RNA–Protein interactions for RNA: ENST00000514497.6

SNCAIP-220, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-220ENST00000514497 APBA3O96018 575 aa22.67■■□□□ 1.22
SNCAIP-220ENST00000514497 PMFBP1Q8TBY8 1022 aa22.67■■□□□ 1.22
SNCAIP-220ENST00000514497 SPON1Q9HCB6 807 aa22.67■■□□□ 1.22
SNCAIP-220ENST00000514497 NRKQ7Z2Y5 1582 aa22.67■■□□□ 1.22
SNCAIP-220ENST00000514497 SPATA31A5Q5VU36 1347 aa22.66■■□□□ 1.22
SNCAIP-220ENST00000514497 SPATA31A7Q8IWB4 1347 aa22.66■■□□□ 1.22
SNCAIP-220ENST00000514497 NBPF14Q5TI25 921 aa22.66■■□□□ 1.22
SNCAIP-220ENST00000514497 TTC21AQ8NDW8 1320 aa22.65■■□□□ 1.22
SNCAIP-220ENST00000514497 KIF20BQ96Q89 1820 aa22.65■■□□□ 1.22
SNCAIP-220ENST00000514497 SSH2Q76I76 1423 aa22.65■■□□□ 1.22
SNCAIP-220ENST00000514497 AMER1Q5JTC6 1135 aaPredicted RBP22.64■■□□□ 1.21
SNCAIP-220ENST00000514497 FAM196AQ6ZSG2 479 aa22.64■■□□□ 1.21
SNCAIP-220ENST00000514497 ANKRD26Q9UPS8 1709 aa22.63■■□□□ 1.21
SNCAIP-220ENST00000514497 ANP32CO43423 234 aa22.63■■□□□ 1.21
SNCAIP-220ENST00000514497 ZNF784Q8NCA9 323 aaPredicted RBP22.63■■□□□ 1.21
SNCAIP-220ENST00000514497 KCNQ2O43526 872 aa22.62■■□□□ 1.21
SNCAIP-220ENST00000514497 TTC21BQ7Z4L5 1316 aa22.6■■□□□ 1.21
SNCAIP-220ENST00000514497 RALBP1Q15311 655 aa22.6■■□□□ 1.21
SNCAIP-220ENST00000514497 TRPM3Q9HCF6 1732 aaPredicted RBP22.58■■□□□ 1.21
SNCAIP-220ENST00000514497 USP54Q70EL1 1684 aa22.58■■□□□ 1.2
SNCAIP-220ENST00000514497 FYB1O15117 783 aa22.57■■□□□ 1.2
SNCAIP-220ENST00000514497 PRKRIP1Q9H875 184 aaPredicted RBP22.57■■□□□ 1.2
SNCAIP-220ENST00000514497 USP31Q70CQ4 1352 aa22.54■■□□□ 1.2
SNCAIP-220ENST00000514497 UTRNP46939 3433 aa22.54■■□□□ 1.2
SNCAIP-220ENST00000514497 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.54■■□□□ 1.2
SNCAIP-220ENST00000514497 ALS2Q96Q42 1657 aa22.54■■□□□ 1.2
SNCAIP-220ENST00000514497 C1QTNF8P60827 252 aa22.53■■□□□ 1.2
SNCAIP-220ENST00000514497 CC2D1BQ5T0F9 858 aaKnown RBP22.53■■□□□ 1.2
SNCAIP-220ENST00000514497 SPATA31A1Q5TZJ5 1347 aa22.53■■□□□ 1.2
SNCAIP-220ENST00000514497 PIK3C2AO00443 1686 aa22.52■■□□□ 1.2
SNCAIP-220ENST00000514497 CHD4Q14839 1912 aa22.52■■□□□ 1.2
SNCAIP-220ENST00000514497 COG3Q96JB2 828 aa22.51■■□□□ 1.19
SNCAIP-220ENST00000514497 PAK3O75914 559 aaPredicted RBP22.5■■□□□ 1.19
SNCAIP-220ENST00000514497 MORC1Q86VD1 984 aa22.5■■□□□ 1.19
SNCAIP-220ENST00000514497 ABTB2Q8N961 1025 aa22.5■■□□□ 1.19
SNCAIP-220ENST00000514497 PRDM11Q9NQV5 511 aa22.5■■□□□ 1.19
SNCAIP-220ENST00000514497 CRYBG1Q9Y4K1 1723 aa22.5■■□□□ 1.19
SNCAIP-220ENST00000514497 PDE3BQ13370 1112 aa22.49■■□□□ 1.19
SNCAIP-220ENST00000514497 OVOS2A0A0J9YW53 1432 aa22.48■■□□□ 1.19
SNCAIP-220ENST00000514497 OVOS2Q6IE36 1432 aa22.48■■□□□ 1.19
SNCAIP-220ENST00000514497 NLRP13Q86W25 1043 aa22.48■■□□□ 1.19
SNCAIP-220ENST00000514497 NME9Q86XW9 330 aa22.48■■□□□ 1.19
SNCAIP-220ENST00000514497 GGNBP2Q9H3C7 697 aa22.48■■□□□ 1.19
SNCAIP-220ENST00000514497 MYBBP1AQ9BQG0 1328 aaKnown RBP22.48■■□□□ 1.19
SNCAIP-220ENST00000514497 STRN4Q9NRL3 753 aa22.47■■□□□ 1.19
SNCAIP-220ENST00000514497 USP35Q9P2H5 1018 aa22.46■■□□□ 1.19
SNCAIP-220ENST00000514497 CCER2I3L3R5 266 aa22.45■■□□□ 1.18
SNCAIP-220ENST00000514497 NLRP6P59044 892 aa22.45■■□□□ 1.18
SNCAIP-220ENST00000514497 AATKQ6ZMQ8 1374 aa22.45■■□□□ 1.18
SNCAIP-220ENST00000514497 CASZ1Q86V15 1759 aa22.45■■□□□ 1.18
SNCAIP-220ENST00000514497 MIER1Q8N108 512 aa22.44■■□□□ 1.18
SNCAIP-220ENST00000514497 MAP2P11137 1827 aaKnown RBP22.43■■□□□ 1.18
SNCAIP-220ENST00000514497 KCNH5Q8NCM2 988 aa22.42■■□□□ 1.18
SNCAIP-220ENST00000514497 CHRNA2Q15822 529 aa22.41■■□□□ 1.18
SNCAIP-220ENST00000514497 SLIT3O75094 1523 aa22.41■■□□□ 1.18
SNCAIP-220ENST00000514497 KIAA0232Q92628 1395 aa22.4■■□□□ 1.18
SNCAIP-220ENST00000514497 USP19O94966 1318 aa22.4■■□□□ 1.18
SNCAIP-220ENST00000514497 PPP2R1AP30153 589 aa22.4■■□□□ 1.18
SNCAIP-220ENST00000514497 BARGINQ6ZT62 677 aa22.4■■□□□ 1.18
SNCAIP-220ENST00000514497 RGPD3A6NKT7 1758 aaPredicted RBP22.39■■□□□ 1.17
SNCAIP-220ENST00000514497 RGPD4Q7Z3J3 1758 aa22.39■■□□□ 1.17
SNCAIP-220ENST00000514497 CNGB1Q14028 1251 aaPredicted RBP22.38■■□□□ 1.17
SNCAIP-220ENST00000514497 KIF24Q5T7B8 1368 aa22.38■■□□□ 1.17
SNCAIP-220ENST00000514497 ZBTB7AO95365 584 aa22.37■■□□□ 1.17
SNCAIP-220ENST00000514497 PHRF1Q9P1Y6 1649 aaKnown RBP22.36■■□□□ 1.17
SNCAIP-220ENST00000514497 EVA1CP58658 441 aa22.36■■□□□ 1.17
SNCAIP-220ENST00000514497 PDGFDQ9GZP0 370 aaPredicted RBP22.36■■□□□ 1.17
SNCAIP-220ENST00000514497 SMG6Q86US8 1419 aaKnown RBP22.35■■□□□ 1.17
SNCAIP-220ENST00000514497 ANO8Q9HCE9 1232 aaPredicted RBP22.35■■□□□ 1.17
SNCAIP-220ENST00000514497 PTGER2P43116 358 aa22.34■■□□□ 1.17
SNCAIP-220ENST00000514497 SYT17Q9BSW7 474 aa22.34■■□□□ 1.17
SNCAIP-220ENST00000514497 NFAT5O94916 1531 aa22.33■■□□□ 1.17
SNCAIP-220ENST00000514497 GCP02774 474 aa22.33■■□□□ 1.17
SNCAIP-220ENST00000514497 TNNT2P45379 298 aaPredicted RBP22.33■■□□□ 1.17
SNCAIP-220ENST00000514497 ZC3H6P61129 1189 aaKnown RBP22.33■■□□□ 1.17
SNCAIP-220ENST00000514497 NUTM2GQ5VZR2 741 aa22.33■■□□□ 1.17
SNCAIP-220ENST00000514497 FHDC1Q9C0D6 1143 aaPredicted RBP22.33■■□□□ 1.17
SNCAIP-220ENST00000514497 ATF5Q9Y2D1 282 aaPredicted RBP22.33■■□□□ 1.17
SNCAIP-220ENST00000514497 INSRP06213 1382 aa22.33■■□□□ 1.17
SNCAIP-220ENST00000514497 SBF2Q86WG5 1849 aa22.33■■□□□ 1.16
SNCAIP-220ENST00000514497 PARP4Q9UKK3 1724 aaKnown RBP22.32■■□□□ 1.16
SNCAIP-220ENST00000514497 MTHFSP49914 203 aa22.32■■□□□ 1.16
SNCAIP-220ENST00000514497 TCP11L2Q8N4U5 519 aa22.32■■□□□ 1.16
SNCAIP-220ENST00000514497 CFAP53Q96M91 514 aa22.32■■□□□ 1.16
SNCAIP-220ENST00000514497 POLKQ9UBT6 870 aa22.32■■□□□ 1.16
SNCAIP-220ENST00000514497 CEP350Q5VT06 3117 aa22.32■■□□□ 1.16
SNCAIP-220ENST00000514497 LTN1O94822 1766 aa22.31■■□□□ 1.16
SNCAIP-220ENST00000514497 PLSCR1O15162 318 aa22.31■■□□□ 1.16
SNCAIP-220ENST00000514497 GIGYF1O75420 1035 aaPredicted RBP22.31■■□□□ 1.16
SNCAIP-220ENST00000514497 LARP1Q6PKG0 1096 aaKnown RBP22.3■■□□□ 1.16
SNCAIP-220ENST00000514497 BCL11BQ9C0K0 894 aaPredicted RBP22.3■■□□□ 1.16
SNCAIP-220ENST00000514497 RTL1A6NKG5 1358 aa22.29■■□□□ 1.16
SNCAIP-220ENST00000514497 ABCC6O95255 1503 aa22.29■■□□□ 1.16
SNCAIP-220ENST00000514497 MRS2Q9HD23 443 aa22.28■■□□□ 1.16
SNCAIP-220ENST00000514497 PEAK1Q9H792 1746 aa22.28■■□□□ 1.16
SNCAIP-220ENST00000514497 CPDO75976 1380 aa22.27■■□□□ 1.16
SNCAIP-220ENST00000514497 OVOS2A0A0G2JMS6 1433 aa22.27■■□□□ 1.16
SNCAIP-220ENST00000514497 ARHGEF25Q86VW2 580 aa22.26■■□□□ 1.15
SNCAIP-220ENST00000514497 THRAP3Q9Y2W1 955 aaKnown RBP22.26■■□□□ 1.15
SNCAIP-220ENST00000514497 MAP3K19Q56UN5 1328 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms