RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 PARP3Q9Y6F1 533 aa9.04□□□□□ -0.96
CCDC30-214ENST00000514642 NCOA1Q15788 1441 aa9.04□□□□□ -0.96
CCDC30-214ENST00000514642 PDE4CQ08493 712 aa9.04□□□□□ -0.96
CCDC30-214ENST00000514642 IDI1Q13907 227 aa9.04□□□□□ -0.96
CCDC30-214ENST00000514642 DUOX2Q9NRD8 1548 aa9.04□□□□□ -0.96
CCDC30-214ENST00000514642 CCT4P50991 539 aaKnown RBP9.03□□□□□ -0.96
CCDC30-214ENST00000514642 MYO1BO43795 1136 aa9.03□□□□□ -0.96
CCDC30-214ENST00000514642 ABCC10Q5T3U5 1492 aa9.03□□□□□ -0.96
CCDC30-214ENST00000514642 TWISTNBQ3B726 338 aaPredicted RBP9.03□□□□□ -0.96
CCDC30-214ENST00000514642 DDB1Q16531 1140 aa9.03□□□□□ -0.96
CCDC30-214ENST00000514642 ABCC2Q92887 1545 aa9.03□□□□□ -0.96
CCDC30-214ENST00000514642 C19orf44Q9H6X5 657 aa9.03□□□□□ -0.96
CCDC30-214ENST00000514642 CTTNBP2Q8WZ74 1663 aa9.03□□□□□ -0.96
CCDC30-214ENST00000514642 RAI14Q9P0K7 980 aa9.02□□□□□ -0.96
CCDC30-214ENST00000514642 IFNL2Q8IZJ0 200 aa9.02□□□□□ -0.96
CCDC30-214ENST00000514642 ZNF287Q9HBT7 754 aa9.02□□□□□ -0.96
CCDC30-214ENST00000514642 PBRM1Q86U86 1689 aa9.02□□□□□ -0.97
CCDC30-214ENST00000514642 PTCD1O75127 700 aaKnown RBP9.02□□□□□ -0.97
CCDC30-214ENST00000514642 TPM3P06753 285 aa9.02□□□□□ -0.97
CCDC30-214ENST00000514642 PPP1R42Q7Z4L9 355 aa9.02□□□□□ -0.97
CCDC30-214ENST00000514642 GNAI2P04899 355 aa9.02□□□□□ -0.97
CCDC30-214ENST00000514642 TPM1P09493 284 aa9.02□□□□□ -0.97
CCDC30-214ENST00000514642 ANKRD20A12PQ8NF67 263 aa9.02□□□□□ -0.97
CCDC30-214ENST00000514642 WDR97A6NE52 1622 aa9.02□□□□□ -0.97
CCDC30-214ENST00000514642 PSMA5P28066 241 aa9.02□□□□□ -0.97
CCDC30-214ENST00000514642 CRACR2BQ8N4Y2 399 aaPredicted RBP9.02□□□□□ -0.97
CCDC30-214ENST00000514642 SRCIN1Q9C0H9 1055 aa9.02□□□□□ -0.97
CCDC30-214ENST00000514642 ATP10AO60312 1499 aa9.01□□□□□ -0.97
CCDC30-214ENST00000514642 NF2P35240 595 aa9.01□□□□□ -0.97
CCDC30-214ENST00000514642 BAG6P46379 1132 aa9.01□□□□□ -0.97
CCDC30-214ENST00000514642 DDX46Q7L014 1031 aaKnown RBP9.01□□□□□ -0.97
CCDC30-214ENST00000514642 CENPQQ7L2Z9 268 aaPredicted RBP9.01□□□□□ -0.97
CCDC30-214ENST00000514642 ANKRD24Q8TF21 1146 aa9.01□□□□□ -0.97
CCDC30-214ENST00000514642 FMNL2Q96PY5 1086 aa9.01□□□□□ -0.97
CCDC30-214ENST00000514642 CDCA7Q9BWT1 371 aaPredicted RBP9.01□□□□□ -0.97
CCDC30-214ENST00000514642 HDAC9Q9UKV0 1011 aa9.01□□□□□ -0.97
CCDC30-214ENST00000514642 C11orf95C9JLR9 678 aaPredicted RBP9.01□□□□□ -0.97
CCDC30-214ENST00000514642 LMOD1P29536 600 aaPredicted RBP9.01□□□□□ -0.97
CCDC30-214ENST00000514642 TFCP2L1Q9NZI6 479 aa9.01□□□□□ -0.97
CCDC30-214ENST00000514642 NOS1P29475 1434 aa9.01□□□□□ -0.97
CCDC30-214ENST00000514642 SURF6O75683 361 aaKnown RBP9.01□□□□□ -0.97
CCDC30-214ENST00000514642 AAMPQ13685 434 aa9.01□□□□□ -0.97
CCDC30-214ENST00000514642 NBPF1Q3BBV0 1214 aa9.01□□□□□ -0.97
CCDC30-214ENST00000514642 INTS3Q68E01 1043 aaKnown RBP9.01□□□□□ -0.97
CCDC30-214ENST00000514642 SLC4A2P04920 1241 aa9□□□□□ -0.97
CCDC30-214ENST00000514642 PPP2R1AP30153 589 aa9□□□□□ -0.97
CCDC30-214ENST00000514642 RRP12Q5JTH9 1297 aaKnown RBP9□□□□□ -0.97
CCDC30-214ENST00000514642 PCMTD1Q96MG8 357 aaPredicted RBP9□□□□□ -0.97
CCDC30-214ENST00000514642 PRKRIP1Q9H875 184 aaPredicted RBP9□□□□□ -0.97
CCDC30-214ENST00000514642 AKAP2Q9Y2D5 859 aa9□□□□□ -0.97
CCDC30-214ENST00000514642 NSD3Q9BZ95 1437 aa9□□□□□ -0.97
CCDC30-214ENST00000514642 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9□□□□□ -0.97
CCDC30-214ENST00000514642 TTC21BQ7Z4L5 1316 aa9□□□□□ -0.97
CCDC30-214ENST00000514642 CDK5RAP3Q96JB5 506 aa9□□□□□ -0.97
CCDC30-214ENST00000514642 COG6Q9Y2V7 657 aa9□□□□□ -0.97
CCDC30-214ENST00000514642 KIF7Q2M1P5 1343 aa9□□□□□ -0.97
CCDC30-214ENST00000514642 IFIT1P09914 478 aaKnown RBP9□□□□□ -0.97
CCDC30-214ENST00000514642 TTC21AQ8NDW8 1320 aa9□□□□□ -0.97
CCDC30-214ENST00000514642 ZCRB1Q8TBF4 217 aaKnown RBP9□□□□□ -0.97
CCDC30-214ENST00000514642 KIAA0556O60303 1618 aa9□□□□□ -0.97
CCDC30-214ENST00000514642 ZMYM3Q14202 1370 aa9□□□□□ -0.97
CCDC30-214ENST00000514642 CEP126Q9P2H0 1117 aa9□□□□□ -0.97
CCDC30-214ENST00000514642 LRP2BPQ9P2M1 347 aa9□□□□□ -0.97
CCDC30-214ENST00000514642 FCHSD2O94868 740 aa8.99□□□□□ -0.97
CCDC30-214ENST00000514642 SOGA3Q5TF21 947 aa8.99□□□□□ -0.97
CCDC30-214ENST00000514642 ATP6V1AP38606 617 aa8.99□□□□□ -0.97
CCDC30-214ENST00000514642 TRMT112Q9UI30 125 aaKnown RBP8.99□□□□□ -0.97
CCDC30-214ENST00000514642 C6orf229H3BNL8 230 aa8.99□□□□□ -0.97
CCDC30-214ENST00000514642 USHBP1Q8N6Y0 703 aa8.99□□□□□ -0.97
CCDC30-214ENST00000514642 NAIPQ13075 1403 aa8.99□□□□□ -0.97
CCDC30-214ENST00000514642 THOC2Q8NI27 1593 aaKnown RBP8.99□□□□□ -0.97
CCDC30-214ENST00000514642 ACSBG1Q96GR2 724 aa8.99□□□□□ -0.97
CCDC30-214ENST00000514642 MPHOSPH6Q99547 160 aaKnown RBP8.99□□□□□ -0.97
CCDC30-214ENST00000514642 ABCC5O15440 1437 aa8.99□□□□□ -0.97
CCDC30-214ENST00000514642 USP5P45974 858 aa8.99□□□□□ -0.97
CCDC30-214ENST00000514642 METTL24Q5JXM2 366 aa8.99□□□□□ -0.97
CCDC30-214ENST00000514642 BRD4O60885 1362 aaPredicted RBP8.99□□□□□ -0.97
CCDC30-214ENST00000514642 SLC5A1P13866 664 aa8.98□□□□□ -0.97
CCDC30-214ENST00000514642 CHRNA2Q15822 529 aa8.98□□□□□ -0.97
CCDC30-214ENST00000514642 TCP11L2Q8N4U5 519 aa8.98□□□□□ -0.97
CCDC30-214ENST00000514642 ATP10BO94823 1461 aa8.98□□□□□ -0.97
CCDC30-214ENST00000514642 A0A0U1RQG5 324 aaPredicted RBP8.98□□□□□ -0.97
CCDC30-214ENST00000514642 LARP1Q6PKG0 1096 aaKnown RBP8.98□□□□□ -0.97
CCDC30-214ENST00000514642 DZIP1Q86YF9 867 aaKnown RBP8.98□□□□□ -0.97
CCDC30-214ENST00000514642 TMEM87AQ8NBN3 555 aa8.98□□□□□ -0.97
CCDC30-214ENST00000514642 CDC5LQ99459 802 aaKnown RBP8.98□□□□□ -0.97
CCDC30-214ENST00000514642 SLKQ9H2G2 1235 aaPredicted RBP8.98□□□□□ -0.97
CCDC30-214ENST00000514642 SPDYE4A6NLX3 237 aa8.98□□□□□ -0.97
CCDC30-214ENST00000514642 NBPF6Q5VWK0 638 aa8.98□□□□□ -0.97
CCDC30-214ENST00000514642 NBPF5PQ86XG9 351 aaPredicted RBP8.98□□□□□ -0.97
CCDC30-214ENST00000514642 NBPF4Q96M43 638 aa8.98□□□□□ -0.97
CCDC30-214ENST00000514642 POLR3DP05423 398 aaPredicted RBP8.97□□□□□ -0.97
CCDC30-214ENST00000514642 GRM1Q13255 1194 aa8.97□□□□□ -0.97
CCDC30-214ENST00000514642 ZNF772Q68DY9 489 aaPredicted RBP8.97□□□□□ -0.97
CCDC30-214ENST00000514642 ATF7IPQ6VMQ6 1270 aa8.97□□□□□ -0.97
CCDC30-214ENST00000514642 NYXQ9GZU5 481 aa8.97□□□□□ -0.97
CCDC30-214ENST00000514642 ZFYVE16Q7Z3T8 1539 aa8.97□□□□□ -0.97
CCDC30-214ENST00000514642 CCDC69A6NI79 296 aa8.97□□□□□ -0.97
CCDC30-214ENST00000514642 EPS15P42566 896 aa8.97□□□□□ -0.97
CCDC30-214ENST00000514642 TAF7Q15545 349 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms