RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 SOX12O15370 315 aa10.23□□□□□ -0.77
HTT-212ENST00000513639 TMF1P82094 1093 aa10.23□□□□□ -0.77
HTT-212ENST00000513639 DDB1Q16531 1140 aa10.23□□□□□ -0.77
HTT-212ENST00000513639 CARD10Q9BWT7 1032 aa10.23□□□□□ -0.77
HTT-212ENST00000513639 ABCA3Q99758 1704 aa10.23□□□□□ -0.77
HTT-212ENST00000513639 WDR17Q8IZU2 1322 aa10.23□□□□□ -0.77
HTT-212ENST00000513639 CLSPNQ9HAW4 1339 aa10.23□□□□□ -0.77
HTT-212ENST00000513639 CRB1P82279 1406 aa10.23□□□□□ -0.77
HTT-212ENST00000513639 EXOC5O00471 708 aa10.22□□□□□ -0.77
HTT-212ENST00000513639 TESK2Q96S53 571 aa10.22□□□□□ -0.77
HTT-212ENST00000513639 PCGF6Q9BYE7 350 aa10.22□□□□□ -0.77
HTT-212ENST00000513639 USP31Q70CQ4 1352 aa10.22□□□□□ -0.77
HTT-212ENST00000513639 NINLQ9Y2I6 1382 aa10.22□□□□□ -0.77
HTT-212ENST00000513639 ZBTB22O15209 634 aa10.21□□□□□ -0.77
HTT-212ENST00000513639 NBPF14Q5TI25 921 aa10.21□□□□□ -0.77
HTT-212ENST00000513639 CAMKK2Q96RR4 588 aa10.21□□□□□ -0.77
HTT-212ENST00000513639 FOXD4L1Q9NU39 408 aa10.21□□□□□ -0.77
HTT-212ENST00000513639 COL5A2P05997 1499 aaPredicted RBP10.2□□□□□ -0.78
HTT-212ENST00000513639 BRWD3Q6RI45 1802 aa10.2□□□□□ -0.78
HTT-212ENST00000513639 NRAPQ86VF7 1730 aa10.2□□□□□ -0.78
HTT-212ENST00000513639 NME9Q86XW9 330 aa10.2□□□□□ -0.78
HTT-212ENST00000513639 PARD3Q8TEW0 1356 aa10.2□□□□□ -0.78
HTT-212ENST00000513639 EDC4Q6P2E9 1401 aaKnown RBP10.19□□□□□ -0.78
HTT-212ENST00000513639 EZH2Q15910 746 aaKnown RBP10.19□□□□□ -0.78
HTT-212ENST00000513639 COG3Q96JB2 828 aa10.19□□□□□ -0.78
HTT-212ENST00000513639 NLRP2Q9NX02 1062 aa10.19□□□□□ -0.78
HTT-212ENST00000513639 CRYBG1Q9Y4K1 1723 aa10.19□□□□□ -0.78
HTT-212ENST00000513639 SLIT3O75094 1523 aa10.18□□□□□ -0.78
HTT-212ENST00000513639 PLSCR1O15162 318 aa10.18□□□□□ -0.78
HTT-212ENST00000513639 IP6K1Q92551 441 aa10.18□□□□□ -0.78
HTT-212ENST00000513639 BCL11BQ9C0K0 894 aaPredicted RBP10.18□□□□□ -0.78
HTT-212ENST00000513639 PHRF1Q9P1Y6 1649 aaKnown RBP10.18□□□□□ -0.78
HTT-212ENST00000513639 NRKQ7Z2Y5 1582 aa10.18□□□□□ -0.78
HTT-212ENST00000513639 DISP2A7MBM2 1401 aa10.17□□□□□ -0.78
HTT-212ENST00000513639 CCDC7Q96M83 1385 aa10.17□□□□□ -0.78
HTT-212ENST00000513639 THSD7AQ9UPZ6 1657 aa10.16□□□□□ -0.78
HTT-212ENST00000513639 PSDA5PKW4 1024 aaPredicted RBP10.16□□□□□ -0.78
HTT-212ENST00000513639 R3HDM1Q15032 1099 aaKnown RBP10.16□□□□□ -0.78
HTT-212ENST00000513639 MARCH10Q8NA82 808 aaPredicted RBP10.16□□□□□ -0.78
HTT-212ENST00000513639 ANKRD24Q8TF21 1146 aa10.16□□□□□ -0.78
HTT-212ENST00000513639 LMO7Q8WWI1 1683 aa10.15□□□□□ -0.78
HTT-212ENST00000513639 A0A1W2PP64 1363 aa10.15□□□□□ -0.78
HTT-212ENST00000513639 USP47Q96K76 1375 aa10.15□□□□□ -0.78
HTT-212ENST00000513639 IL2RBP14784 551 aa10.15□□□□□ -0.78
HTT-212ENST00000513639 AMPHP49418 695 aa10.15□□□□□ -0.78
HTT-212ENST00000513639 CD163L1Q9NR16 1453 aa10.15□□□□□ -0.78
HTT-212ENST00000513639 OVOS2A0A0G2JMS6 1433 aa10.15□□□□□ -0.79
HTT-212ENST00000513639 OVOS2A0A0J9YW53 1432 aa10.15□□□□□ -0.79
HTT-212ENST00000513639 OVOS2Q6IE36 1432 aa10.15□□□□□ -0.79
HTT-212ENST00000513639 ERBB3P21860 1342 aa10.14□□□□□ -0.79
HTT-212ENST00000513639 FYB1O15117 783 aa10.14□□□□□ -0.79
HTT-212ENST00000513639 CCER1Q8TC90 406 aaPredicted RBP10.14□□□□□ -0.79
HTT-212ENST00000513639 ANKRD36BQ8N2N9 1353 aa10.14□□□□□ -0.79
HTT-212ENST00000513639 PIK3C2AO00443 1686 aa10.13□□□□□ -0.79
HTT-212ENST00000513639 BCL9O00512 1426 aa10.13□□□□□ -0.79
HTT-212ENST00000513639 LTV1Q96GA3 475 aaPredicted RBP10.12□□□□□ -0.79
HTT-212ENST00000513639 ABCC6O95255 1503 aa10.12□□□□□ -0.79
HTT-212ENST00000513639 AKAP12Q02952 1782 aa10.11□□□□□ -0.79
HTT-212ENST00000513639 RGPD1P0DJD0 1748 aa10.11□□□□□ -0.79
HTT-212ENST00000513639 HOXC9P31274 260 aa10.11□□□□□ -0.79
HTT-212ENST00000513639 GGNBP2Q9H3C7 697 aa10.11□□□□□ -0.79
HTT-212ENST00000513639 NFAT5O94916 1531 aa10.11□□□□□ -0.79
HTT-212ENST00000513639 COL18A1P39060 1754 aa10.11□□□□□ -0.79
HTT-212ENST00000513639 MAP3K19Q56UN5 1328 aa10.1□□□□□ -0.79
HTT-212ENST00000513639 EIF4G2P78344 907 aaKnown RBP eCLIP10.1□□□□□ -0.791e-7■■■■■ 32.2
HTT-212ENST00000513639 DDX54Q8TDD1 881 aaKnown RBP10.1□□□□□ -0.79
HTT-212ENST00000513639 HMGB2P26583 209 aaKnown RBP10.09□□□□□ -0.79
HTT-212ENST00000513639 PROM2Q8N271 834 aa10.09□□□□□ -0.79
HTT-212ENST00000513639 SPON1Q9HCB6 807 aa10.09□□□□□ -0.79
HTT-212ENST00000513639 CGNL1Q0VF96 1302 aa10.08□□□□□ -0.8
HTT-212ENST00000513639 PARP4Q9UKK3 1724 aaKnown RBP10.08□□□□□ -0.8
HTT-212ENST00000513639 KCNQ2O43526 872 aa10.08□□□□□ -0.8
HTT-212ENST00000513639 FBLN1P23142 703 aa10.08□□□□□ -0.8
HTT-212ENST00000513639 RRS1Q15050 365 aaKnown RBP10.08□□□□□ -0.8
HTT-212ENST00000513639 TXNRD1Q16881 649 aa10.08□□□□□ -0.8
HTT-212ENST00000513639 PTF1AQ7RTS3 328 aa10.08□□□□□ -0.8
HTT-212ENST00000513639 ZCRB1Q8TBF4 217 aaKnown RBP10.08□□□□□ -0.8
HTT-212ENST00000513639 RAPGEF4Q8WZA2 1011 aa10.08□□□□□ -0.8
HTT-212ENST00000513639 CARD14Q9BXL6 1004 aa10.08□□□□□ -0.8
HTT-212ENST00000513639 STK32BQ9NY57 414 aa10.08□□□□□ -0.8
HTT-212ENST00000513639 MON2Q7Z3U7 1717 aa10.07□□□□□ -0.8
HTT-212ENST00000513639 KIF24Q5T7B8 1368 aa10.07□□□□□ -0.8
HTT-212ENST00000513639 ACSBG1Q96GR2 724 aa10.07□□□□□ -0.8
HTT-212ENST00000513639 POLR3GLQ9BT43 218 aa10.07□□□□□ -0.8
HTT-212ENST00000513639 RTL1A6NKG5 1358 aa10.06□□□□□ -0.8
HTT-212ENST00000513639 DCAF8L1A6NGE4 600 aa10.06□□□□□ -0.8
HTT-212ENST00000513639 NBPF6Q5VWK0 638 aa10.06□□□□□ -0.8
HTT-212ENST00000513639 NBPF4Q96M43 638 aa10.06□□□□□ -0.8
HTT-212ENST00000513639 PPP1R1BQ9UD71 204 aaPredicted RBP10.06□□□□□ -0.8
HTT-212ENST00000513639 TATP17735 454 aaPredicted RBP10.05□□□□□ -0.8
HTT-212ENST00000513639 SLC15A2Q16348 729 aa10.05□□□□□ -0.8
HTT-212ENST00000513639 HSP90AB2PQ58FF8 381 aa10.05□□□□□ -0.8
HTT-212ENST00000513639 TNS2Q63HR2 1409 aa10.05□□□□□ -0.8
HTT-212ENST00000513639 SMG6Q86US8 1419 aaKnown RBP10.05□□□□□ -0.8
HTT-212ENST00000513639 INSRP06213 1382 aa10.04□□□□□ -0.8
HTT-212ENST00000513639 PPM1GO15355 546 aaPredicted RBP10.04□□□□□ -0.8
HTT-212ENST00000513639 HSPA5P11021 654 aaKnown RBP10.04□□□□□ -0.8
HTT-212ENST00000513639 PRIM1P49642 420 aaKnown RBP10.04□□□□□ -0.8
HTT-212ENST00000513639 SLC27A3Q5K4L6 730 aa10.04□□□□□ -0.8
HTT-212ENST00000513639 SYTL4Q96C24 671 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms