RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 MORC1Q86VD1 984 aa22.44■■□□□ 1.18
HMGCL-209ENST00000513148 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.44■■□□□ 1.18
HMGCL-209ENST00000513148 CAMTA1Q9Y6Y1 1673 aa22.43■■□□□ 1.18
HMGCL-209ENST00000513148 AATKQ6ZMQ8 1374 aa22.43■■□□□ 1.18
HMGCL-209ENST00000513148 MAP3K19Q56UN5 1328 aa22.42■■□□□ 1.18
HMGCL-209ENST00000513148 UNC5CLQ8IV45 518 aa22.42■■□□□ 1.18
HMGCL-209ENST00000513148 STRN4Q9NRL3 753 aa22.42■■□□□ 1.18
HMGCL-209ENST00000513148 MAP2P11137 1827 aaKnown RBP22.42■■□□□ 1.18
HMGCL-209ENST00000513148 AXIN2Q9Y2T1 843 aa22.41■■□□□ 1.18
HMGCL-209ENST00000513148 POTEAQ6S8J7 498 aa22.4■■□□□ 1.18
HMGCL-209ENST00000513148 QTRT2Q9H974 415 aaKnown RBP22.4■■□□□ 1.18
HMGCL-209ENST00000513148 COL5A2P05997 1499 aaPredicted RBP22.39■■□□□ 1.17
HMGCL-209ENST00000513148 PPM1GO15355 546 aaPredicted RBP22.39■■□□□ 1.17
HMGCL-209ENST00000513148 AMPHP49418 695 aa22.39■■□□□ 1.17
HMGCL-209ENST00000513148 CCDC9Q9Y3X0 531 aaKnown RBP22.39■■□□□ 1.17
HMGCL-209ENST00000513148 EMILIN1Q9Y6C2 1016 aa22.39■■□□□ 1.17
HMGCL-209ENST00000513148 PEAK1Q9H792 1746 aa22.39■■□□□ 1.17
HMGCL-209ENST00000513148 EVA1CP58658 441 aa22.38■■□□□ 1.17
HMGCL-209ENST00000513148 NPC1L1Q9UHC9 1359 aa22.38■■□□□ 1.17
HMGCL-209ENST00000513148 TRPC5Q9UL62 973 aaPredicted RBP22.38■■□□□ 1.17
HMGCL-209ENST00000513148 ABCC6O95255 1503 aa22.37■■□□□ 1.17
HMGCL-209ENST00000513148 ATRNO75882 1429 aa22.37■■□□□ 1.17
HMGCL-209ENST00000513148 HOXC9P31274 260 aa22.35■■□□□ 1.17
HMGCL-209ENST00000513148 IP6K1Q92551 441 aa22.35■■□□□ 1.17
HMGCL-209ENST00000513148 LARP1Q6PKG0 1096 aaKnown RBP22.34■■□□□ 1.17
HMGCL-209ENST00000513148 LTV1Q96GA3 475 aaPredicted RBP22.34■■□□□ 1.17
HMGCL-209ENST00000513148 POLKQ9UBT6 870 aa22.34■■□□□ 1.17
HMGCL-209ENST00000513148 RTL1A6NKG5 1358 aa22.34■■□□□ 1.17
HMGCL-209ENST00000513148 CSB-PGBD3P0DP91 1061 aa22.33■■□□□ 1.17
HMGCL-209ENST00000513148 USP35Q9P2H5 1018 aa22.33■■□□□ 1.17
HMGCL-209ENST00000513148 VPS72Q15906 364 aa22.33■■□□□ 1.16
HMGCL-209ENST00000513148 FLT4P35916 1363 aa22.33■■□□□ 1.16
HMGCL-209ENST00000513148 BLMP54132 1417 aaPredicted RBP22.33■■□□□ 1.16
HMGCL-209ENST00000513148 GLI3P10071 1580 aa22.32■■□□□ 1.16
HMGCL-209ENST00000513148 ERBB3P21860 1342 aa22.31■■□□□ 1.16
HMGCL-209ENST00000513148 HSP90AB2PQ58FF8 381 aa22.31■■□□□ 1.16
HMGCL-209ENST00000513148 ANKRD24Q8TF21 1146 aa22.31■■□□□ 1.16
HMGCL-209ENST00000513148 GJD4Q96KN9 370 aaPredicted RBP22.31■■□□□ 1.16
HMGCL-209ENST00000513148 WDR17Q8IZU2 1322 aa22.3■■□□□ 1.16
HMGCL-209ENST00000513148 RXRBP28702 533 aa22.3■■□□□ 1.16
HMGCL-209ENST00000513148 TOM1L2Q6ZVM7 507 aa22.3■■□□□ 1.16
HMGCL-209ENST00000513148 RBM6P78332 1123 aaKnown RBP22.29■■□□□ 1.16
HMGCL-209ENST00000513148 CRB1P82279 1406 aa22.29■■□□□ 1.16
HMGCL-209ENST00000513148 KIF24Q5T7B8 1368 aa22.29■■□□□ 1.16
HMGCL-209ENST00000513148 SPATA31A5Q5VU36 1347 aa22.28■■□□□ 1.16
HMGCL-209ENST00000513148 SPATA31A7Q8IWB4 1347 aa22.28■■□□□ 1.16
HMGCL-209ENST00000513148 RGPD2P0DJD1 1756 aa22.28■■□□□ 1.16
HMGCL-209ENST00000513148 SMG6Q86US8 1419 aaKnown RBP22.28■■□□□ 1.16
HMGCL-209ENST00000513148 ANP32EQ9BTT0 268 aa22.27■■□□□ 1.16
HMGCL-209ENST00000513148 INSRP06213 1382 aa22.27■■□□□ 1.16
HMGCL-209ENST00000513148 SPATA31A1Q5TZJ5 1347 aa22.27■■□□□ 1.15
HMGCL-209ENST00000513148 NLRP2Q9NX02 1062 aa22.26■■□□□ 1.15
HMGCL-209ENST00000513148 MTHFSP49914 203 aa22.26■■□□□ 1.15
HMGCL-209ENST00000513148 FAM208AQ9UK61 1670 aaKnown RBP22.26■■□□□ 1.15
HMGCL-209ENST00000513148 FAM98CQ17RN3 349 aaKnown RBP22.25■■□□□ 1.15
HMGCL-209ENST00000513148 PARD3Q8TEW0 1356 aa22.25■■□□□ 1.15
HMGCL-209ENST00000513148 CDK12Q9NYV4 1490 aaPredicted RBP22.25■■□□□ 1.15
HMGCL-209ENST00000513148 A0A0G2JS52 829 aa22.24■■□□□ 1.15
HMGCL-209ENST00000513148 RGS12O14924 1447 aa22.22■■□□□ 1.15
HMGCL-209ENST00000513148 PPP2R1AP30153 589 aa22.22■■□□□ 1.15
HMGCL-209ENST00000513148 MIER1Q8N108 512 aa22.22■■□□□ 1.15
HMGCL-209ENST00000513148 TCP11L2Q8N4U5 519 aa22.22■■□□□ 1.15
HMGCL-209ENST00000513148 CARD10Q9BWT7 1032 aa22.21■■□□□ 1.15
HMGCL-209ENST00000513148 WNK3Q9BYP7 1800 aa22.21■■□□□ 1.15
HMGCL-209ENST00000513148 EIF4A2Q14240 407 aaKnown RBP22.19■■□□□ 1.14
HMGCL-209ENST00000513148 ILDR2Q71H61 639 aa22.19■■□□□ 1.14
HMGCL-209ENST00000513148 USHBP1Q8N6Y0 703 aa22.19■■□□□ 1.14
HMGCL-209ENST00000513148 RALBP1Q15311 655 aa22.18■■□□□ 1.14
HMGCL-209ENST00000513148 NBPF6Q5VWK0 638 aa22.18■■□□□ 1.14
HMGCL-209ENST00000513148 NBPF4Q96M43 638 aa22.18■■□□□ 1.14
HMGCL-209ENST00000513148 THSD7AQ9UPZ6 1657 aa22.18■■□□□ 1.14
HMGCL-209ENST00000513148 THRAP3Q9Y2W1 955 aaKnown RBP22.18■■□□□ 1.14
HMGCL-209ENST00000513148 SEPT12Q8IYM1 358 aa22.17■■□□□ 1.14
HMGCL-209ENST00000513148 BRWD3Q6RI45 1802 aa22.17■■□□□ 1.14
HMGCL-209ENST00000513148 BCL11AQ9H165 835 aa22.16■■□□□ 1.14
HMGCL-209ENST00000513148 BARGINQ6ZT62 677 aa22.16■■□□□ 1.14
HMGCL-209ENST00000513148 YTHDC1Q96MU7 727 aaKnown RBP22.16■■□□□ 1.14
HMGCL-209ENST00000513148 PRKRIP1Q9H875 184 aaPredicted RBP22.16■■□□□ 1.14
HMGCL-209ENST00000513148 EYA1Q99502 592 aa22.14■■□□□ 1.13
HMGCL-209ENST00000513148 COL3A1P02461 1466 aaPredicted RBP22.13■■□□□ 1.13
HMGCL-209ENST00000513148 ONECUT3O60422 494 aaPredicted RBP22.13■■□□□ 1.13
HMGCL-209ENST00000513148 PARP4Q9UKK3 1724 aaKnown RBP22.13■■□□□ 1.13
HMGCL-209ENST00000513148 LRRC37A3O60309 1634 aa22.13■■□□□ 1.13
HMGCL-209ENST00000513148 MYBBP1AQ9BQG0 1328 aaKnown RBP22.13■■□□□ 1.13
HMGCL-209ENST00000513148 CFAP53Q96M91 514 aa22.13■■□□□ 1.13
HMGCL-209ENST00000513148 DIAPH1O60610 1272 aaKnown RBP22.12■■□□□ 1.13
HMGCL-209ENST00000513148 IL13P35225 146 aa22.11■■□□□ 1.13
HMGCL-209ENST00000513148 DISP2A7MBM2 1401 aa22.11■■□□□ 1.13
HMGCL-209ENST00000513148 IL2RBP14784 551 aa22.11■■□□□ 1.13
HMGCL-209ENST00000513148 RGPD1P0DJD0 1748 aa22.11■■□□□ 1.13
HMGCL-209ENST00000513148 MEGF6O75095 1541 aa22.1■■□□□ 1.13
HMGCL-209ENST00000513148 ANP32CO43423 234 aa22.09■■□□□ 1.13
HMGCL-209ENST00000513148 IGSF1Q8N6C5 1336 aa22.09■■□□□ 1.13
HMGCL-209ENST00000513148 EP400Q96L91 3159 aa22.08■■□□□ 1.12
HMGCL-209ENST00000513148 U2SURPO15042 1029 aaKnown RBP22.07■■□□□ 1.12
HMGCL-209ENST00000513148 DDB1Q16531 1140 aa22.07■■□□□ 1.12
HMGCL-209ENST00000513148 RAPGEF4Q8WZA2 1011 aa22.07■■□□□ 1.12
HMGCL-209ENST00000513148 CDCA7Q9BWT1 371 aaPredicted RBP22.07■■□□□ 1.12
HMGCL-209ENST00000513148 SUPT16HQ9Y5B9 1047 aaKnown RBP22.07■■□□□ 1.12
HMGCL-209ENST00000513148 NCAPD2Q15021 1401 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms