RNA–Protein interactions for RNA: ENST00000515663.5

CAST-244, Transcript of calpastatin, humanhuman

TSL 2 BASIC

Gene CAST, Length 1,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-244ENST00000515663 RSPH6AQ9H0K4 717 aa11.69□□□□□ -0.54
CAST-244ENST00000515663 ALS2Q96Q42 1657 aa11.69□□□□□ -0.54
CAST-244ENST00000515663 RTL1A6NKG5 1358 aa11.68□□□□□ -0.54
CAST-244ENST00000515663 SOS2Q07890 1332 aaPredicted RBP11.68□□□□□ -0.54
CAST-244ENST00000515663 PPM1GO15355 546 aaPredicted RBP11.68□□□□□ -0.54
CAST-244ENST00000515663 EIF4A2Q14240 407 aaKnown RBP11.68□□□□□ -0.54
CAST-244ENST00000515663 TRMT2AQ8IZ69 625 aaKnown RBP11.68□□□□□ -0.54
CAST-244ENST00000515663 TCP11L2Q8N4U5 519 aa11.68□□□□□ -0.54
CAST-244ENST00000515663 FBXO41Q8TF61 875 aa11.68□□□□□ -0.54
CAST-244ENST00000515663 PHRF1Q9P1Y6 1649 aaKnown RBP11.67□□□□□ -0.54
CAST-244ENST00000515663 SPATA31A3Q5VYP0 1347 aa11.67□□□□□ -0.54
CAST-244ENST00000515663 U2SURPO15042 1029 aaKnown RBP11.67□□□□□ -0.54
CAST-244ENST00000515663 HSP90AB2PQ58FF8 381 aa11.67□□□□□ -0.54
CAST-244ENST00000515663 GCP02774 474 aa11.66□□□□□ -0.54
CAST-244ENST00000515663 NUTM2GQ5VZR2 741 aa11.66□□□□□ -0.54
CAST-244ENST00000515663 ARHGEF25Q86VW2 580 aa11.66□□□□□ -0.54
CAST-244ENST00000515663 TNS3Q68CZ2 1445 aa11.66□□□□□ -0.54
CAST-244ENST00000515663 RGPD1P0DJD0 1748 aa11.65□□□□□ -0.54
CAST-244ENST00000515663 HOXC9P31274 260 aa11.65□□□□□ -0.54
CAST-244ENST00000515663 XPCQ01831 940 aaPredicted RBP11.65□□□□□ -0.54
CAST-244ENST00000515663 WWC1Q8IX03 1113 aa11.65□□□□□ -0.54
CAST-244ENST00000515663 IP6K1Q92551 441 aa11.65□□□□□ -0.54
CAST-244ENST00000515663 AMPHP49418 695 aa11.64□□□□□ -0.55
CAST-244ENST00000515663 GOLGA2Q08379 1002 aa11.64□□□□□ -0.55
CAST-244ENST00000515663 SLFN5Q08AF3 891 aa11.64□□□□□ -0.55
CAST-244ENST00000515663 WDR63Q8IWG1 891 aa11.64□□□□□ -0.55
CAST-244ENST00000515663 CDCA7LQ96GN5 454 aa11.64□□□□□ -0.55
CAST-244ENST00000515663 SALL2Q9Y467 1007 aaPredicted RBP11.64□□□□□ -0.55
CAST-244ENST00000515663 ARHGEF10O15013 1369 aa11.64□□□□□ -0.55
CAST-244ENST00000515663 KDRP35968 1356 aa11.64□□□□□ -0.55
CAST-244ENST00000515663 MED1Q15648 1581 aaPredicted RBP11.64□□□□□ -0.55
CAST-244ENST00000515663 RNF123Q5XPI4 1314 aa11.64□□□□□ -0.55
CAST-244ENST00000515663 SENP3-EIF4A1A0A087X0R7 540 aa11.63□□□□□ -0.55
CAST-244ENST00000515663 TMPOP42166 694 aaKnown RBP11.63□□□□□ -0.55
CAST-244ENST00000515663 DDX17Q92841 729 aaKnown RBP11.63□□□□□ -0.55
CAST-244ENST00000515663 GTF3C3Q9Y5Q9 886 aa11.63□□□□□ -0.55
CAST-244ENST00000515663 IGSF1Q8N6C5 1336 aa11.63□□□□□ -0.55
CAST-244ENST00000515663 PRKAR2BP31323 418 aa11.63□□□□□ -0.55
CAST-244ENST00000515663 DSG3P32926 999 aa11.63□□□□□ -0.55
CAST-244ENST00000515663 DUSP27Q5VZP5 1158 aa11.63□□□□□ -0.55
CAST-244ENST00000515663 NHSL1Q5SYE7 1610 aa11.62□□□□□ -0.55
CAST-244ENST00000515663 SOX12O15370 315 aa11.62□□□□□ -0.55
CAST-244ENST00000515663 TRIM35Q9UPQ4 493 aa11.62□□□□□ -0.55
CAST-244ENST00000515663 MAPK8IP3Q9UPT6 1336 aa11.61□□□□□ -0.55
CAST-244ENST00000515663 E9PSI1 815 aa11.61□□□□□ -0.55
CAST-244ENST00000515663 PHACTR3Q96KR7 559 aa11.61□□□□□ -0.55
CAST-244ENST00000515663 EYA1Q99502 592 aa11.61□□□□□ -0.55
CAST-244ENST00000515663 NCAPD2Q15021 1401 aa11.6□□□□□ -0.55
CAST-244ENST00000515663 HMOX1P09601 288 aa11.6□□□□□ -0.55
CAST-244ENST00000515663 NFE2L2Q16236 605 aa11.6□□□□□ -0.55
CAST-244ENST00000515663 SPINK5Q9NQ38 1064 aaPredicted RBP11.6□□□□□ -0.55
CAST-244ENST00000515663 ABCC6O95255 1503 aa11.6□□□□□ -0.55
CAST-244ENST00000515663 CPDO75976 1380 aa11.6□□□□□ -0.55
CAST-244ENST00000515663 CRYBG1Q9Y4K1 1723 aa11.6□□□□□ -0.55
CAST-244ENST00000515663 IL16Q14005 1332 aa11.6□□□□□ -0.55
CAST-244ENST00000515663 SULT6B1Q6IMI4 303 aa11.59□□□□□ -0.55
CAST-244ENST00000515663 RRP7AQ9Y3A4 280 aaKnown RBP11.59□□□□□ -0.55
CAST-244ENST00000515663 SUPT16HQ9Y5B9 1047 aaKnown RBP11.59□□□□□ -0.55
CAST-244ENST00000515663 CAPN15O75808 1086 aa11.58□□□□□ -0.56
CAST-244ENST00000515663 NEFMP07197 916 aa11.58□□□□□ -0.56
CAST-244ENST00000515663 RIPK4P57078 832 aa11.58□□□□□ -0.56
CAST-244ENST00000515663 LMOD2Q6P5Q4 547 aa11.58□□□□□ -0.56
CAST-244ENST00000515663 AEBP1Q8IUX7 1158 aa11.58□□□□□ -0.56
CAST-244ENST00000515663 LTN1O94822 1766 aa11.58□□□□□ -0.56
CAST-244ENST00000515663 AHDC1Q5TGY3 1603 aaPredicted RBP11.58□□□□□ -0.56
CAST-244ENST00000515663 NEUROD2Q15784 382 aa11.57□□□□□ -0.56
CAST-244ENST00000515663 AXIN2Q9Y2T1 843 aa11.57□□□□□ -0.56
CAST-244ENST00000515663 RCAN3Q9UKA8 241 aa11.56□□□□□ -0.56
CAST-244ENST00000515663 COL18A1P39060 1754 aa11.56□□□□□ -0.56
CAST-244ENST00000515663 LMOD3Q0VAK6 560 aa11.55□□□□□ -0.56
CAST-244ENST00000515663 NBPF6Q5VWK0 638 aa11.55□□□□□ -0.56
CAST-244ENST00000515663 ERICH6BQ5W0A0 696 aa11.55□□□□□ -0.56
CAST-244ENST00000515663 LRRC59Q96AG4 307 aaKnown RBP11.55□□□□□ -0.56
CAST-244ENST00000515663 NBPF4Q96M43 638 aa11.55□□□□□ -0.56
CAST-244ENST00000515663 CAMTA1Q9Y6Y1 1673 aa11.55□□□□□ -0.56
CAST-244ENST00000515663 ERBB3P21860 1342 aa11.55□□□□□ -0.56
CAST-244ENST00000515663 PLEKHG2Q9H7P9 1386 aa11.54□□□□□ -0.56
CAST-244ENST00000515663 ROBO1Q9Y6N7 1651 aa11.54□□□□□ -0.56
CAST-244ENST00000515663 POTEHQ6S545 545 aa11.54□□□□□ -0.56
CAST-244ENST00000515663 CABLES1Q8TDN4 633 aa11.54□□□□□ -0.56
CAST-244ENST00000515663 LMO7Q8WWI1 1683 aa11.53□□□□□ -0.56
CAST-244ENST00000515663 HTATSF1O43719 755 aaKnown RBP11.53□□□□□ -0.56
CAST-244ENST00000515663 ZNF853P0CG23 659 aa11.53□□□□□ -0.56
CAST-244ENST00000515663 ZC3H6P61129 1189 aaKnown RBP11.53□□□□□ -0.56
CAST-244ENST00000515663 CALD1Q05682 793 aaKnown RBP11.53□□□□□ -0.56
CAST-244ENST00000515663 ANKRD24Q8TF21 1146 aa11.53□□□□□ -0.56
CAST-244ENST00000515663 MYH16Q9H6N6 1097 aa11.53□□□□□ -0.56
CAST-244ENST00000515663 TOM1O60784 492 aa11.52□□□□□ -0.56
CAST-244ENST00000515663 CT47B1P0C2W7 299 aaPredicted RBP11.52□□□□□ -0.56
CAST-244ENST00000515663 MTHFSDQ2M296 383 aaKnown RBP11.52□□□□□ -0.56
CAST-244ENST00000515663 KIAA0232Q92628 1395 aa11.52□□□□□ -0.57
CAST-244ENST00000515663 GAS2L2Q8NHY3 880 aa11.51□□□□□ -0.57
CAST-244ENST00000515663 LTV1Q96GA3 475 aaPredicted RBP11.51□□□□□ -0.57
CAST-244ENST00000515663 NEFLP07196 543 aa11.51□□□□□ -0.57
CAST-244ENST00000515663 FKBP8Q14318 412 aa11.51□□□□□ -0.57
CAST-244ENST00000515663 IFT57Q9NWB7 429 aa11.51□□□□□ -0.57
CAST-244ENST00000515663 COL22A1Q8NFW1 1626 aaPredicted RBP11.5□□□□□ -0.57
CAST-244ENST00000515663 ABCA3Q99758 1704 aa11.5□□□□□ -0.57
CAST-244ENST00000515663 RRP1P56182 461 aaKnown RBP11.5□□□□□ -0.57
CAST-244ENST00000515663 GNAI1P63096 354 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms