RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 LMOD1P29536 600 aaPredicted RBP9.9□□□□□ -0.82
HMGCS1-207ENST00000514610 SLFNL1Q499Z3 407 aa9.9□□□□□ -0.82
HMGCS1-207ENST00000514610 RNF135Q8IUD6 432 aa9.9□□□□□ -0.82
HMGCS1-207ENST00000514610 CCDC85AQ96PX6 553 aaPredicted RBP9.9□□□□□ -0.82
HMGCS1-207ENST00000514610 CHIC2Q9UKJ5 165 aa9.9□□□□□ -0.82
HMGCS1-207ENST00000514610 TLL2Q9Y6L7 1015 aa9.9□□□□□ -0.82
HMGCS1-207ENST00000514610 SIAH2O43255 324 aa9.89□□□□□ -0.83
HMGCS1-207ENST00000514610 PRKD2Q9BZL6 878 aa9.89□□□□□ -0.83
HMGCS1-207ENST00000514610 USP17L5A8MUK1 530 aa9.88□□□□□ -0.83
HMGCS1-207ENST00000514610 WNT7AO00755 349 aa9.88□□□□□ -0.83
HMGCS1-207ENST00000514610 ZNF697Q5TEC3 545 aa9.88□□□□□ -0.83
HMGCS1-207ENST00000514610 HOMEZQ8IX15 550 aa9.88□□□□□ -0.83
HMGCS1-207ENST00000514610 MRGPRX2Q96LB1 330 aa9.88□□□□□ -0.83
HMGCS1-207ENST00000514610 MAP4K5Q9Y4K4 846 aa9.88□□□□□ -0.83
HMGCS1-207ENST00000514610 USP17L3A6NCW0 530 aa9.87□□□□□ -0.83
HMGCS1-207ENST00000514610 USP17L4A6NCW7 530 aa9.87□□□□□ -0.83
HMGCS1-207ENST00000514610 NBPF20Q3BBV1 942 aa9.87□□□□□ -0.83
HMGCS1-207ENST00000514610 TRAF7Q6Q0C0 670 aa9.87□□□□□ -0.83
HMGCS1-207ENST00000514610 USP17L2Q6R6M4 530 aa9.87□□□□□ -0.83
HMGCS1-207ENST00000514610 USP17L1Q7RTZ2 530 aa9.87□□□□□ -0.83
HMGCS1-207ENST00000514610 ZNF598Q86UK7 904 aaKnown RBP9.87□□□□□ -0.83
HMGCS1-207ENST00000514610 DEPDC4Q8N2C3 294 aa9.87□□□□□ -0.83
HMGCS1-207ENST00000514610 PLPP7Q8NBV4 271 aa9.87□□□□□ -0.83
HMGCS1-207ENST00000514610 CDK15Q96Q40 435 aa9.87□□□□□ -0.83
HMGCS1-207ENST00000514610 KCTD15Q96SI1 283 aaPredicted RBP9.87□□□□□ -0.83
HMGCS1-207ENST00000514610 VASH1Q7L8A9 365 aaPredicted RBP9.86□□□□□ -0.83
HMGCS1-207ENST00000514610 PLEKHM2Q8IWE5 1019 aa9.86□□□□□ -0.83
HMGCS1-207ENST00000514610 PBXIP1Q96AQ6 731 aa9.86□□□□□ -0.83
HMGCS1-207ENST00000514610 PKD2L1Q9P0L9 805 aa9.86□□□□□ -0.83
HMGCS1-207ENST00000514610 CDV3Q9UKY7 258 aaKnown RBP9.86□□□□□ -0.83
HMGCS1-207ENST00000514610 V9GY48 417 aaPredicted RBP9.86□□□□□ -0.83
HMGCS1-207ENST00000514610 ARID5BQ14865 1188 aa9.85□□□□□ -0.83
HMGCS1-207ENST00000514610 CDCA8Q53HL2 280 aa9.85□□□□□ -0.83
HMGCS1-207ENST00000514610 INTS6LQ5JSJ4 861 aaKnown RBP9.85□□□□□ -0.83
HMGCS1-207ENST00000514610 KANK4Q5T7N3 995 aaPredicted RBP9.85□□□□□ -0.83
HMGCS1-207ENST00000514610 PPP1R15AO75807 674 aaPredicted RBP9.84□□□□□ -0.83
HMGCS1-207ENST00000514610 GRM5P41594 1212 aa9.84□□□□□ -0.83
HMGCS1-207ENST00000514610 RAB15P59190 212 aa9.84□□□□□ -0.83
HMGCS1-207ENST00000514610 NCOA4Q13772 614 aa9.84□□□□□ -0.83
HMGCS1-207ENST00000514610 MPNDQ8N594 471 aa9.84□□□□□ -0.83
HMGCS1-207ENST00000514610 CDCA7Q9BWT1 371 aaPredicted RBP9.84□□□□□ -0.83
HMGCS1-207ENST00000514610 FSHRP23945 695 aa9.83□□□□□ -0.84
HMGCS1-207ENST00000514610 FOXC1Q12948 553 aa9.83□□□□□ -0.84
HMGCS1-207ENST00000514610 DOLKQ9UPQ8 538 aa9.83□□□□□ -0.84
HMGCS1-207ENST00000514610 MAP7D1Q3KQU3 841 aa9.82□□□□□ -0.84
HMGCS1-207ENST00000514610 Q6ZNB5 142 aa9.82□□□□□ -0.84
HMGCS1-207ENST00000514610 SEPT12Q8IYM1 358 aa9.82□□□□□ -0.84
HMGCS1-207ENST00000514610 RNF20Q5VTR2 975 aa9.81□□□□□ -0.84
HMGCS1-207ENST00000514610 PCDHB11Q9Y5F2 797 aa9.81□□□□□ -0.84
HMGCS1-207ENST00000514610 ERVH48-1M5A8F1 160 aa9.8□□□□□ -0.84
HMGCS1-207ENST00000514610 GDF9O60383 454 aa9.8□□□□□ -0.84
HMGCS1-207ENST00000514610 ADH1CP00326 375 aa9.8□□□□□ -0.84
HMGCS1-207ENST00000514610 OXLD1Q5BKU9 147 aa9.8□□□□□ -0.84
HMGCS1-207ENST00000514610 TRIM67Q6ZTA4 783 aa9.8□□□□□ -0.84
HMGCS1-207ENST00000514610 MKRN1Q9UHC7 482 aaKnown RBP9.8□□□□□ -0.84
HMGCS1-207ENST00000514610 NR3C2P08235 984 aa9.79□□□□□ -0.84
HMGCS1-207ENST00000514610 RETREG2Q8NC44 543 aa9.79□□□□□ -0.84
HMGCS1-207ENST00000514610 VRTNQ9H8Y1 702 aa9.79□□□□□ -0.84
HMGCS1-207ENST00000514610 TNFRSF10AO00220 468 aa9.78□□□□□ -0.84
HMGCS1-207ENST00000514610 SCTRP47872 440 aa9.78□□□□□ -0.84
HMGCS1-207ENST00000514610 EML3Q32P44 896 aa9.78□□□□□ -0.84
HMGCS1-207ENST00000514610 TMPRSS4Q9NRS4 437 aa9.78□□□□□ -0.84
HMGCS1-207ENST00000514610 LZTS3O60299 673 aaPredicted RBP9.77□□□□□ -0.85
HMGCS1-207ENST00000514610 ATG7O95352 703 aa9.77□□□□□ -0.85
HMGCS1-207ENST00000514610 ALDH1A1P00352 501 aa9.77□□□□□ -0.85
HMGCS1-207ENST00000514610 CRTC2Q53ET0 693 aaPredicted RBP9.76□□□□□ -0.85
HMGCS1-207ENST00000514610 J3QL48 77 aa9.75□□□□□ -0.85
HMGCS1-207ENST00000514610 LCE2BO14633 110 aa9.75□□□□□ -0.85
HMGCS1-207ENST00000514610 CLDN10P78369 228 aa9.75□□□□□ -0.85
HMGCS1-207ENST00000514610 NR5A1Q13285 461 aa9.75□□□□□ -0.85
HMGCS1-207ENST00000514610 PPP1R26Q5T8A7 1209 aaPredicted RBP9.75□□□□□ -0.85
HMGCS1-207ENST00000514610 CCDC125Q86Z20 511 aa9.75□□□□□ -0.85
HMGCS1-207ENST00000514610 CCDC116Q8IYX3 515 aa9.75□□□□□ -0.85
HMGCS1-207ENST00000514610 SNIP1Q8TAD8 396 aaKnown RBP9.75□□□□□ -0.85
HMGCS1-207ENST00000514610 TOR4AQ9NXH8 423 aa9.75□□□□□ -0.85
HMGCS1-207ENST00000514610 NOD1Q9Y239 953 aa9.75□□□□□ -0.85
HMGCS1-207ENST00000514610 ATP5J2-PTCD1G3V325 749 aa9.74□□□□□ -0.85
HMGCS1-207ENST00000514610 NNTQ13423 1086 aa9.74□□□□□ -0.85
HMGCS1-207ENST00000514610 ZNF784Q8NCA9 323 aaPredicted RBP9.74□□□□□ -0.85
HMGCS1-207ENST00000514610 ZMIZ1Q9ULJ6 1067 aa9.74□□□□□ -0.85
HMGCS1-207ENST00000514610 KIAA1024Q9UPX6 916 aa9.74□□□□□ -0.85
HMGCS1-207ENST00000514610 ACIN1Q9UKV3 1341 aaKnown RBP9.74□□□□□ -0.85
HMGCS1-207ENST00000514610 FAM196BA6NMK8 535 aa9.73□□□□□ -0.85
HMGCS1-207ENST00000514610 USP17L15C9J2P7 530 aa9.73□□□□□ -0.85
HMGCS1-207ENST00000514610 USP17L10C9JJH3 530 aa9.73□□□□□ -0.85
HMGCS1-207ENST00000514610 USP17L13C9JLJ4 530 aa9.73□□□□□ -0.85
HMGCS1-207ENST00000514610 USP17L12C9JPN9 530 aa9.73□□□□□ -0.85
HMGCS1-207ENST00000514610 USP17L11C9JVI0 530 aa9.73□□□□□ -0.85
HMGCS1-207ENST00000514610 USP17L21D6R901 530 aa9.73□□□□□ -0.85
HMGCS1-207ENST00000514610 USP17L18D6R9N7 530 aa9.73□□□□□ -0.85
HMGCS1-207ENST00000514610 USP17L22D6RA61 530 aa9.73□□□□□ -0.85
HMGCS1-207ENST00000514610 USP17L17D6RBQ6 530 aa9.73□□□□□ -0.85
HMGCS1-207ENST00000514610 USP17L19D6RCP7 530 aa9.73□□□□□ -0.85
HMGCS1-207ENST00000514610 USP17L20D6RJB6 530 aa9.73□□□□□ -0.85
HMGCS1-207ENST00000514610 RASA1P20936 1047 aa9.73□□□□□ -0.85
HMGCS1-207ENST00000514610 ERVK-9P63128 1117 aa9.73□□□□□ -0.85
HMGCS1-207ENST00000514610 USP17L24Q0WX57 530 aa9.73□□□□□ -0.85
HMGCS1-207ENST00000514610 PTK7Q13308 1070 aa9.73□□□□□ -0.85
HMGCS1-207ENST00000514610 LAPTM4AQ15012 233 aa9.73□□□□□ -0.85
HMGCS1-207ENST00000514610 OGFOD1Q8N543 542 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms