RNA–Protein interactions for RNA: ENST00000514515.5

NREP-222, Transcript of neuronal regeneration related protein, human

TSL 1 (best)

Gene NREP, Length 3,564 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NREP-222	ENST00000514515	CABP1	Q9NZU7	370 aa		7.75	□□□□□ -1.17
NREP-222	ENST00000514515	CLTCL1	P53675	1640 aa		7.75	□□□□□ -1.17
NREP-222	ENST00000514515	GSPT1	P15170	499 aa	Known RBP	7.75	□□□□□ -1.17
NREP-222	ENST00000514515	SIRT2	Q8IXJ6	389 aa		7.75	□□□□□ -1.17
NREP-222	ENST00000514515	MRPL50	Q8N5N7	158 aa	Known RBP	7.75	□□□□□ -1.17
NREP-222	ENST00000514515	OTUD7A	Q8TE49	926 aa	Predicted RBP	7.75	□□□□□ -1.17
NREP-222	ENST00000514515	CFAP44	Q96MT7	982 aa		7.75	□□□□□ -1.17
NREP-222	ENST00000514515	PRAM1	Q96QH2	718 aa		7.75	□□□□□ -1.17
NREP-222	ENST00000514515	LMBRD1	Q9NUN5	540 aa		7.75	□□□□□ -1.17
NREP-222	ENST00000514515	SBNO2	Q9Y2G9	1366 aa		7.75	□□□□□ -1.17
NREP-222	ENST00000514515	CD109	Q6YHK3	1445 aa		7.74	□□□□□ -1.17
NREP-222	ENST00000514515	IQSEC2	Q5JU85	1478 aa		7.74	□□□□□ -1.17
NREP-222	ENST00000514515	NEK4	P51957	841 aa		7.74	□□□□□ -1.17
NREP-222	ENST00000514515	DCTN1	Q14203	1278 aa		7.74	□□□□□ -1.17
NREP-222	ENST00000514515	PLEKHM2	Q8IWE5	1019 aa		7.74	□□□□□ -1.17
NREP-222	ENST00000514515	PPIP5K1	Q6PFW1	1433 aa		7.74	□□□□□ -1.17
NREP-222	ENST00000514515	NCOA3	Q9Y6Q9	1424 aa		7.74	□□□□□ -1.17
NREP-222	ENST00000514515	REC8	O95072	547 aa		7.74	□□□□□ -1.17
NREP-222	ENST00000514515	ZNF445	P59923	1031 aa		7.74	□□□□□ -1.17
NREP-222	ENST00000514515	NCBP3	Q53F19	620 aa	Known RBP	7.74	□□□□□ -1.17
NREP-222	ENST00000514515	SLC4A10	Q6U841	1118 aa		7.74	□□□□□ -1.17
NREP-222	ENST00000514515	CWC22	Q9HCG8	908 aa	Known RBP	7.74	□□□□□ -1.17
NREP-222	ENST00000514515		A0A1W2PP64	1363 aa		7.74	□□□□□ -1.17
NREP-222	ENST00000514515	NFE2L2	Q16236	605 aa		7.73	□□□□□ -1.17
NREP-222	ENST00000514515	C8orf58	Q8NAV2	365 aa		7.73	□□□□□ -1.17
NREP-222	ENST00000514515	USP26	Q9BXU7	913 aa		7.73	□□□□□ -1.17
NREP-222	ENST00000514515	MBIP	Q9NS73	344 aa		7.73	□□□□□ -1.17
NREP-222	ENST00000514515	NSD2	O96028	1365 aa		7.73	□□□□□ -1.17
NREP-222	ENST00000514515	MYOM1	P52179	1685 aa		7.73	□□□□□ -1.17
NREP-222	ENST00000514515	FAM83G	A6ND36	823 aa		7.73	□□□□□ -1.17
NREP-222	ENST00000514515	CSPP1	Q1MSJ5	1256 aa		7.73	□□□□□ -1.17
NREP-222	ENST00000514515	TTC22	Q5TAA0	569 aa		7.73	□□□□□ -1.17
NREP-222	ENST00000514515	ZNF428	Q96B54	188 aa		7.73	□□□□□ -1.17
NREP-222	ENST00000514515	NOL7	Q9UMY1	257 aa	Known RBP	7.73	□□□□□ -1.17
NREP-222	ENST00000514515	SDS	P20132	328 aa		7.72	□□□□□ -1.17
NREP-222	ENST00000514515	CCDC39	Q9UFE4	941 aa		7.72	□□□□□ -1.17
NREP-222	ENST00000514515	GPT2	Q8TD30	523 aa		7.72	□□□□□ -1.17
NREP-222	ENST00000514515	TRIM6-TRIM34	B2RNG4	842 aa		7.72	□□□□□ -1.17
NREP-222	ENST00000514515	ARHGAP45	Q92619	1136 aa		7.72	□□□□□ -1.17
NREP-222	ENST00000514515	CDK19	Q9BWU1	502 aa		7.72	□□□□□ -1.17
NREP-222	ENST00000514515	GDPD2	Q9HCC8	539 aa		7.72	□□□□□ -1.17
NREP-222	ENST00000514515	ZKSCAN5	Q9Y2L8	839 aa		7.72	□□□□□ -1.17
NREP-222	ENST00000514515	VIRMA	Q69YN4	1812 aa	Known RBP	7.72	□□□□□ -1.17
NREP-222	ENST00000514515	RILPL2	Q969X0	211 aa		7.71	□□□□□ -1.17
NREP-222	ENST00000514515	MAP7D2	Q96T17	732 aa		7.71	□□□□□ -1.17
NREP-222	ENST00000514515	PRDM10	Q9NQV6	1147 aa		7.71	□□□□□ -1.17
NREP-222	ENST00000514515	TMEM63C	Q9P1W3	806 aa		7.71	□□□□□ -1.17
NREP-222	ENST00000514515	EMILIN1	Q9Y6C2	1016 aa		7.71	□□□□□ -1.17
NREP-222	ENST00000514515	SOX12	O15370	315 aa		7.71	□□□□□ -1.18
NREP-222	ENST00000514515	KIAA2012	Q0VF49	1180 aa		7.71	□□□□□ -1.18
NREP-222	ENST00000514515	LRSAM1	Q6UWE0	723 aa		7.71	□□□□□ -1.18
NREP-222	ENST00000514515	DCTPP1	Q9H773	170 aa		7.71	□□□□□ -1.18
NREP-222	ENST00000514515	RPGRIP1L	Q68CZ1	1315 aa		7.71	□□□□□ -1.18
NREP-222	ENST00000514515	ERC2	O15083	957 aa		7.71	□□□□□ -1.18
NREP-222	ENST00000514515	TSHZ3	Q63HK5	1081 aa		7.71	□□□□□ -1.18
NREP-222	ENST00000514515	SYAP1	Q96A49	352 aa	Predicted RBP	7.71	□□□□□ -1.18
NREP-222	ENST00000514515	ANO2	Q9NQ90	1003 aa		7.71	□□□□□ -1.18
NREP-222	ENST00000514515	NSFL1C	Q9UNZ2	370 aa	Known RBP	7.71	□□□□□ -1.18
NREP-222	ENST00000514515	CEP152	O94986	1710 aa		7.71	□□□□□ -1.18
NREP-222	ENST00000514515	MYOM2	P54296	1465 aa		7.7	□□□□□ -1.18
NREP-222	ENST00000514515	MCC	P23508	829 aa		7.7	□□□□□ -1.18
NREP-222	ENST00000514515	KRT24	Q2M2I5	525 aa		7.7	□□□□□ -1.18
NREP-222	ENST00000514515	HS1BP3	Q53T59	392 aa		7.7	□□□□□ -1.18
NREP-222	ENST00000514515	ZNF830	Q96NB3	372 aa	Predicted RBP	7.7	□□□□□ -1.18
NREP-222	ENST00000514515	TSPY26P	Q9H489	355 aa		7.7	□□□□□ -1.18
NREP-222	ENST00000514515	IFT57	Q9NWB7	429 aa		7.7	□□□□□ -1.18
NREP-222	ENST00000514515	DIP2B	Q9P265	1576 aa		7.7	□□□□□ -1.18
NREP-222	ENST00000514515	SPHKAP	Q2M3C7	1700 aa		7.7	□□□□□ -1.18
NREP-222	ENST00000514515	UHRF1BP1L	A0JNW5	1464 aa		7.7	□□□□□ -1.18
NREP-222	ENST00000514515	FANCA	O15360	1455 aa		7.7	□□□□□ -1.18
NREP-222	ENST00000514515	MBD3	O95983	291 aa		7.7	□□□□□ -1.18
NREP-222	ENST00000514515	NPM1	P06748	294 aa	Known RBP eCLIP	7.7	□□□□□ -1.18
NREP-222	ENST00000514515	LMOD3	Q0VAK6	560 aa		7.7	□□□□□ -1.18
NREP-222	ENST00000514515	POLK	Q9UBT6	870 aa		7.7	□□□□□ -1.18
NREP-222	ENST00000514515	MAP3K4	Q9Y6R4	1608 aa		7.7	□□□□□ -1.18
NREP-222	ENST00000514515	ABCA6	Q8N139	1617 aa		7.7	□□□□□ -1.18
NREP-222	ENST00000514515	ABCC1	P33527	1531 aa		7.69	□□□□□ -1.18
NREP-222	ENST00000514515	HMMR	O75330	724 aa		7.69	□□□□□ -1.18
NREP-222	ENST00000514515	IDI1	Q13907	227 aa		7.69	□□□□□ -1.18
NREP-222	ENST00000514515	RRS1	Q15050	365 aa	Known RBP	7.69	□□□□□ -1.18
NREP-222	ENST00000514515	CLEC17A	Q6ZS10	378 aa		7.69	□□□□□ -1.18
NREP-222	ENST00000514515	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	7.69	□□□□□ -1.18
NREP-222	ENST00000514515	TMX3	Q96JJ7	454 aa		7.69	□□□□□ -1.18
NREP-222	ENST00000514515	UPF3B	Q9BZI7	483 aa	Known RBP	7.69	□□□□□ -1.18
NREP-222	ENST00000514515	ADGRL1	O94910	1474 aa		7.69	□□□□□ -1.18
NREP-222	ENST00000514515	ZNF500	O60304	480 aa	Predicted RBP	7.69	□□□□□ -1.18
NREP-222	ENST00000514515	IBTK	Q9P2D0	1353 aa	Predicted RBP	7.69	□□□□□ -1.18
NREP-222	ENST00000514515	SASS6	Q6UVJ0	657 aa		7.69	□□□□□ -1.18
NREP-222	ENST00000514515	RPAP2	Q8IXW5	612 aa	Predicted RBP	7.69	□□□□□ -1.18
NREP-222	ENST00000514515	PUS7	Q96PZ0	661 aa	Known RBP	7.69	□□□□□ -1.18
NREP-222	ENST00000514515	MEIS3	Q99687	375 aa		7.69	□□□□□ -1.18
NREP-222	ENST00000514515	ANKRD44	Q8N8A2	993 aa		7.68	□□□□□ -1.18
NREP-222	ENST00000514515	TSC1	Q92574	1164 aa		7.68	□□□□□ -1.18
NREP-222	ENST00000514515	EXOC6B	Q9Y2D4	811 aa		7.68	□□□□□ -1.18
NREP-222	ENST00000514515	ABCC4	O15439	1325 aa		7.68	□□□□□ -1.18
NREP-222	ENST00000514515	SLC4A2	P04920	1241 aa		7.68	□□□□□ -1.18
NREP-222	ENST00000514515	ZRANB1	Q9UGI0	708 aa		7.68	□□□□□ -1.18
NREP-222	ENST00000514515	ZDHHC9	Q9Y397	364 aa		7.68	□□□□□ -1.18
NREP-222	ENST00000514515	DYNC1I1	O14576	645 aa		7.67	□□□□□ -1.18
NREP-222	ENST00000514515	PHF14	O94880	888 aa		7.67	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms