RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 USP6P35125 1406 aa14.04□□□□□ -0.16
CCL28-203ENST00000513525 KIAA0232Q92628 1395 aa14.04□□□□□ -0.16
CCL28-203ENST00000513525 USP19O94966 1318 aa14.04□□□□□ -0.16
CCL28-203ENST00000513525 EVC2Q86UK5 1308 aa14.04□□□□□ -0.16
CCL28-203ENST00000513525 PRDM11Q9NQV5 511 aa14.04□□□□□ -0.16
CCL28-203ENST00000513525 BLMP54132 1417 aaPredicted RBP14.03□□□□□ -0.16
CCL28-203ENST00000513525 SBNO2Q9Y2G9 1366 aa14.03□□□□□ -0.16
CCL28-203ENST00000513525 SLIT3O75094 1523 aa14.03□□□□□ -0.16
CCL28-203ENST00000513525 SPATA31A5Q5VU36 1347 aa14.02□□□□□ -0.16
CCL28-203ENST00000513525 SPATA31A7Q8IWB4 1347 aa14.02□□□□□ -0.16
CCL28-203ENST00000513525 ABTB2Q8N961 1025 aa14.02□□□□□ -0.16
CCL28-203ENST00000513525 USP54Q70EL1 1684 aa14.02□□□□□ -0.17
CCL28-203ENST00000513525 SSH2Q76I76 1423 aa14.02□□□□□ -0.17
CCL28-203ENST00000513525 COL18A1P39060 1754 aa14.02□□□□□ -0.17
CCL28-203ENST00000513525 RGPD5Q99666 1765 aa14.02□□□□□ -0.17
CCL28-203ENST00000513525 CPDO75976 1380 aa14.02□□□□□ -0.17
CCL28-203ENST00000513525 CLSPNQ9HAW4 1339 aa14.01□□□□□ -0.17
CCL28-203ENST00000513525 CAMTA1Q9Y6Y1 1673 aa14.01□□□□□ -0.17
CCL28-203ENST00000513525 WNK3Q9BYP7 1800 aa14.01□□□□□ -0.17
CCL28-203ENST00000513525 TNS1Q9HBL0 1735 aaKnown RBP14.01□□□□□ -0.17
CCL28-203ENST00000513525 NUTM2GQ5VZR2 741 aa14□□□□□ -0.17
CCL28-203ENST00000513525 KRT27Q7Z3Y8 459 aa14□□□□□ -0.17
CCL28-203ENST00000513525 NLRP13Q86W25 1043 aa14□□□□□ -0.17
CCL28-203ENST00000513525 CABP1Q9NZU7 370 aa14□□□□□ -0.17
CCL28-203ENST00000513525 TONSLQ96HA7 1378 aa14□□□□□ -0.17
CCL28-203ENST00000513525 PARP4Q9UKK3 1724 aaKnown RBP14□□□□□ -0.17
CCL28-203ENST00000513525 ZC3H6P61129 1189 aaKnown RBP14□□□□□ -0.17
CCL28-203ENST00000513525 FAM98CQ17RN3 349 aaKnown RBP14□□□□□ -0.17
CCL28-203ENST00000513525 SPATA31A1Q5TZJ5 1347 aa13.98□□□□□ -0.17
CCL28-203ENST00000513525 CPSF1Q10570 1443 aaKnown RBP13.98□□□□□ -0.17
CCL28-203ENST00000513525 CHRNA2Q15822 529 aa13.98□□□□□ -0.17
CCL28-203ENST00000513525 OTUD5Q96G74 571 aa13.97□□□□□ -0.17
CCL28-203ENST00000513525 COL5A2P05997 1499 aaPredicted RBP13.96□□□□□ -0.17
CCL28-203ENST00000513525 GCP02774 474 aa13.96□□□□□ -0.17
CCL28-203ENST00000513525 CARD11Q9BXL7 1154 aa13.96□□□□□ -0.17
CCL28-203ENST00000513525 LTN1O94822 1766 aa13.96□□□□□ -0.18
CCL28-203ENST00000513525 A0A0G2JS52 829 aa13.95□□□□□ -0.18
CCL28-203ENST00000513525 MYT1Q01538 1121 aa13.95□□□□□ -0.18
CCL28-203ENST00000513525 SBF2Q86WG5 1849 aa13.94□□□□□ -0.18
CCL28-203ENST00000513525 ABCC6O95255 1503 aa13.94□□□□□ -0.18
CCL28-203ENST00000513525 NLRP6P59044 892 aa13.94□□□□□ -0.18
CCL28-203ENST00000513525 SF3B2Q13435 895 aaKnown RBP13.94□□□□□ -0.18
CCL28-203ENST00000513525 PHF12Q96QT6 1004 aa13.94□□□□□ -0.18
CCL28-203ENST00000513525 STRN4Q9NRL3 753 aa13.94□□□□□ -0.18
CCL28-203ENST00000513525 TTC21BQ7Z4L5 1316 aa13.93□□□□□ -0.18
CCL28-203ENST00000513525 TTC21AQ8NDW8 1320 aa13.93□□□□□ -0.18
CCL28-203ENST00000513525 NFAT5O94916 1531 aa13.93□□□□□ -0.18
CCL28-203ENST00000513525 SPDYE4A6NLX3 237 aa13.93□□□□□ -0.18
CCL28-203ENST00000513525 BARGINQ6ZT62 677 aa13.93□□□□□ -0.18
CCL28-203ENST00000513525 CD163L1Q9NR16 1453 aa13.93□□□□□ -0.18
CCL28-203ENST00000513525 AATKQ6ZMQ8 1374 aa13.92□□□□□ -0.18
CCL28-203ENST00000513525 KTN1Q86UP2 1357 aaKnown RBP13.92□□□□□ -0.18
CCL28-203ENST00000513525 EVA1CP58658 441 aa13.92□□□□□ -0.18
CCL28-203ENST00000513525 LRRC37A3O60309 1634 aa13.92□□□□□ -0.18
CCL28-203ENST00000513525 DISP2A7MBM2 1401 aa13.91□□□□□ -0.18
CCL28-203ENST00000513525 CRB1P82279 1406 aa13.91□□□□□ -0.18
CCL28-203ENST00000513525 RREB1Q92766 1687 aa13.91□□□□□ -0.18
CCL28-203ENST00000513525 PEAK1Q9H792 1746 aa13.91□□□□□ -0.18
CCL28-203ENST00000513525 SRCAPQ6ZRS2 3230 aa13.91□□□□□ -0.18
CCL28-203ENST00000513525 LARP1Q6PKG0 1096 aaKnown RBP13.9□□□□□ -0.18
CCL28-203ENST00000513525 DEFB132Q7Z7B7 95 aa13.9□□□□□ -0.18
CCL28-203ENST00000513525 THRAP3Q9Y2W1 955 aaKnown RBP13.9□□□□□ -0.18
CCL28-203ENST00000513525 TCP11L2Q8N4U5 519 aa13.9□□□□□ -0.19
CCL28-203ENST00000513525 PUS7Q96PZ0 661 aaKnown RBP13.9□□□□□ -0.19
CCL28-203ENST00000513525 BAG6P46379 1132 aa13.89□□□□□ -0.19
CCL28-203ENST00000513525 KCNH5Q8NCM2 988 aa13.89□□□□□ -0.19
CCL28-203ENST00000513525 RGPD3A6NKT7 1758 aaPredicted RBP13.88□□□□□ -0.19
CCL28-203ENST00000513525 RGPD4Q7Z3J3 1758 aa13.88□□□□□ -0.19
CCL28-203ENST00000513525 FAM182BQ5T319 152 aa13.88□□□□□ -0.19
CCL28-203ENST00000513525 USP35Q9P2H5 1018 aa13.88□□□□□ -0.19
CCL28-203ENST00000513525 USP31Q70CQ4 1352 aa13.88□□□□□ -0.19
CCL28-203ENST00000513525 EDC4Q6P2E9 1401 aaKnown RBP13.88□□□□□ -0.19
CCL28-203ENST00000513525 LRP5O75197 1615 aa13.87□□□□□ -0.19
CCL28-203ENST00000513525 POTEMA6NI47 508 aa13.87□□□□□ -0.19
CCL28-203ENST00000513525 ARHGEF25Q86VW2 580 aa13.87□□□□□ -0.19
CCL28-203ENST00000513525 FAM208AQ9UK61 1670 aaKnown RBP13.87□□□□□ -0.19
CCL28-203ENST00000513525 NUP188Q5SRE5 1749 aa13.87□□□□□ -0.19
CCL28-203ENST00000513525 POTEB2H3BUK9 544 aa13.86□□□□□ -0.19
CCL28-203ENST00000513525 SLC24A1O60721 1099 aa13.86□□□□□ -0.19
CCL28-203ENST00000513525 FAM196AQ6ZSG2 479 aa13.86□□□□□ -0.19
CCL28-203ENST00000513525 TESK2Q96S53 571 aa13.86□□□□□ -0.19
CCL28-203ENST00000513525 NINLQ9Y2I6 1382 aa13.86□□□□□ -0.19
CCL28-203ENST00000513525 A0A1W2PP64 1363 aa13.85□□□□□ -0.19
CCL28-203ENST00000513525 WDR17Q8IZU2 1322 aa13.85□□□□□ -0.19
CCL28-203ENST00000513525 ZBTB7CA1YPR0 619 aa13.85□□□□□ -0.19
CCL28-203ENST00000513525 PDE3BQ13370 1112 aa13.85□□□□□ -0.19
CCL28-203ENST00000513525 HDGFL2Q7Z4V5 671 aaPredicted RBP13.85□□□□□ -0.19
CCL28-203ENST00000513525 AXIN2Q9Y2T1 843 aa13.85□□□□□ -0.19
CCL28-203ENST00000513525 KIF20BQ96Q89 1820 aa13.84□□□□□ -0.19
CCL28-203ENST00000513525 OVOS2A0A0J9YW53 1432 aa13.83□□□□□ -0.2
CCL28-203ENST00000513525 OVOS2Q6IE36 1432 aa13.83□□□□□ -0.2
CCL28-203ENST00000513525 MYOM1P52179 1685 aa13.83□□□□□ -0.2
CCL28-203ENST00000513525 ST20-MTHFSA0A0A6YYL1 179 aa13.83□□□□□ -0.2
CCL28-203ENST00000513525 C11orf95C9JLR9 678 aaPredicted RBP13.83□□□□□ -0.2
CCL28-203ENST00000513525 TMC1Q8TDI8 760 aa13.83□□□□□ -0.2
CCL28-203ENST00000513525 SLC12A5Q9H2X9 1139 aa13.83□□□□□ -0.2
CCL28-203ENST00000513525 TERF2IPQ9NYB0 399 aa13.83□□□□□ -0.2
CCL28-203ENST00000513525 OVOS2A0A0G2JMS6 1433 aa13.82□□□□□ -0.2
CCL28-203ENST00000513525 PARD3Q8TEW0 1356 aa13.82□□□□□ -0.2
CCL28-203ENST00000513525 EN1Q05925 392 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms