□ -1.33
RNU4-29P-201ENST00000515943 ZFP42Q96MM3 310 aa6.77□□□□□ -1.33
RNU4-29P-201ENST00000515943 PURBQ96QR8 312 aaKnown RBP6.77□□□□□ -1.33
RNU4-29P-201ENST00000515943 LILRA1O75019 489 aa6.76□□□□□ -1.33
RNU4-29P-201ENST00000515943 SCARF1Q14162 830 aa6.76□□□□□ -1.33
RNU4-29P-201ENST00000515943 RNF20Q5VTR2 975 aa6.76□□□□□ -1.33
RNU4-29P-201ENST00000515943 CCDC125Q86Z20 511 aa6.76□□□□□ -1.33
RNU4-29P-201ENST00000515943 RAD21O60216 631 aa6.75□□□□□ -1.33
RNU4-29P-201ENST00000515943 C6orf118Q5T5N4 469 aa6.75□□□□□ -1.33
RNU4-29P-201ENST00000515943 TSEN34Q9BSV6 310 aaKnown RBP6.75□□□□□ -1.33
RNU4-29P-201ENST00000515943 CEP126Q9P2H0 1117 aa6.75□□□□□ -1.33
RNU4-29P-201ENST00000515943 UPP2O95045 317 aa6.74□□□□□ -1.33
RNU4-29P-201ENST00000515943 ADH1AP07327 375 aa6.74□□□□□ -1.33
RNU4-29P-201ENST00000515943 BMP2P12643 396 aa6.74□□□□□ -1.33
RNU4-29P-201ENST00000515943 CYLDQ9NQC7 956 aa6.74□□□□□ -1.33
RNU4-29P-201ENST00000515943 ADD1P35611 737 aaKnown RBP6.73□□□□□ -1.33
RNU4-29P-201ENST00000515943 SOX11P35716 441 aa6.73□□□□□ -1.33
RNU4-29P-201ENST00000515943 ERVK-9P63128 1117 aa6.73□□□□□ -1.33
RNU4-29P-201ENST00000515943 WWC1Q8IX03 1113 aa6.73□□□□□ -1.33
RNU4-29P-201ENST00000515943 AGBL1Q96MI9 1066 aa6.73□□□□□ -1.33
RNU4-29P-201ENST00000515943 PCDHB11Q9Y5F2 797 aa6.73□□□□□ -1.33
RNU4-29P-201ENST00000515943 SPINT1O43278 529 aa6.72□□□□□ -1.33
RNU4-29P-201ENST00000515943 PHTF2Q8N3S3 785 aa6.72□□□□□ -1.33
RNU4-29P-201ENST00000515943 KDF1Q8NAX2 398 aaPredicted RBP6.72□□□□□ -1.33
RNU4-29P-201ENST00000515943 TRIM52Q96A61 297 aa6.72□□□□□ -1.33
RNU4-29P-201ENST00000515943 ZNF775Q96BV0 537 aaPredicted RBP6.72□□□□□ -1.33
RNU4-29P-201ENST00000515943 CCDC85AQ96PX6 553 aaPredicted RBP6.72□□□□□ -1.33
RNU4-29P-201ENST00000515943 SCTRP47872 440 aa6.71□□□□□ -1.34
RNU4-29P-201ENST00000515943 RELBQ01201 579 aa6.71□□□□□ -1.34
RNU4-29P-201ENST00000515943 CC2D2BQ6DHV5 1058 aa6.71□□□□□ -1.34
RNU4-29P-201ENST00000515943 CLUAP1Q96AJ1 413 aa6.71□□□□□ -1.34
RNU4-29P-201ENST00000515943 SOS2Q07890 1332 aaPredicted RBP6.71□□□□□ -1.34
RNU4-29P-201ENST00000515943 SEMA3FQ13275 785 aa6.7□□□□□ -1.34
RNU4-29P-201ENST00000515943 SLFNL1Q499Z3 407 aa6.7□□□□□ -1.34
RNU4-29P-201ENST00000515943 RNF135Q8IUD6 432 aa6.7□□□□□ -1.34
RNU4-29P-201ENST00000515943 CHIC2Q9UKJ5 165 aa6.7□□□□□ -1.34
RNU4-29P-201ENST00000515943 SOBPA7XYQ1 873 aa6.69□□□□□ -1.34
RNU4-29P-201ENST00000515943 POM121CA8CG34 1229 aa6.69□□□□□ -1.34
RNU4-29P-201ENST00000515943 PTGIRP43119 386 aa6.69□□□□□ -1.34
RNU4-29P-201ENST00000515943 PROSER2Q86WR7 435 aaPredicted RBP6.69□□□□□ -1.34
RNU4-29P-201ENST00000515943 FNBP4Q8N3X1 1017 aaPredicted RBP6.69□□□□□ -1.34
RNU4-29P-201ENST00000515943 CDCA7Q9BWT1 371 aaPredicted RBP6.69□□□□□ -1.34
RNU4-29P-201ENST00000515943 ALG2Q9H553 416 aa6.69□□□□□ -1.34
RNU4-29P-201ENST00000515943 DNMT3LQ9UJW3 386 aa6.69□□□□□ -1.34
RNU4-29P-201ENST00000515943 TTLL8A6PVC2 850 aa6.68□□□□□ -1.34
RNU4-29P-201ENST00000515943 TRAK2O60296 914 aa6.68□□□□□ -1.34
RNU4-29P-201ENST00000515943 ADAMTS19Q8TE59 1207 aa6.68□□□□□ -1.34
RNU4-29P-201ENST00000515943 INSM2Q96T92 566 aaPredicted RBP6.68□□□□□ -1.34
RNU4-29P-201ENST00000515943 OSBPL3Q9H4L5 887 aa6.68□□□□□ -1.34
RNU4-29P-201ENST00000515943 ZNF395Q9H8N7 513 aaPredicted RBP6.68□□□□□ -1.34
RNU4-29P-201ENST00000515943 DOLKQ9UPQ8 538 aa6.68□□□□□ -1.34
RNU4-29P-201ENST00000515943 A6NJR5 290 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms