RNA–Protein interactions for RNA: ENST00000512959.1

KIT-203, Transcript of KIT proto-oncogene receptor tyrosine kinase, humanhuman

TSL 4

Gene KIT, Length 746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIT-203ENST00000512959 KCTD15Q96SI1 283 aaPredicted RBP11.15□□□□□ -0.62
KIT-203ENST00000512959 PALM3A6NDB9 673 aaPredicted RBP11.14□□□□□ -0.63
KIT-203ENST00000512959 SIAH2O43255 324 aa11.14□□□□□ -0.63
KIT-203ENST00000512959 SKIP12755 728 aa11.14□□□□□ -0.63
KIT-203ENST00000512959 RFX1P22670 979 aa11.14□□□□□ -0.63
KIT-203ENST00000512959 MCCD1P59942 119 aaPredicted RBP11.14□□□□□ -0.63
KIT-203ENST00000512959 TFIP11Q9UBB9 837 aaKnown RBP11.14□□□□□ -0.63
KIT-203ENST00000512959 CFAP70Q5T0N1 1121 aa11.13□□□□□ -0.63
KIT-203ENST00000512959 MAP4K5Q9Y4K4 846 aa11.13□□□□□ -0.63
KIT-203ENST00000512959 ALDH1A1P00352 501 aa11.12□□□□□ -0.63
KIT-203ENST00000512959 INTS6LQ5JSJ4 861 aaKnown RBP11.12□□□□□ -0.63
KIT-203ENST00000512959 CCDC85AQ96PX6 553 aaPredicted RBP11.12□□□□□ -0.63
KIT-203ENST00000512959 CDV3Q9UKY7 258 aaKnown RBP11.12□□□□□ -0.63
KIT-203ENST00000512959 ATP9BO43861 1147 aa11.11□□□□□ -0.63
KIT-203ENST00000512959 LMOD1P29536 600 aaPredicted RBP11.11□□□□□ -0.63
KIT-203ENST00000512959 TSGA10IPQ3SY00 556 aa11.11□□□□□ -0.63
KIT-203ENST00000512959 DEPDC4Q8N2C3 294 aa11.11□□□□□ -0.63
KIT-203ENST00000512959 PLPP7Q8NBV4 271 aa11.11□□□□□ -0.63
KIT-203ENST00000512959 MAFBQ9Y5Q3 323 aaPredicted RBP11.11□□□□□ -0.63
KIT-203ENST00000512959 USP17L5A8MUK1 530 aa11.1□□□□□ -0.63
KIT-203ENST00000512959 ESPNB1AK53 854 aa11.1□□□□□ -0.63
KIT-203ENST00000512959 GDF9O60383 454 aa11.1□□□□□ -0.63
KIT-203ENST00000512959 TRIM67Q6ZTA4 783 aa11.1□□□□□ -0.63
KIT-203ENST00000512959 PHTF2Q8N3S3 785 aa11.1□□□□□ -0.63
KIT-203ENST00000512959 CDK15Q96Q40 435 aa11.1□□□□□ -0.63
KIT-203ENST00000512959 ADH1CP00326 375 aa11.09□□□□□ -0.63
KIT-203ENST00000512959 DOLKQ9UPQ8 538 aa11.09□□□□□ -0.63
KIT-203ENST00000512959 PCDHB11Q9Y5F2 797 aa11.09□□□□□ -0.63
KIT-203ENST00000512959 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.08□□□□□ -0.64
KIT-203ENST00000512959 USP17L3A6NCW0 530 aa11.08□□□□□ -0.64
KIT-203ENST00000512959 USP17L4A6NCW7 530 aa11.08□□□□□ -0.64
KIT-203ENST00000512959 RGS20O76081 388 aa11.08□□□□□ -0.64
KIT-203ENST00000512959 OXLD1Q5BKU9 147 aa11.08□□□□□ -0.64
KIT-203ENST00000512959 USP17L2Q6R6M4 530 aa11.08□□□□□ -0.64
KIT-203ENST00000512959 USP17L1Q7RTZ2 530 aa11.08□□□□□ -0.64
KIT-203ENST00000512959 TTC24A2A3L6 582 aaPredicted RBP11.07□□□□□ -0.64
KIT-203ENST00000512959 NR3C2P08235 984 aa11.07□□□□□ -0.64
KIT-203ENST00000512959 GRM5P41594 1212 aa11.07□□□□□ -0.64
KIT-203ENST00000512959 CYP4X1Q8N118 509 aa11.07□□□□□ -0.64
KIT-203ENST00000512959 NFATC2IPQ8NCF5 419 aa11.07□□□□□ -0.64
KIT-203ENST00000512959 CDCA7Q9BWT1 371 aaPredicted RBP11.07□□□□□ -0.64
KIT-203ENST00000512959 J3QL48 77 aa11.06□□□□□ -0.64
KIT-203ENST00000512959 ERVH48-1M5A8F1 160 aa11.06□□□□□ -0.64
KIT-203ENST00000512959 NCOA4Q13772 614 aa11.06□□□□□ -0.64
KIT-203ENST00000512959 CDCA8Q53HL2 280 aa11.06□□□□□ -0.64
KIT-203ENST00000512959 RNF20Q5VTR2 975 aa11.06□□□□□ -0.64
KIT-203ENST00000512959 SNIP1Q8TAD8 396 aaKnown RBP11.06□□□□□ -0.64
KIT-203ENST00000512959 TMPRSS4Q9NRS4 437 aa11.06□□□□□ -0.64
KIT-203ENST00000512959 WASF2Q9Y6W5 498 aa11.06□□□□□ -0.64
KIT-203ENST00000512959 TRAF7Q6Q0C0 670 aa11.05□□□□□ -0.64
KIT-203ENST00000512959 MPNDQ8N594 471 aa11.05□□□□□ -0.64
KIT-203ENST00000512959 NNTQ13423 1086 aa11.04□□□□□ -0.64
KIT-203ENST00000512959 SEPT12Q8IYM1 358 aa11.04□□□□□ -0.64
KIT-203ENST00000512959 CCDC116Q8IYX3 515 aa11.03□□□□□ -0.64
KIT-203ENST00000512959 CHIC2Q9UKJ5 165 aa11.03□□□□□ -0.64
KIT-203ENST00000512959 SCTRP47872 440 aa11.02□□□□□ -0.65
KIT-203ENST00000512959 PRR20EP86478 221 aa11.02□□□□□ -0.65
KIT-203ENST00000512959 PRR20CP86479 221 aa11.02□□□□□ -0.65
KIT-203ENST00000512959 PRR20DP86480 221 aa11.02□□□□□ -0.65
KIT-203ENST00000512959 PRR20BP86481 221 aa11.02□□□□□ -0.65
KIT-203ENST00000512959 PRR20AP86496 221 aa11.02□□□□□ -0.65
KIT-203ENST00000512959 NR5A1Q13285 461 aa11.02□□□□□ -0.65
KIT-203ENST00000512959 PPP1R26Q5T8A7 1209 aaPredicted RBP11.02□□□□□ -0.65
KIT-203ENST00000512959 CYLDQ9NQC7 956 aa11.02□□□□□ -0.65
KIT-203ENST00000512959 TOR4AQ9NXH8 423 aa11.02□□□□□ -0.65
KIT-203ENST00000512959 EML3Q32P44 896 aa11.01□□□□□ -0.65
KIT-203ENST00000512959 MAP7D1Q3KQU3 841 aa11.01□□□□□ -0.65
KIT-203ENST00000512959 PLEKHM2Q8IWE5 1019 aa11.01□□□□□ -0.65
KIT-203ENST00000512959 ZNF784Q8NCA9 323 aaPredicted RBP11.01□□□□□ -0.65
KIT-203ENST00000512959 PBXIP1Q96AQ6 731 aa11.01□□□□□ -0.65
KIT-203ENST00000512959 PDZRN3Q9UPQ7 1066 aa11.01□□□□□ -0.65
KIT-203ENST00000512959 SMPD1P17405 629 aa11□□□□□ -0.65
KIT-203ENST00000512959 DHX9Q08211 1270 aaKnown RBP10.99□□□□□ -0.65
KIT-203ENST00000512959 MKRN1Q9UHC7 482 aaKnown RBP10.98□□□□□ -0.65
KIT-203ENST00000512959 SRPK2P78362 688 aaKnown RBP10.97□□□□□ -0.65
KIT-203ENST00000512959 KANK4Q5T7N3 995 aaPredicted RBP10.97□□□□□ -0.65
KIT-203ENST00000512959 VRTNQ9H8Y1 702 aa10.97□□□□□ -0.65
KIT-203ENST00000512959 HPS1Q92902 700 aa10.96□□□□□ -0.65
KIT-203ENST00000512959 IRX2Q9BZI1 471 aaPredicted RBP10.96□□□□□ -0.65
KIT-203ENST00000512959 ZFAND3Q9H8U3 227 aa10.96□□□□□ -0.65
KIT-203ENST00000512959 PGPEP1Q9NXJ5 209 aa10.96□□□□□ -0.65
KIT-203ENST00000512959 NOD1Q9Y239 953 aa10.96□□□□□ -0.65
KIT-203ENST00000512959 FAM187AA6NFU0 413 aa10.95□□□□□ -0.66
KIT-203ENST00000512959 MYCP01106 439 aaPredicted RBP10.95□□□□□ -0.66
KIT-203ENST00000512959 WDR4P57081 412 aaKnown RBP10.95□□□□□ -0.66
KIT-203ENST00000512959 ERVK-9P63128 1117 aa10.95□□□□□ -0.66
KIT-203ENST00000512959 CC2D2BQ6DHV5 1058 aa10.95□□□□□ -0.66
KIT-203ENST00000512959 ITPKCQ96DU7 683 aa10.95□□□□□ -0.66
KIT-203ENST00000512959 EMILIN1Q9Y6C2 1016 aa10.95□□□□□ -0.66
KIT-203ENST00000512959 ZIC2O95409 532 aaPredicted RBP10.94□□□□□ -0.66
KIT-203ENST00000512959 GTF2IP78347 998 aa10.94□□□□□ -0.66
KIT-203ENST00000512959 CRTC2Q53ET0 693 aaPredicted RBP10.94□□□□□ -0.66
KIT-203ENST00000512959 CCDC125Q86Z20 511 aa10.94□□□□□ -0.66
KIT-203ENST00000512959 ZNF594Q96JF6 807 aaPredicted RBP10.94□□□□□ -0.66
KIT-203ENST00000512959 USP17L15C9J2P7 530 aa10.93□□□□□ -0.66
KIT-203ENST00000512959 USP17L10C9JJH3 530 aa10.93□□□□□ -0.66
KIT-203ENST00000512959 USP17L13C9JLJ4 530 aa10.93□□□□□ -0.66
KIT-203ENST00000512959 USP17L12C9JPN9 530 aa10.93□□□□□ -0.66
KIT-203ENST00000512959 USP17L11C9JVI0 530 aa10.93□□□□□ -0.66
KIT-203ENST00000512959 USP17L21D6R901 530 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms