RNA–Protein interactions for RNA: ENST00000515266.1

MBD4-210, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-210ENST00000515266 DZIP3Q86Y13 1208 aaKnown RBP7.78□□□□□ -1.16
MBD4-210ENST00000515266 KCTD15Q96SI1 283 aaPredicted RBP7.78□□□□□ -1.16
MBD4-210ENST00000515266 KLF16Q9BXK1 252 aaPredicted RBP7.78□□□□□ -1.16
MBD4-210ENST00000515266 PCDHB9Q9Y5E1 797 aa7.78□□□□□ -1.16
MBD4-210ENST00000515266 ESPNB1AK53 854 aa7.77□□□□□ -1.17
MBD4-210ENST00000515266 TIMP2P16035 220 aa7.77□□□□□ -1.17
MBD4-210ENST00000515266 INTS6LQ5JSJ4 861 aaKnown RBP7.77□□□□□ -1.17
MBD4-210ENST00000515266 AXIN1O15169 862 aa7.76□□□□□ -1.17
MBD4-210ENST00000515266 NBPF20Q3BBV1 942 aa7.76□□□□□ -1.17
MBD4-210ENST00000515266 WDR4P57081 412 aaKnown RBP7.75□□□□□ -1.17
MBD4-210ENST00000515266 VAC14Q08AM6 782 aa7.75□□□□□ -1.17
MBD4-210ENST00000515266 CCDC116Q8IYX3 515 aa7.75□□□□□ -1.17
MBD4-210ENST00000515266 DACH1Q9UI36 760 aa7.75□□□□□ -1.17
MBD4-210ENST00000515266 CAPN5O15484 640 aaPredicted RBP7.74□□□□□ -1.17
MBD4-210ENST00000515266 RAD21O60216 631 aa7.74□□□□□ -1.17
MBD4-210ENST00000515266 WASHC4Q2M389 1173 aa7.74□□□□□ -1.17
MBD4-210ENST00000515266 CLUAP1Q96AJ1 413 aa7.74□□□□□ -1.17
MBD4-210ENST00000515266 ITPKCQ96DU7 683 aa7.74□□□□□ -1.17
MBD4-210ENST00000515266 ZFAND3Q9H8U3 227 aa7.74□□□□□ -1.17
MBD4-210ENST00000515266 ZNF330Q9Y3S2 320 aaPredicted RBP7.74□□□□□ -1.17
MBD4-210ENST00000515266 GIGYF1O75420 1035 aaPredicted RBP7.73□□□□□ -1.17
MBD4-210ENST00000515266 MCCD1P59942 119 aaPredicted RBP7.73□□□□□ -1.17
MBD4-210ENST00000515266 PPP1R26Q5T8A7 1209 aaPredicted RBP7.73□□□□□ -1.17
MBD4-210ENST00000515266 ZIC2O95409 532 aaPredicted RBP7.72□□□□□ -1.17
MBD4-210ENST00000515266 ZNF592Q92610 1267 aa7.72□□□□□ -1.17
MBD4-210ENST00000515266 EMILIN1Q9Y6C2 1016 aa7.72□□□□□ -1.17
MBD4-210ENST00000515266 RAB15P59190 212 aa7.71□□□□□ -1.18
MBD4-210ENST00000515266 EIF4G2P78344 907 aaKnown RBP eCLIP7.71□□□□□ -1.18
MBD4-210ENST00000515266 DHX9Q08211 1270 aaKnown RBP7.71□□□□□ -1.18
MBD4-210ENST00000515266 SEPT12Q8IYM1 358 aa7.71□□□□□ -1.18
MBD4-210ENST00000515266 ATP13A2Q9NQ11 1180 aa7.71□□□□□ -1.18
MBD4-210ENST00000515266 ERVH48-1M5A8F1 160 aa7.7□□□□□ -1.18
MBD4-210ENST00000515266 TRIM46Q7Z4K8 759 aa7.7□□□□□ -1.18
MBD4-210ENST00000515266 FNBP4Q8N3X1 1017 aaPredicted RBP7.7□□□□□ -1.18
MBD4-210ENST00000515266 CEP126Q9P2H0 1117 aa7.7□□□□□ -1.18
MBD4-210ENST00000515266 GTF3C3Q9Y5Q9 886 aa7.7□□□□□ -1.18
MBD4-210ENST00000515266 BMP1P13497 986 aa7.69□□□□□ -1.18
MBD4-210ENST00000515266 PROSER2Q86WR7 435 aaPredicted RBP7.69□□□□□ -1.18
MBD4-210ENST00000515266 WWC1Q8IX03 1113 aa7.69□□□□□ -1.18
MBD4-210ENST00000515266 MEIOBQ8N635 442 aa7.69□□□□□ -1.18
MBD4-210ENST00000515266 TMPRSS4Q9NRS4 437 aa7.69□□□□□ -1.18
MBD4-210ENST00000515266 PGPEP1Q9NXJ5 209 aa7.69□□□□□ -1.18
MBD4-210ENST00000515266 A6NJR5 290 aa7.68□□□□□ -1.18
MBD4-210ENST00000515266 POM121CA8CG34 1229 aa7.68□□□□□ -1.18
MBD4-210ENST00000515266 POTECB2RU33 542 aa7.68□□□□□ -1.18
MBD4-210ENST00000515266 SOX11P35716 441 aa7.68□□□□□ -1.18
MBD4-210ENST00000515266 ZNF784Q8NCA9 323 aaPredicted RBP7.68□□□□□ -1.18
MBD4-210ENST00000515266 LILRA1O75019 489 aa7.67□□□□□ -1.18
MBD4-210ENST00000515266 CBLBQ13191 982 aa7.67□□□□□ -1.18
MBD4-210ENST00000515266 RNF20Q5VTR2 975 aa7.67□□□□□ -1.18
MBD4-210ENST00000515266 Q6ZVU0 165 aa7.67□□□□□ -1.18
MBD4-210ENST00000515266 PHTF2Q8N3S3 785 aa7.67□□□□□ -1.18
MBD4-210ENST00000515266 ALG2Q9H553 416 aa7.67□□□□□ -1.18
MBD4-210ENST00000515266 GMPR2Q9P2T1 348 aaKnown RBP7.67□□□□□ -1.18
MBD4-210ENST00000515266 MRPL14Q6P1L8 145 aaKnown RBP7.66□□□□□ -1.18
MBD4-210ENST00000515266 CCDC125Q86Z20 511 aa7.66□□□□□ -1.18
MBD4-210ENST00000515266 ADAMTS19Q8TE59 1207 aa7.66□□□□□ -1.18
MBD4-210ENST00000515266 CCDC85AQ96PX6 553 aaPredicted RBP7.66□□□□□ -1.18
MBD4-210ENST00000515266 ADD1P35611 737 aaKnown RBP7.65□□□□□ -1.18
MBD4-210ENST00000515266 SEMA3FQ13275 785 aa7.65□□□□□ -1.18
MBD4-210ENST00000515266 CYLDQ9NQC7 956 aa7.65□□□□□ -1.18
MBD4-210ENST00000515266 LINC00528Q8N1L1 170 aa7.64□□□□□ -1.19
MBD4-210ENST00000515266 CHIC2Q9UKJ5 165 aa7.64□□□□□ -1.19
MBD4-210ENST00000515266 PCDHB11Q9Y5F2 797 aa7.64□□□□□ -1.19
MBD4-210ENST00000515266 ERVK-9P63128 1117 aa7.63□□□□□ -1.19
MBD4-210ENST00000515266 ZNF787Q6DD87 383 aa7.63□□□□□ -1.19
MBD4-210ENST00000515266 RNF135Q8IUD6 432 aa7.63□□□□□ -1.19
MBD4-210ENST00000515266 TRIM47Q96LD4 638 aa7.63□□□□□ -1.19
MBD4-210ENST00000515266 ZFP42Q96MM3 310 aa7.63□□□□□ -1.19
MBD4-210ENST00000515266 PIK3CDO00329 1044 aa7.62□□□□□ -1.19
MBD4-210ENST00000515266 ADH1AP07327 375 aa7.62□□□□□ -1.19
MBD4-210ENST00000515266 SCTRP47872 440 aa7.62□□□□□ -1.19
MBD4-210ENST00000515266 TSGA10IPQ3SY00 556 aa7.62□□□□□ -1.19
MBD4-210ENST00000515266 SLFNL1Q499Z3 407 aa7.62□□□□□ -1.19
MBD4-210ENST00000515266 KDF1Q8NAX2 398 aaPredicted RBP7.62□□□□□ -1.19
MBD4-210ENST00000515266 AGBL1Q96MI9 1066 aa7.62□□□□□ -1.19
MBD4-210ENST00000515266 PURBQ96QR8 312 aaKnown RBP7.62□□□□□ -1.19
MBD4-210ENST00000515266 CDCA7Q9BWT1 371 aaPredicted RBP7.62□□□□□ -1.19
MBD4-210ENST00000515266 SENP2Q9HC62 589 aa7.62□□□□□ -1.19
MBD4-210ENST00000515266 C11orf95C9JLR9 678 aaPredicted RBP7.61□□□□□ -1.19
MBD4-210ENST00000515266 SNRPBP14678 240 aaKnown RBP7.61□□□□□ -1.19
MBD4-210ENST00000515266 SCARF1Q14162 830 aa7.61□□□□□ -1.19
MBD4-210ENST00000515266 C6orf118Q5T5N4 469 aa7.61□□□□□ -1.19
MBD4-210ENST00000515266 CC2D2BQ6DHV5 1058 aa7.61□□□□□ -1.19
MBD4-210ENST00000515266 KIFC2Q96AC6 838 aa7.61□□□□□ -1.19
MBD4-210ENST00000515266 TSEN34Q9BSV6 310 aaKnown RBP7.61□□□□□ -1.19
MBD4-210ENST00000515266 TRAK2O60296 914 aa7.6□□□□□ -1.19
MBD4-210ENST00000515266 HDGFL1Q5TGJ6 251 aa7.6□□□□□ -1.19
MBD4-210ENST00000515266 DOLKQ9UPQ8 538 aa7.6□□□□□ -1.19
MBD4-210ENST00000515266 SPINT1O43278 529 aa7.59□□□□□ -1.19
MBD4-210ENST00000515266 UPP2O95045 317 aa7.59□□□□□ -1.19
MBD4-210ENST00000515266 BMP2P12643 396 aa7.59□□□□□ -1.19
MBD4-210ENST00000515266 RELBQ01201 579 aa7.59□□□□□ -1.19
MBD4-210ENST00000515266 PLPP7Q8NBV4 271 aa7.59□□□□□ -1.19
MBD4-210ENST00000515266 GLMNQ92990 594 aa7.59□□□□□ -1.19
MBD4-210ENST00000515266 TRIM52Q96A61 297 aa7.59□□□□□ -1.19
MBD4-210ENST00000515266 UCN2Q96RP3 112 aa7.59□□□□□ -1.19
MBD4-210ENST00000515266 OSBPL3Q9H4L5 887 aa7.59□□□□□ -1.19
MBD4-210ENST00000515266 PTGIRP43119 386 aa7.58□□□□□ -1.2
MBD4-210ENST00000515266 NFATC2IPQ8NCF5 419 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms