RNA–Protein interactions for RNA: ENST00000514133.1

SGCB-203, Transcript of sarcoglycan beta, humanhuman

TSL 5

Gene SGCB, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-203ENST00000514133 SRPK2P78362 688 aaKnown RBP6.54□□□□□ -1.36
SGCB-203ENST00000514133 CDCA8Q53HL2 280 aa6.54□□□□□ -1.36
SGCB-203ENST00000514133 EPS8L1Q8TE68 723 aa6.54□□□□□ -1.36
SGCB-203ENST00000514133 MRGPRX2Q96LB1 330 aa6.54□□□□□ -1.36
SGCB-203ENST00000514133 ALG2Q9H553 416 aa6.54□□□□□ -1.36
SGCB-203ENST00000514133 TFIP11Q9UBB9 837 aaKnown RBP6.54□□□□□ -1.36
SGCB-203ENST00000514133 LCE2BO14633 110 aa6.53□□□□□ -1.36
SGCB-203ENST00000514133 GPR37L1O60883 481 aa6.53□□□□□ -1.36
SGCB-203ENST00000514133 RBM25P49756 843 aaKnown RBP6.53□□□□□ -1.36
SGCB-203ENST00000514133 SEMA3FQ13275 785 aa6.53□□□□□ -1.36
SGCB-203ENST00000514133 EHBP1Q8NDI1 1231 aa6.53□□□□□ -1.36
SGCB-203ENST00000514133 GPKOWQ92917 476 aaPredicted RBP eCLIP6.53□□□□□ -1.36
SGCB-203ENST00000514133 AXIN1O15169 862 aa6.52□□□□□ -1.37
SGCB-203ENST00000514133 F12P00748 615 aaPredicted RBP6.52□□□□□ -1.37
SGCB-203ENST00000514133 SKOR1P84550 965 aa6.52□□□□□ -1.37
SGCB-203ENST00000514133 ZNF787Q6DD87 383 aa6.52□□□□□ -1.37
SGCB-203ENST00000514133 PTCRAQ6ISU1 281 aaPredicted RBP6.52□□□□□ -1.37
SGCB-203ENST00000514133 AAASQ9NRG9 546 aa6.52□□□□□ -1.37
SGCB-203ENST00000514133 SIAH2O43255 324 aa6.51□□□□□ -1.37
SGCB-203ENST00000514133 SH3BP2P78314 561 aa6.51□□□□□ -1.37
SGCB-203ENST00000514133 NR6A1Q15406 480 aa6.51□□□□□ -1.37
SGCB-203ENST00000514133 ZNF511Q8NB15 262 aa6.51□□□□□ -1.37
SGCB-203ENST00000514133 ZNF428Q96B54 188 aa6.51□□□□□ -1.37
SGCB-203ENST00000514133 SMPD1P17405 629 aa6.5□□□□□ -1.37
SGCB-203ENST00000514133 CTHP32929 405 aa6.5□□□□□ -1.37
SGCB-203ENST00000514133 SOX11P35716 441 aa6.5□□□□□ -1.37
SGCB-203ENST00000514133 NBPF14Q5TI25 921 aa6.5□□□□□ -1.37
SGCB-203ENST00000514133 PNMA1Q8ND90 353 aa6.5□□□□□ -1.37
SGCB-203ENST00000514133 UCN2Q96RP3 112 aa6.5□□□□□ -1.37
SGCB-203ENST00000514133 IVNS1ABPQ9Y6Y0 642 aa6.5□□□□□ -1.37
SGCB-203ENST00000514133 BPHLQ86WA6 291 aaPredicted RBP6.49□□□□□ -1.37
SGCB-203ENST00000514133 FAM174AQ8TBP5 190 aa6.49□□□□□ -1.37
SGCB-203ENST00000514133 VRTNQ9H8Y1 702 aa6.49□□□□□ -1.37
SGCB-203ENST00000514133 ZC3H4Q9UPT8 1303 aaKnown RBP6.49□□□□□ -1.37
SGCB-203ENST00000514133 PER1O15534 1290 aaPredicted RBP6.48□□□□□ -1.37
SGCB-203ENST00000514133 TBC1D9Q6ZT07 1266 aa6.48□□□□□ -1.37
SGCB-203ENST00000514133 BAP1Q92560 729 aa6.48□□□□□ -1.37
SGCB-203ENST00000514133 SENP2Q9HC62 589 aa6.48□□□□□ -1.37
SGCB-203ENST00000514133 ATG7O95352 703 aa6.47□□□□□ -1.37
SGCB-203ENST00000514133 EIF4G2P78344 907 aaKnown RBP eCLIP6.47□□□□□ -1.37
SGCB-203ENST00000514133 CCDC27Q2M243 656 aa6.47□□□□□ -1.37
SGCB-203ENST00000514133 KIFC2Q96AC6 838 aa6.47□□□□□ -1.37
SGCB-203ENST00000514133 CDK15Q96Q40 435 aa6.47□□□□□ -1.37
SGCB-203ENST00000514133 MAFBQ9Y5Q3 323 aaPredicted RBP6.47□□□□□ -1.37
SGCB-203ENST00000514133 WASF2Q9Y6W5 498 aa6.47□□□□□ -1.37
SGCB-203ENST00000514133 TMEM88BA6NKF7 163 aa6.46□□□□□ -1.38
SGCB-203ENST00000514133 ALDH1A1P00352 501 aa6.46□□□□□ -1.38
SGCB-203ENST00000514133 J3QL48 77 aa6.45□□□□□ -1.38
SGCB-203ENST00000514133 ATP9BO43861 1147 aa6.45□□□□□ -1.38
SGCB-203ENST00000514133 TRIM52Q96A61 297 aa6.45□□□□□ -1.38
SGCB-203ENST00000514133 CDV3Q9UKY7 258 aaKnown RBP6.45□□□□□ -1.38
SGCB-203ENST00000514133 GPSM3Q9Y4H4 160 aa6.45□□□□□ -1.38
SGCB-203ENST00000514133 E9PSI1 815 aa6.44□□□□□ -1.38
SGCB-203ENST00000514133 NR5A1Q13285 461 aa6.44□□□□□ -1.38
SGCB-203ENST00000514133 PDXDC2PQ6P474 469 aa6.44□□□□□ -1.38
SGCB-203ENST00000514133 SND1Q7KZF4 910 aaKnown RBP eCLIP6.44□□□□□ -1.38
SGCB-203ENST00000514133 TRMT44Q8IYL2 757 aaKnown RBP6.44□□□□□ -1.38
SGCB-203ENST00000514133 MAP4K5Q9Y4K4 846 aa6.44□□□□□ -1.38
SGCB-203ENST00000514133 LINC01559Q495D7 138 aa6.43□□□□□ -1.38
SGCB-203ENST00000514133 SH3RF1Q7Z6J0 888 aa6.43□□□□□ -1.38
SGCB-203ENST00000514133 MAP10Q9P2G4 905 aa6.43□□□□□ -1.38
SGCB-203ENST00000514133 ST8SIA5O15466 376 aa6.42□□□□□ -1.38
SGCB-203ENST00000514133 ADH1CP00326 375 aa6.42□□□□□ -1.38
SGCB-203ENST00000514133 NR1H3Q13133 447 aa6.42□□□□□ -1.38
SGCB-203ENST00000514133 B4GALNT3Q6L9W6 998 aa6.42□□□□□ -1.38
SGCB-203ENST00000514133 HPS1Q92902 700 aa6.42□□□□□ -1.38
SGCB-203ENST00000514133 C1QTNF2Q9BXJ5 285 aa6.42□□□□□ -1.38
SGCB-203ENST00000514133 ATP13A2Q9NQ11 1180 aa6.42□□□□□ -1.38
SGCB-203ENST00000514133 C11orf95C9JLR9 678 aaPredicted RBP6.41□□□□□ -1.38
SGCB-203ENST00000514133 PIK3CDO00329 1044 aa6.41□□□□□ -1.38
SGCB-203ENST00000514133 FBXO45P0C2W1 286 aa6.41□□□□□ -1.38
SGCB-203ENST00000514133 AGERQ15109 404 aa6.41□□□□□ -1.38
SGCB-203ENST00000514133 KANK4Q5T7N3 995 aaPredicted RBP6.41□□□□□ -1.38
SGCB-203ENST00000514133 SH3BP5LQ7L8J4 393 aa6.41□□□□□ -1.38
SGCB-203ENST00000514133 TRIM47Q96LD4 638 aa6.41□□□□□ -1.38
SGCB-203ENST00000514133 ZBBXA8MT70 800 aa6.4□□□□□ -1.38
SGCB-203ENST00000514133 CAPN5O15484 640 aaPredicted RBP6.4□□□□□ -1.38
SGCB-203ENST00000514133 SKIP12755 728 aa6.4□□□□□ -1.38
SGCB-203ENST00000514133 TMEM164Q5U3C3 297 aa6.4□□□□□ -1.38
SGCB-203ENST00000514133 FKBPLQ9UIM3 349 aa6.4□□□□□ -1.38
SGCB-203ENST00000514133 NOVA2Q9UNW9 492 aaKnown RBP6.4□□□□□ -1.38
SGCB-203ENST00000514133 PTK2Q05397 1052 aa6.39□□□□□ -1.39
SGCB-203ENST00000514133 NNTQ13423 1086 aa6.39□□□□□ -1.39
SGCB-203ENST00000514133 ELOAQ14241 798 aaKnown RBP6.39□□□□□ -1.39
SGCB-203ENST00000514133 CCDC125Q86Z20 511 aa6.39□□□□□ -1.39
SGCB-203ENST00000514133 CCER1Q8TC90 406 aaPredicted RBP6.39□□□□□ -1.39
SGCB-203ENST00000514133 STK32AQ8WU08 396 aa6.39□□□□□ -1.39
SGCB-203ENST00000514133 ZNF592Q92610 1267 aa6.39□□□□□ -1.39
SGCB-203ENST00000514133 ZMIZ1Q9ULJ6 1067 aa6.39□□□□□ -1.39
SGCB-203ENST00000514133 AMOTL2Q9Y2J4 779 aa6.39□□□□□ -1.39
SGCB-203ENST00000514133 USP17L3A6NCW0 530 aa6.38□□□□□ -1.39
SGCB-203ENST00000514133 USP17L4A6NCW7 530 aa6.38□□□□□ -1.39
SGCB-203ENST00000514133 USP17L2Q6R6M4 530 aa6.38□□□□□ -1.39
SGCB-203ENST00000514133 USP17L1Q7RTZ2 530 aa6.38□□□□□ -1.39
SGCB-203ENST00000514133 NPAS3Q8IXF0 933 aa6.38□□□□□ -1.39
SGCB-203ENST00000514133 DEPDC4Q8N2C3 294 aa6.38□□□□□ -1.39
SGCB-203ENST00000514133 FOXJ1Q92949 421 aa6.38□□□□□ -1.39
SGCB-203ENST00000514133 GMPR2Q9P2T1 348 aaKnown RBP6.38□□□□□ -1.39
SGCB-203ENST00000514133 GNEQ9Y223 722 aaKnown RBP6.38□□□□□ -1.39
SGCB-203ENST00000514133 SCARF1Q14162 830 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms