RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.97■■□□□ 1.59
SFXN1-212ENST00000515791 TIMELESSQ9UNS1 1208 aa24.96■■□□□ 1.59
SFXN1-212ENST00000515791 DISP2A7MBM2 1401 aa24.95■■□□□ 1.59
SFXN1-212ENST00000515791 USP47Q96K76 1375 aa24.95■■□□□ 1.59
SFXN1-212ENST00000515791 WDR17Q8IZU2 1322 aa24.95■■□□□ 1.58
SFXN1-212ENST00000515791 HDGFL2Q7Z4V5 671 aaPredicted RBP24.95■■□□□ 1.58
SFXN1-212ENST00000515791 ABCC6O95255 1503 aa24.95■■□□□ 1.58
SFXN1-212ENST00000515791 SOX12O15370 315 aa24.94■■□□□ 1.58
SFXN1-212ENST00000515791 SLC24A1O60721 1099 aa24.93■■□□□ 1.58
SFXN1-212ENST00000515791 FAM196AQ6ZSG2 479 aa24.93■■□□□ 1.58
SFXN1-212ENST00000515791 TERF2IPQ9NYB0 399 aa24.93■■□□□ 1.58
SFXN1-212ENST00000515791 OVOS2A0A0J9YW53 1432 aa24.93■■□□□ 1.58
SFXN1-212ENST00000515791 OVOS2Q6IE36 1432 aa24.93■■□□□ 1.58
SFXN1-212ENST00000515791 WNK3Q9BYP7 1800 aa24.93■■□□□ 1.58
SFXN1-212ENST00000515791 NINLQ9Y2I6 1382 aa24.93■■□□□ 1.58
SFXN1-212ENST00000515791 LRRC37A3O60309 1634 aa24.91■■□□□ 1.58
SFXN1-212ENST00000515791 BAG6P46379 1132 aa24.91■■□□□ 1.58
SFXN1-212ENST00000515791 PCGF6Q9BYE7 350 aa24.91■■□□□ 1.58
SFXN1-212ENST00000515791 PEAK1Q9H792 1746 aa24.91■■□□□ 1.58
SFXN1-212ENST00000515791 EN1Q05925 392 aaPredicted RBP24.9■■□□□ 1.58
SFXN1-212ENST00000515791 TOM1L2Q6ZVM7 507 aa24.9■■□□□ 1.58
SFXN1-212ENST00000515791 PDE3BQ13370 1112 aa24.89■■□□□ 1.58
SFXN1-212ENST00000515791 LTN1O94822 1766 aa24.88■■□□□ 1.57
SFXN1-212ENST00000515791 TRIM37O94972 964 aa24.88■■□□□ 1.57
SFXN1-212ENST00000515791 CARD10Q9BWT7 1032 aa24.87■■□□□ 1.57
SFXN1-212ENST00000515791 ANKRD36BQ8N2N9 1353 aa24.85■■□□□ 1.57
SFXN1-212ENST00000515791 TMF1P82094 1093 aa24.85■■□□□ 1.57
SFXN1-212ENST00000515791 CAMKK2Q96RR4 588 aa24.85■■□□□ 1.57
SFXN1-212ENST00000515791 EZH2Q15910 746 aaKnown RBP24.83■■□□□ 1.57
SFXN1-212ENST00000515791 ERBB3P21860 1342 aa24.83■■□□□ 1.56
SFXN1-212ENST00000515791 SBF2Q86WG5 1849 aa24.82■■□□□ 1.56
SFXN1-212ENST00000515791 DDB1Q16531 1140 aa24.81■■□□□ 1.56
SFXN1-212ENST00000515791 OVOS2A0A0G2JMS6 1433 aa24.8■■□□□ 1.56
SFXN1-212ENST00000515791 CDCA7Q9BWT1 371 aaPredicted RBP24.8■■□□□ 1.56
SFXN1-212ENST00000515791 CCDC7Q96M83 1385 aa24.8■■□□□ 1.56
SFXN1-212ENST00000515791 MYOM1P52179 1685 aa24.79■■□□□ 1.56
SFXN1-212ENST00000515791 RREB1Q92766 1687 aa24.79■■□□□ 1.56
SFXN1-212ENST00000515791 APBA3O96018 575 aa24.79■■□□□ 1.56
SFXN1-212ENST00000515791 CSB-PGBD3P0DP91 1061 aa24.79■■□□□ 1.56
SFXN1-212ENST00000515791 MARCH10Q8NA82 808 aaPredicted RBP24.79■■□□□ 1.56
SFXN1-212ENST00000515791 BCL9O00512 1426 aa24.78■■□□□ 1.56
SFXN1-212ENST00000515791 PARD3Q8TEW0 1356 aa24.77■■□□□ 1.56
SFXN1-212ENST00000515791 C11orf95C9JLR9 678 aaPredicted RBP24.76■■□□□ 1.55
SFXN1-212ENST00000515791 FYB1O15117 783 aa24.76■■□□□ 1.55
SFXN1-212ENST00000515791 FBLN1P23142 703 aa24.76■■□□□ 1.55
SFXN1-212ENST00000515791 ANKRD24Q8TF21 1146 aa24.75■■□□□ 1.55
SFXN1-212ENST00000515791 IP6K1Q92551 441 aa24.75■■□□□ 1.55
SFXN1-212ENST00000515791 PSDA5PKW4 1024 aaPredicted RBP24.74■■□□□ 1.55
SFXN1-212ENST00000515791 PTF1AQ7RTS3 328 aa24.74■■□□□ 1.55
SFXN1-212ENST00000515791 COG3Q96JB2 828 aa24.74■■□□□ 1.55
SFXN1-212ENST00000515791 NUP188Q5SRE5 1749 aa24.74■■□□□ 1.55
SFXN1-212ENST00000515791 MAP3K19Q56UN5 1328 aa24.73■■□□□ 1.55
SFXN1-212ENST00000515791 CDCA8Q53HL2 280 aa24.73■■□□□ 1.55
SFXN1-212ENST00000515791 TNS2Q63HR2 1409 aa24.72■■□□□ 1.55
SFXN1-212ENST00000515791 CARD14Q9BXL6 1004 aa24.72■■□□□ 1.55
SFXN1-212ENST00000515791 NLRP2Q9NX02 1062 aa24.71■■□□□ 1.55
SFXN1-212ENST00000515791 LRP5O75197 1615 aa24.71■■□□□ 1.55
SFXN1-212ENST00000515791 RGPD3A6NKT7 1758 aaPredicted RBP24.7■■□□□ 1.55
SFXN1-212ENST00000515791 RGPD4Q7Z3J3 1758 aa24.7■■□□□ 1.55
SFXN1-212ENST00000515791 EXOC5O00471 708 aa24.7■■□□□ 1.54
SFXN1-212ENST00000515791 GGNBP2Q9H3C7 697 aa24.7■■□□□ 1.54
SFXN1-212ENST00000515791 HOXC9P31274 260 aa24.69■■□□□ 1.54
SFXN1-212ENST00000515791 R3HDM1Q15032 1099 aaKnown RBP24.69■■□□□ 1.54
SFXN1-212ENST00000515791 BCL11BQ9C0K0 894 aaPredicted RBP24.69■■□□□ 1.54
SFXN1-212ENST00000515791 FAM208AQ9UK61 1670 aaKnown RBP24.69■■□□□ 1.54
SFXN1-212ENST00000515791 KIF20BQ96Q89 1820 aa24.68■■□□□ 1.54
SFXN1-212ENST00000515791 PLSCR1O15162 318 aa24.68■■□□□ 1.54
SFXN1-212ENST00000515791 CCER1Q8TC90 406 aaPredicted RBP24.68■■□□□ 1.54
SFXN1-212ENST00000515791 IL2RBP14784 551 aa24.67■■□□□ 1.54
SFXN1-212ENST00000515791 RGPD2P0DJD1 1756 aa24.65■■□□□ 1.54
SFXN1-212ENST00000515791 RTL1A6NKG5 1358 aa24.64■■□□□ 1.53
SFXN1-212ENST00000515791 RRS1Q15050 365 aaKnown RBP24.63■■□□□ 1.53
SFXN1-212ENST00000515791 PROM2Q8N271 834 aa24.63■■□□□ 1.53
SFXN1-212ENST00000515791 NSD3Q9BZ95 1437 aa24.62■■□□□ 1.53
SFXN1-212ENST00000515791 LTV1Q96GA3 475 aaPredicted RBP24.62■■□□□ 1.53
SFXN1-212ENST00000515791 NHSQ6T4R5 1651 aa24.62■■□□□ 1.53
SFXN1-212ENST00000515791 HSPA5P11021 654 aaKnown RBP24.61■■□□□ 1.53
SFXN1-212ENST00000515791 AMPHP49418 695 aa24.61■■□□□ 1.53
SFXN1-212ENST00000515791 KCNQ2O43526 872 aa24.6■■□□□ 1.53
SFXN1-212ENST00000515791 EIF4G2P78344 907 aaKnown RBP eCLIP24.59■■□□□ 1.53
SFXN1-212ENST00000515791 SHANK3Q9BYB0 1731 aa24.57■■□□□ 1.52
SFXN1-212ENST00000515791 NBPF6Q5VWK0 638 aa24.56■■□□□ 1.52
SFXN1-212ENST00000515791 NBPF4Q96M43 638 aa24.56■■□□□ 1.52
SFXN1-212ENST00000515791 MEGF6O75095 1541 aa24.56■■□□□ 1.52
SFXN1-212ENST00000515791 INSRP06213 1382 aa24.55■■□□□ 1.52
SFXN1-212ENST00000515791 KIF24Q5T7B8 1368 aa24.55■■□□□ 1.52
SFXN1-212ENST00000515791 HSP90AB2PQ58FF8 381 aa24.55■■□□□ 1.52
SFXN1-212ENST00000515791 NBPF14Q5TI25 921 aa24.55■■□□□ 1.52
SFXN1-212ENST00000515791 ANO8Q9HCE9 1232 aaPredicted RBP24.55■■□□□ 1.52
SFXN1-212ENST00000515791 ACSBG1Q96GR2 724 aa24.54■■□□□ 1.52
SFXN1-212ENST00000515791 ANKRD26Q9UPS8 1709 aa24.54■■□□□ 1.52
SFXN1-212ENST00000515791 FLT4P35916 1363 aa24.53■■□□□ 1.52
SFXN1-212ENST00000515791 BTAF1O14981 1849 aa24.51■■□□□ 1.51
SFXN1-212ENST00000515791 TXNRD1Q16881 649 aa24.51■■□□□ 1.51
SFXN1-212ENST00000515791 EMILIN1Q9Y6C2 1016 aa24.51■■□□□ 1.51
SFXN1-212ENST00000515791 USHBP1Q8N6Y0 703 aa24.49■■□□□ 1.51
SFXN1-212ENST00000515791 DDX54Q8TDD1 881 aaKnown RBP24.49■■□□□ 1.51
SFXN1-212ENST00000515791 CGNL1Q0VF96 1302 aa24.49■■□□□ 1.51
SFXN1-212ENST00000515791 CASZ1Q86V15 1759 aa24.48■■□□□ 1.51
SFXN1-212ENST00000515791 MAP2P11137 1827 aaKnown RBP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms