RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 NBPF20Q3BBV1 942 aa12.77□□□□□ -0.37
TRAPPC11-210ENST00000513600 PCDHB9Q9Y5E1 797 aa12.76□□□□□ -0.37
TRAPPC11-210ENST00000513600 NR3C2P08235 984 aa12.75□□□□□ -0.37
TRAPPC11-210ENST00000513600 ABL2P42684 1182 aa12.75□□□□□ -0.37
TRAPPC11-210ENST00000513600 COG6Q9Y2V7 657 aa12.75□□□□□ -0.37
TRAPPC11-210ENST00000513600 CAPN5O15484 640 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC11-210ENST00000513600 WDR4P57081 412 aaKnown RBP12.74□□□□□ -0.37
TRAPPC11-210ENST00000513600 IRF5Q13568 498 aa12.74□□□□□ -0.37
TRAPPC11-210ENST00000513600 RAD21O60216 631 aa12.73□□□□□ -0.37
TRAPPC11-210ENST00000513600 UBTFP17480 764 aaKnown RBP12.73□□□□□ -0.37
TRAPPC11-210ENST00000513600 CCDC116Q8IYX3 515 aa12.73□□□□□ -0.37
TRAPPC11-210ENST00000513600 KLF16Q9BXK1 252 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC11-210ENST00000513600 DHX9Q08211 1270 aaKnown RBP12.72□□□□□ -0.37
TRAPPC11-210ENST00000513600 EMILIN1Q9Y6C2 1016 aa12.72□□□□□ -0.37
TRAPPC11-210ENST00000513600 TIMP2P16035 220 aa12.71□□□□□ -0.37
TRAPPC11-210ENST00000513600 WASHC4Q2M389 1173 aa12.71□□□□□ -0.37
TRAPPC11-210ENST00000513600 INTS6LQ5JSJ4 861 aaKnown RBP12.7□□□□□ -0.38
TRAPPC11-210ENST00000513600 WWC1Q8IX03 1113 aa12.7□□□□□ -0.38
TRAPPC11-210ENST00000513600 ESPNB1AK53 854 aa12.69□□□□□ -0.38
TRAPPC11-210ENST00000513600 ZIC2O95409 532 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC11-210ENST00000513600 EIF4G2P78344 907 aaKnown RBP eCLIP12.69□□□□□ -0.38
TRAPPC11-210ENST00000513600 SEPT12Q8IYM1 358 aa12.69□□□□□ -0.38
TRAPPC11-210ENST00000513600 PPP1R26Q5T8A7 1209 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC11-210ENST00000513600 ITPKCQ96DU7 683 aa12.68□□□□□ -0.38
TRAPPC11-210ENST00000513600 PGPEP1Q9NXJ5 209 aa12.68□□□□□ -0.38
TRAPPC11-210ENST00000513600 DACH1Q9UI36 760 aa12.68□□□□□ -0.38
TRAPPC11-210ENST00000513600 CCDC125Q86Z20 511 aa12.67□□□□□ -0.38
TRAPPC11-210ENST00000513600 POM121Q96HA1 1249 aa12.67□□□□□ -0.38
TRAPPC11-210ENST00000513600 ATP13A2Q9NQ11 1180 aa12.67□□□□□ -0.38
TRAPPC11-210ENST00000513600 VAC14Q08AM6 782 aa12.66□□□□□ -0.38
TRAPPC11-210ENST00000513600 TRIM52Q96A61 297 aa12.66□□□□□ -0.38
TRAPPC11-210ENST00000513600 ZFAND3Q9H8U3 227 aa12.66□□□□□ -0.38
TRAPPC11-210ENST00000513600 GIGYF1O75420 1035 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC11-210ENST00000513600 RNF20Q5VTR2 975 aa12.65□□□□□ -0.38
TRAPPC11-210ENST00000513600 RAB15P59190 212 aa12.64□□□□□ -0.39
TRAPPC11-210ENST00000513600 SOX11P35716 441 aa12.62□□□□□ -0.39
TRAPPC11-210ENST00000513600 ZNF787Q6DD87 383 aa12.62□□□□□ -0.39
TRAPPC11-210ENST00000513600 SENP2Q9HC62 589 aa12.62□□□□□ -0.39
TRAPPC11-210ENST00000513600 ERVH48-1M5A8F1 160 aa12.61□□□□□ -0.39
TRAPPC11-210ENST00000513600 CEP126Q9P2H0 1117 aa12.61□□□□□ -0.39
TRAPPC11-210ENST00000513600 GMPR2Q9P2T1 348 aaKnown RBP12.61□□□□□ -0.39
TRAPPC11-210ENST00000513600 MRPL14Q6P1L8 145 aaKnown RBP12.6□□□□□ -0.39
TRAPPC11-210ENST00000513600 TRIM46Q7Z4K8 759 aa12.6□□□□□ -0.39
TRAPPC11-210ENST00000513600 BMP1P13497 986 aa12.59□□□□□ -0.39
TRAPPC11-210ENST00000513600 MEIOBQ8N635 442 aa12.59□□□□□ -0.39
TRAPPC11-210ENST00000513600 TMPRSS4Q9NRS4 437 aa12.59□□□□□ -0.39
TRAPPC11-210ENST00000513600 SEMA3FQ13275 785 aa12.58□□□□□ -0.4
TRAPPC11-210ENST00000513600 SCARF1Q14162 830 aa12.58□□□□□ -0.4
TRAPPC11-210ENST00000513600 Q6ZVU0 165 aa12.58□□□□□ -0.4
TRAPPC11-210ENST00000513600 KIFC2Q96AC6 838 aa12.58□□□□□ -0.4
TRAPPC11-210ENST00000513600 POTECB2RU33 542 aa12.57□□□□□ -0.4
TRAPPC11-210ENST00000513600 UPP2O95045 317 aa12.57□□□□□ -0.4
TRAPPC11-210ENST00000513600 ZNF784Q8NCA9 323 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC11-210ENST00000513600 CLUAP1Q96AJ1 413 aa12.56□□□□□ -0.4
TRAPPC11-210ENST00000513600 TRIM47Q96LD4 638 aa12.56□□□□□ -0.4
TRAPPC11-210ENST00000513600 C11orf95C9JLR9 678 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC11-210ENST00000513600 CBLBQ13191 982 aa12.55□□□□□ -0.4
TRAPPC11-210ENST00000513600 TSEN34Q9BSV6 310 aaKnown RBP12.55□□□□□ -0.4
TRAPPC11-210ENST00000513600 A6NJR5 290 aa12.54□□□□□ -0.4
TRAPPC11-210ENST00000513600 SLFNL1Q499Z3 407 aa12.54□□□□□ -0.4
TRAPPC11-210ENST00000513600 PROSER2Q86WR7 435 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC11-210ENST00000513600 LINC00528Q8N1L1 170 aa12.54□□□□□ -0.4
TRAPPC11-210ENST00000513600 ZFP42Q96MM3 310 aa12.54□□□□□ -0.4
TRAPPC11-210ENST00000513600 LILRA1O75019 489 aa12.53□□□□□ -0.4
TRAPPC11-210ENST00000513600 PURBQ96QR8 312 aaKnown RBP12.53□□□□□ -0.4
TRAPPC11-210ENST00000513600 GTF3C3Q9Y5Q9 886 aa12.53□□□□□ -0.4
TRAPPC11-210ENST00000513600 PHTF2Q8N3S3 785 aa12.52□□□□□ -0.41
TRAPPC11-210ENST00000513600 PCDHB11Q9Y5F2 797 aa12.52□□□□□ -0.41
TRAPPC11-210ENST00000513600 BMP2P12643 396 aa12.51□□□□□ -0.41
TRAPPC11-210ENST00000513600 CYLDQ9NQC7 956 aa12.51□□□□□ -0.41
TRAPPC11-210ENST00000513600 ERVK-9P63128 1117 aa12.5□□□□□ -0.41
TRAPPC11-210ENST00000513600 C6orf118Q5T5N4 469 aa12.5□□□□□ -0.41
TRAPPC11-210ENST00000513600 CC2D2BQ6DHV5 1058 aa12.5□□□□□ -0.41
TRAPPC11-210ENST00000513600 RNF135Q8IUD6 432 aa12.5□□□□□ -0.41
TRAPPC11-210ENST00000513600 FNBP4Q8N3X1 1017 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC11-210ENST00000513600 ALG2Q9H553 416 aa12.5□□□□□ -0.41
TRAPPC11-210ENST00000513600 ADH1AP07327 375 aa12.49□□□□□ -0.41
TRAPPC11-210ENST00000513600 ADD1P35611 737 aaKnown RBP12.49□□□□□ -0.41
TRAPPC11-210ENST00000513600 CCDC85AQ96PX6 553 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC11-210ENST00000513600 ESF1Q9H501 851 aaKnown RBP12.49□□□□□ -0.41
TRAPPC11-210ENST00000513600 SNRPBP14678 240 aaKnown RBP12.48□□□□□ -0.41
TRAPPC11-210ENST00000513600 POM121CA8CG34 1229 aa12.47□□□□□ -0.41
TRAPPC11-210ENST00000513600 AGBL1Q96MI9 1066 aa12.47□□□□□ -0.41
TRAPPC11-210ENST00000513600 DOLKQ9UPQ8 538 aa12.47□□□□□ -0.41
TRAPPC11-210ENST00000513600 CHIC2Q9UKJ5 165 aa12.46□□□□□ -0.41
TRAPPC11-210ENST00000513600 SPINT1O43278 529 aa12.45□□□□□ -0.42
TRAPPC11-210ENST00000513600 RELBQ01201 579 aa12.45□□□□□ -0.42
TRAPPC11-210ENST00000513600 MAP7D1Q3KQU3 841 aa12.45□□□□□ -0.42
TRAPPC11-210ENST00000513600 MYCP01106 439 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC11-210ENST00000513600 PTGIRP43119 386 aa12.44□□□□□ -0.42
TRAPPC11-210ENST00000513600 SCTRP47872 440 aa12.44□□□□□ -0.42
TRAPPC11-210ENST00000513600 HDGFL1Q5TGJ6 251 aa12.44□□□□□ -0.42
TRAPPC11-210ENST00000513600 ATP5J2-PTCD1G3V325 749 aa12.43□□□□□ -0.42
TRAPPC11-210ENST00000513600 USP4Q13107 963 aa12.43□□□□□ -0.42
TRAPPC11-210ENST00000513600 TSGA10IPQ3SY00 556 aa12.43□□□□□ -0.42
TRAPPC11-210ENST00000513600 CYP2U1Q7Z449 544 aa12.43□□□□□ -0.42
TRAPPC11-210ENST00000513600 CDCA7Q9BWT1 371 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC11-210ENST00000513600 SOS2Q07890 1332 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC11-210ENST00000513600 KDF1Q8NAX2 398 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC11-210ENST00000513600 PLPP7Q8NBV4 271 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms