RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 NBPF14Q5TI25 921 aa8.23□□□□□ -1.09
CLDND1-228ENST00000513873 PTCRAQ6ISU1 281 aaPredicted RBP8.23□□□□□ -1.09
CLDND1-228ENST00000513873 SHROOM4Q9ULL8 1493 aa8.22□□□□□ -1.09
CLDND1-228ENST00000513873 MRPL14Q6P1L8 145 aaKnown RBP8.22□□□□□ -1.09
CLDND1-228ENST00000513873 SNRKQ9NRH2 765 aa8.22□□□□□ -1.09
CLDND1-228ENST00000513873 RAD21O60216 631 aa8.21□□□□□ -1.1
CLDND1-228ENST00000513873 BAP1Q92560 729 aa8.21□□□□□ -1.1
CLDND1-228ENST00000513873 GPKOWQ92917 476 aaPredicted RBP eCLIP8.21□□□□□ -1.1
CLDND1-228ENST00000513873 PURBQ96QR8 312 aaKnown RBP8.21□□□□□ -1.1
CLDND1-228ENST00000513873 FKBPLQ9UIM3 349 aa8.21□□□□□ -1.1
CLDND1-228ENST00000513873 GTF3C3Q9Y5Q9 886 aa8.21□□□□□ -1.1
CLDND1-228ENST00000513873 SOCS7O14512 581 aa8.2□□□□□ -1.1
CLDND1-228ENST00000513873 SIAH2O43255 324 aa8.2□□□□□ -1.1
CLDND1-228ENST00000513873 MAN1A2O60476 641 aa8.2□□□□□ -1.1
CLDND1-228ENST00000513873 LINC01559Q495D7 138 aa8.2□□□□□ -1.1
CLDND1-228ENST00000513873 HMX1Q9NP08 348 aaPredicted RBP8.2□□□□□ -1.1
CLDND1-228ENST00000513873 NDUFB9Q9Y6M9 179 aa8.2□□□□□ -1.1
CLDND1-228ENST00000513873 WWC1Q8IX03 1113 aa8.19□□□□□ -1.1
CLDND1-228ENST00000513873 ZC3H4Q9UPT8 1303 aaKnown RBP8.19□□□□□ -1.1
CLDND1-228ENST00000513873 CUX2O14529 1486 aa8.19□□□□□ -1.1
CLDND1-228ENST00000513873 UBTFP17480 764 aaKnown RBP8.18□□□□□ -1.1
CLDND1-228ENST00000513873 IRS1P35568 1242 aa8.18□□□□□ -1.1
CLDND1-228ENST00000513873 PTK2Q05397 1052 aa8.18□□□□□ -1.1
CLDND1-228ENST00000513873 MCM6Q14566 821 aa8.18□□□□□ -1.1
CLDND1-228ENST00000513873 KANK3Q6NY19 840 aa8.18□□□□□ -1.1
CLDND1-228ENST00000513873 BPHLQ86WA6 291 aaPredicted RBP8.18□□□□□ -1.1
CLDND1-228ENST00000513873 ZNF511Q8NB15 262 aa8.18□□□□□ -1.1
CLDND1-228ENST00000513873 MTMR14Q8NCE2 650 aa8.18□□□□□ -1.1
CLDND1-228ENST00000513873 EPS8L1Q8TE68 723 aa8.17□□□□□ -1.1
CLDND1-228ENST00000513873 SOBPA7XYQ1 873 aa8.16□□□□□ -1.1
CLDND1-228ENST00000513873 PPFIA3O75145 1194 aa8.16□□□□□ -1.1
CLDND1-228ENST00000513873 MARSP56192 900 aaKnown RBP8.16□□□□□ -1.1
CLDND1-228ENST00000513873 SH3BP2P78314 561 aa8.16□□□□□ -1.1
CLDND1-228ENST00000513873 EIF4G1Q04637 1599 aaKnown RBP8.16□□□□□ -1.1
CLDND1-228ENST00000513873 PDXDC2PQ6P474 469 aa8.16□□□□□ -1.1
CLDND1-228ENST00000513873 SVOPQ8N4V2 548 aa8.16□□□□□ -1.1
CLDND1-228ENST00000513873 MYO15BQ96JP2 1530 aa8.16□□□□□ -1.1
CLDND1-228ENST00000513873 ARHGAP9Q9BRR9 750 aa8.16□□□□□ -1.1
CLDND1-228ENST00000513873 ZBTB33Q86T24 672 aa8.15□□□□□ -1.1
CLDND1-228ENST00000513873 GJD4Q96KN9 370 aaPredicted RBP8.15□□□□□ -1.1
CLDND1-228ENST00000513873 TRIM34Q9BYJ4 488 aa8.15□□□□□ -1.1
CLDND1-228ENST00000513873 ZNF330Q9Y3S2 320 aaPredicted RBP8.15□□□□□ -1.1
CLDND1-228ENST00000513873 GPSM3Q9Y4H4 160 aa8.15□□□□□ -1.1
CLDND1-228ENST00000513873 MAGEB6P1A0A0J9YX57 407 aa8.14□□□□□ -1.11
CLDND1-228ENST00000513873 VARSP26640 1264 aaKnown RBP8.14□□□□□ -1.11
CLDND1-228ENST00000513873 FAM174AQ8TBP5 190 aa8.14□□□□□ -1.11
CLDND1-228ENST00000513873 CNTNAP3BQ96NU0 1288 aa8.14□□□□□ -1.11
CLDND1-228ENST00000513873 CNTNAP3Q9BZ76 1288 aa8.14□□□□□ -1.11
CLDND1-228ENST00000513873 ABL2P42684 1182 aa8.13□□□□□ -1.11
CLDND1-228ENST00000513873 NNTQ13423 1086 aa8.13□□□□□ -1.11
CLDND1-228ENST00000513873 SCARF2Q96GP6 870 aaPredicted RBP8.13□□□□□ -1.11
CLDND1-228ENST00000513873 CARD14Q9BXL6 1004 aa8.13□□□□□ -1.11
CLDND1-228ENST00000513873 UPP2O95045 317 aa8.12□□□□□ -1.11
CLDND1-228ENST00000513873 ADH1CP00326 375 aa8.12□□□□□ -1.11
CLDND1-228ENST00000513873 WDR4P57081 412 aaKnown RBP8.12□□□□□ -1.11
CLDND1-228ENST00000513873 ZNF592Q92610 1267 aa8.12□□□□□ -1.11
CLDND1-228ENST00000513873 FOXJ1Q92949 421 aa8.12□□□□□ -1.11
CLDND1-228ENST00000513873 GDPD2Q9HCC8 539 aa8.12□□□□□ -1.11
CLDND1-228ENST00000513873 TBC1D2BQ9UPU7 963 aa8.12□□□□□ -1.11
CLDND1-228ENST00000513873 ZBBXA8MT70 800 aa8.11□□□□□ -1.11
CLDND1-228ENST00000513873 KRTAP4-8Q9BYQ9 185 aa8.11□□□□□ -1.11
CLDND1-228ENST00000513873 ADAM23O75077 832 aa8.1□□□□□ -1.11
CLDND1-228ENST00000513873 ARID5BQ14865 1188 aa8.1□□□□□ -1.11
CLDND1-228ENST00000513873 WASHC4Q2M389 1173 aa8.1□□□□□ -1.11
CLDND1-228ENST00000513873 SH3BP5LQ7L8J4 393 aa8.1□□□□□ -1.11
CLDND1-228ENST00000513873 MSTNO14793 375 aa8.09□□□□□ -1.11
CLDND1-228ENST00000513873 ERICH6Q7L0X2 663 aa8.09□□□□□ -1.11
CLDND1-228ENST00000513873 DZIP3Q86Y13 1208 aaKnown RBP8.09□□□□□ -1.11
CLDND1-228ENST00000513873 SLC10A4Q96EP9 437 aa8.09□□□□□ -1.11
CLDND1-228ENST00000513873 COG6Q9Y2V7 657 aa8.09□□□□□ -1.11
CLDND1-228ENST00000513873 TIMP2P16035 220 aa8.08□□□□□ -1.12
CLDND1-228ENST00000513873 NR1H3Q13133 447 aa8.08□□□□□ -1.12
CLDND1-228ENST00000513873 C6orf118Q5T5N4 469 aa8.08□□□□□ -1.12
CLDND1-228ENST00000513873 CDV3Q9UKY7 258 aaKnown RBP8.08□□□□□ -1.12
CLDND1-228ENST00000513873 TLL2Q9Y6L7 1015 aa8.08□□□□□ -1.12
CLDND1-228ENST00000513873 MCCD1P59942 119 aaPredicted RBP8.07□□□□□ -1.12
CLDND1-228ENST00000513873 EIF4G2P78344 907 aaKnown RBP eCLIP8.07□□□□□ -1.12
CLDND1-228ENST00000513873 ZNF385CQ66K41 422 aaPredicted RBP8.07□□□□□ -1.12
CLDND1-228ENST00000513873 SH3RF1Q7Z6J0 888 aa8.07□□□□□ -1.12
CLDND1-228ENST00000513873 ADAM32Q8TC27 787 aa8.07□□□□□ -1.12
CLDND1-228ENST00000513873 PSMG3-AS1Q96PY0 264 aa8.07□□□□□ -1.12
CLDND1-228ENST00000513873 VASH1Q7L8A9 365 aaPredicted RBP8.06□□□□□ -1.12
CLDND1-228ENST00000513873 MPNDQ8N594 471 aa8.06□□□□□ -1.12
CLDND1-228ENST00000513873 PCDHB9Q9Y5E1 797 aa8.06□□□□□ -1.12
CLDND1-228ENST00000513873 FBXO45P0C2W1 286 aa8.05□□□□□ -1.12
CLDND1-228ENST00000513873 BMP2P12643 396 aa8.05□□□□□ -1.12
CLDND1-228ENST00000513873 KRT76Q01546 638 aa8.05□□□□□ -1.12
CLDND1-228ENST00000513873 ERFEQ4G0M1 354 aa8.05□□□□□ -1.12
CLDND1-228ENST00000513873 C14orf37Q86TY3 774 aa8.05□□□□□ -1.12
CLDND1-228ENST00000513873 COL25A1Q9BXS0 654 aaPredicted RBP8.05□□□□□ -1.12
CLDND1-228ENST00000513873 NBPF20Q3BBV1 942 aa8.04□□□□□ -1.12
CLDND1-228ENST00000513873 C4orf48Q5BLP8 95 aa8.04□□□□□ -1.12
CLDND1-228ENST00000513873 TRMT44Q8IYL2 757 aaKnown RBP8.04□□□□□ -1.12
CLDND1-228ENST00000513873 TRIM52Q96A61 297 aa8.04□□□□□ -1.12
CLDND1-228ENST00000513873 POM121Q96HA1 1249 aa8.04□□□□□ -1.12
CLDND1-228ENST00000513873 VAC14Q08AM6 782 aa8.03□□□□□ -1.12
CLDND1-228ENST00000513873 SEMA3FQ13275 785 aa8.03□□□□□ -1.12
CLDND1-228ENST00000513873 PROSER2Q86WR7 435 aaPredicted RBP8.03□□□□□ -1.12
CLDND1-228ENST00000513873 GALNT6Q8NCL4 622 aa8.03□□□□□ -1.12
CLDND1-228ENST00000513873 CLUAP1Q96AJ1 413 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms