RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 C11orf95C9JLR9 678 aaPredicted RBP7.4□□□□□ -1.22
CAST-242ENST00000515063 TIMP2P16035 220 aa7.4□□□□□ -1.22
CAST-242ENST00000515063 MCCD1P59942 119 aaPredicted RBP7.4□□□□□ -1.22
CAST-242ENST00000515063 KCTD15Q96SI1 283 aaPredicted RBP7.4□□□□□ -1.22
CAST-242ENST00000515063 PGPEP1Q9NXJ5 209 aa7.4□□□□□ -1.22
CAST-242ENST00000515063 UPP2O95045 317 aa7.39□□□□□ -1.23
CAST-242ENST00000515063 ZIC2O95409 532 aaPredicted RBP7.39□□□□□ -1.23
CAST-242ENST00000515063 SCARF1Q14162 830 aa7.39□□□□□ -1.23
CAST-242ENST00000515063 SNRKQ9NRH2 765 aa7.39□□□□□ -1.23
CAST-242ENST00000515063 GMPR2Q9P2T1 348 aaKnown RBP7.39□□□□□ -1.23
CAST-242ENST00000515063 DACH1Q9UI36 760 aa7.39□□□□□ -1.23
CAST-242ENST00000515063 NR3C2P08235 984 aa7.38□□□□□ -1.23
CAST-242ENST00000515063 NR1H3Q13133 447 aa7.38□□□□□ -1.23
CAST-242ENST00000515063 CCDC125Q86Z20 511 aa7.38□□□□□ -1.23
CAST-242ENST00000515063 TRIM47Q96LD4 638 aa7.38□□□□□ -1.23
CAST-242ENST00000515063 OCSTAMPQ9BR26 566 aa7.38□□□□□ -1.23
CAST-242ENST00000515063 TMEM132AQ24JP5 1023 aa7.37□□□□□ -1.23
CAST-242ENST00000515063 SEPT12Q8IYM1 358 aa7.37□□□□□ -1.23
CAST-242ENST00000515063 ITPKCQ96DU7 683 aa7.37□□□□□ -1.23
CAST-242ENST00000515063 KLF16Q9BXK1 252 aaPredicted RBP7.37□□□□□ -1.23
CAST-242ENST00000515063 FBXO45P0C2W1 286 aa7.36□□□□□ -1.23
CAST-242ENST00000515063 MRPL14Q6P1L8 145 aaKnown RBP7.36□□□□□ -1.23
CAST-242ENST00000515063 PCDHB9Q9Y5E1 797 aa7.36□□□□□ -1.23
CAST-242ENST00000515063 POTECB2RU33 542 aa7.35□□□□□ -1.23
CAST-242ENST00000515063 BMP1P13497 986 aa7.35□□□□□ -1.23
CAST-242ENST00000515063 INTS6LQ5JSJ4 861 aaKnown RBP7.35□□□□□ -1.23
CAST-242ENST00000515063 PPP1R26Q5T8A7 1209 aaPredicted RBP7.35□□□□□ -1.23
CAST-242ENST00000515063 RNF20Q5VTR2 975 aa7.35□□□□□ -1.23
CAST-242ENST00000515063 ZFAND3Q9H8U3 227 aa7.35□□□□□ -1.23
CAST-242ENST00000515063 TRIM46Q7Z4K8 759 aa7.34□□□□□ -1.23
CAST-242ENST00000515063 MEIOBQ8N635 442 aa7.34□□□□□ -1.23
CAST-242ENST00000515063 TSEN34Q9BSV6 310 aaKnown RBP7.34□□□□□ -1.23
CAST-242ENST00000515063 FLIIQ13045 1269 aa7.33□□□□□ -1.24
CAST-242ENST00000515063 MCM6Q14566 821 aa7.33□□□□□ -1.24
CAST-242ENST00000515063 WWC1Q8IX03 1113 aa7.33□□□□□ -1.24
CAST-242ENST00000515063 ESPNB1AK53 854 aa7.32□□□□□ -1.24
CAST-242ENST00000515063 EIF4G2P78344 907 aaKnown RBP eCLIP7.32□□□□□ -1.24
CAST-242ENST00000515063 LINC00528Q8N1L1 170 aa7.32□□□□□ -1.24
CAST-242ENST00000515063 ZFP42Q96MM3 310 aa7.32□□□□□ -1.24
CAST-242ENST00000515063 TBC1D2BQ9UPU7 963 aa7.32□□□□□ -1.24
CAST-242ENST00000515063 BMP2P12643 396 aa7.31□□□□□ -1.24
CAST-242ENST00000515063 RAB15P59190 212 aa7.31□□□□□ -1.24
CAST-242ENST00000515063 WASHC4Q2M389 1173 aa7.31□□□□□ -1.24
CAST-242ENST00000515063 PURBQ96QR8 312 aaKnown RBP7.31□□□□□ -1.24
CAST-242ENST00000515063 GPR37L1O60883 481 aa7.3□□□□□ -1.24
CAST-242ENST00000515063 SNRPBP14678 240 aaKnown RBP7.3□□□□□ -1.24
CAST-242ENST00000515063 Q6ZVU0 165 aa7.3□□□□□ -1.24
CAST-242ENST00000515063 ZNF775Q96BV0 537 aaPredicted RBP7.3□□□□□ -1.24
CAST-242ENST00000515063 RAD21O60216 631 aa7.29□□□□□ -1.24
CAST-242ENST00000515063 C6orf118Q5T5N4 469 aa7.29□□□□□ -1.24
CAST-242ENST00000515063 ERVH48-1M5A8F1 160 aa7.28□□□□□ -1.24
CAST-242ENST00000515063 GIGYF1O75420 1035 aaPredicted RBP7.28□□□□□ -1.24
CAST-242ENST00000515063 SOX11P35716 441 aa7.28□□□□□ -1.24
CAST-242ENST00000515063 ABL2P42684 1182 aa7.28□□□□□ -1.24
CAST-242ENST00000515063 ZNF784Q8NCA9 323 aaPredicted RBP7.28□□□□□ -1.24
CAST-242ENST00000515063 ESF1Q9H501 851 aaKnown RBP7.28□□□□□ -1.24
CAST-242ENST00000515063 GDPD2Q9HCC8 539 aa7.28□□□□□ -1.24
CAST-242ENST00000515063 MAN1A2O60476 641 aa7.27□□□□□ -1.25
CAST-242ENST00000515063 CBLBQ13191 982 aa7.27□□□□□ -1.25
CAST-242ENST00000515063 ADH1AP07327 375 aa7.26□□□□□ -1.25
CAST-242ENST00000515063 UBTFP17480 764 aaKnown RBP7.26□□□□□ -1.25
CAST-242ENST00000515063 TMPRSS4Q9NRS4 437 aa7.26□□□□□ -1.25
CAST-242ENST00000515063 SPINT1O43278 529 aa7.25□□□□□ -1.25
CAST-242ENST00000515063 IRF5Q13568 498 aa7.25□□□□□ -1.25
CAST-242ENST00000515063 NPAS3Q8IXF0 933 aa7.25□□□□□ -1.25
CAST-242ENST00000515063 TTLL8A6PVC2 850 aa7.24□□□□□ -1.25
CAST-242ENST00000515063 CC2D2BQ6DHV5 1058 aa7.24□□□□□ -1.25
CAST-242ENST00000515063 SLC16A10Q8TF71 515 aa7.24□□□□□ -1.25
CAST-242ENST00000515063 CYLDQ9NQC7 956 aa7.24□□□□□ -1.25
CAST-242ENST00000515063 NXF1Q9UBU9 619 aaKnown RBP7.24□□□□□ -1.25
CAST-242ENST00000515063 COG6Q9Y2V7 657 aa7.24□□□□□ -1.25
CAST-242ENST00000515063 SOS2Q07890 1332 aaPredicted RBP7.24□□□□□ -1.25
CAST-242ENST00000515063 TERTO14746 1132 aaKnown RBP7.23□□□□□ -1.25
CAST-242ENST00000515063 LILRA1O75019 489 aa7.23□□□□□ -1.25
CAST-242ENST00000515063 MYCP01106 439 aaPredicted RBP7.23□□□□□ -1.25
CAST-242ENST00000515063 RELBQ01201 579 aa7.23□□□□□ -1.25
CAST-242ENST00000515063 VAC14Q08AM6 782 aa7.23□□□□□ -1.25
CAST-242ENST00000515063 SEMA3FQ13275 785 aa7.23□□□□□ -1.25
CAST-242ENST00000515063 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.23□□□□□ -1.257e-8■■■□□ 15.1
CAST-242ENST00000515063 SLFNL1Q499Z3 407 aa7.23□□□□□ -1.25
CAST-242ENST00000515063 CYP2U1Q7Z449 544 aa7.23□□□□□ -1.25
CAST-242ENST00000515063 CEP126Q9P2H0 1117 aa7.23□□□□□ -1.25
CAST-242ENST00000515063 PCDHB11Q9Y5F2 797 aa7.23□□□□□ -1.25
CAST-242ENST00000515063 ATP5J2-PTCD1G3V325 749 aa7.22□□□□□ -1.25
CAST-242ENST00000515063 WFS1O76024 890 aa7.22□□□□□ -1.25
CAST-242ENST00000515063 ERVK-9P63128 1117 aa7.22□□□□□ -1.25
CAST-242ENST00000515063 TREML4Q6UXN2 200 aa7.22□□□□□ -1.25
CAST-242ENST00000515063 AGBL1Q96MI9 1066 aa7.22□□□□□ -1.25
CAST-242ENST00000515063 PTGIRP43119 386 aa7.21□□□□□ -1.26
CAST-242ENST00000515063 SIRT1Q96EB6 747 aa7.21□□□□□ -1.26
CAST-242ENST00000515063 POLMQ9NP87 494 aaPredicted RBP7.21□□□□□ -1.26
CAST-242ENST00000515063 RNF135Q8IUD6 432 aa7.2□□□□□ -1.26
CAST-242ENST00000515063 DNMT3LQ9UJW3 386 aa7.2□□□□□ -1.26
CAST-242ENST00000515063 ADD1P35611 737 aaKnown RBP7.19□□□□□ -1.26
CAST-242ENST00000515063 NFX1Q12986 1120 aaKnown RBP7.19□□□□□ -1.26
CAST-242ENST00000515063 INSM2Q96T92 566 aaPredicted RBP7.19□□□□□ -1.26
CAST-242ENST00000515063 ZNF395Q9H8N7 513 aaPredicted RBP7.19□□□□□ -1.26
CAST-242ENST00000515063 DOLKQ9UPQ8 538 aa7.19□□□□□ -1.26
CAST-242ENST00000515063 USP4Q13107 963 aa7.18□□□□□ -1.26
CAST-242ENST00000515063 MAP7D1Q3KQU3 841 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms