RNA–Protein interactions for RNA: ENST00000512606.5

TMEM173-211, Transcript of transmembrane protein 173, humanhuman

TSL 1 (best)

Gene TMEM173, Length 838 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM173-211ENST00000512606 PDGFDQ9GZP0 370 aaPredicted RBP16.91■□□□□ 0.3
TMEM173-211ENST00000512606 PPIP5K1Q6PFW1 1433 aa16.9■□□□□ 0.3
TMEM173-211ENST00000512606 GCP02774 474 aa16.9■□□□□ 0.3
TMEM173-211ENST00000512606 RAB3GAP2Q9H2M9 1393 aa16.89■□□□□ 0.3
TMEM173-211ENST00000512606 USP6P35125 1406 aa16.89■□□□□ 0.29
TMEM173-211ENST00000512606 PTF1AQ7RTS3 328 aa16.89■□□□□ 0.29
TMEM173-211ENST00000512606 BCL11BQ9C0K0 894 aaPredicted RBP16.89■□□□□ 0.29
TMEM173-211ENST00000512606 ABCC6O95255 1503 aa16.89■□□□□ 0.29
TMEM173-211ENST00000512606 BTAF1O14981 1849 aa16.89■□□□□ 0.29
TMEM173-211ENST00000512606 CPSF1Q10570 1443 aaKnown RBP16.88■□□□□ 0.29
TMEM173-211ENST00000512606 NLRP13Q86W25 1043 aa16.88■□□□□ 0.29
TMEM173-211ENST00000512606 PROM2Q8N271 834 aa16.88■□□□□ 0.29
TMEM173-211ENST00000512606 DCAF11Q8TEB1 546 aa16.88■□□□□ 0.29
TMEM173-211ENST00000512606 TUBGCP6Q96RT7 1819 aa16.88■□□□□ 0.29
TMEM173-211ENST00000512606 MAP3K5Q99683 1374 aa16.88■□□□□ 0.29
TMEM173-211ENST00000512606 ZBTB7AO95365 584 aa16.87■□□□□ 0.29
TMEM173-211ENST00000512606 DDB1Q16531 1140 aa16.87■□□□□ 0.29
TMEM173-211ENST00000512606 SGIP1Q9BQI5 828 aa16.87■□□□□ 0.29
TMEM173-211ENST00000512606 KDM2AQ9Y2K7 1162 aa16.87■□□□□ 0.29
TMEM173-211ENST00000512606 USP54Q70EL1 1684 aa16.87■□□□□ 0.29
TMEM173-211ENST00000512606 TNS2Q63HR2 1409 aa16.87■□□□□ 0.29
TMEM173-211ENST00000512606 NFAT5O94916 1531 aa16.86■□□□□ 0.29
TMEM173-211ENST00000512606 WDR17Q8IZU2 1322 aa16.85■□□□□ 0.29
TMEM173-211ENST00000512606 SHANK3Q9BYB0 1731 aa16.84■□□□□ 0.29
TMEM173-211ENST00000512606 MARCH10Q8NA82 808 aaPredicted RBP16.84■□□□□ 0.29
TMEM173-211ENST00000512606 SYT17Q9BSW7 474 aa16.84■□□□□ 0.29
TMEM173-211ENST00000512606 FHDC1Q9C0D6 1143 aaPredicted RBP16.84■□□□□ 0.29
TMEM173-211ENST00000512606 SENP3-EIF4A1A0A087X0R7 540 aa16.83■□□□□ 0.28
TMEM173-211ENST00000512606 MON2Q7Z3U7 1717 aa16.82■□□□□ 0.28
TMEM173-211ENST00000512606 C1QTNF8P60827 252 aa16.82■□□□□ 0.28
TMEM173-211ENST00000512606 SLC15A2Q16348 729 aa16.82■□□□□ 0.28
TMEM173-211ENST00000512606 TXNRD1Q16881 649 aa16.82■□□□□ 0.28
TMEM173-211ENST00000512606 MTFR1LQ9H019 292 aa16.82■□□□□ 0.28
TMEM173-211ENST00000512606 CDCA7Q9BWT1 371 aaPredicted RBP16.81■□□□□ 0.28
TMEM173-211ENST00000512606 STK32BQ9NY57 414 aa16.81■□□□□ 0.28
TMEM173-211ENST00000512606 ATF5Q9Y2D1 282 aaPredicted RBP16.81■□□□□ 0.28
TMEM173-211ENST00000512606 LTN1O94822 1766 aa16.8■□□□□ 0.28
TMEM173-211ENST00000512606 TOM1L2Q6ZVM7 507 aa16.8■□□□□ 0.28
TMEM173-211ENST00000512606 AXIN2Q9Y2T1 843 aa16.78■□□□□ 0.28
TMEM173-211ENST00000512606 KAT6BQ8WYB5 2073 aa16.77■□□□□ 0.28
TMEM173-211ENST00000512606 CARD10Q9BWT7 1032 aa16.77■□□□□ 0.28
TMEM173-211ENST00000512606 CCDC7Q96M83 1385 aa16.77■□□□□ 0.27
TMEM173-211ENST00000512606 LY75O60449 1722 aa16.76■□□□□ 0.27
TMEM173-211ENST00000512606 CENPJQ9HC77 1338 aaPredicted RBP16.76■□□□□ 0.27
TMEM173-211ENST00000512606 ZBTB7CA1YPR0 619 aa16.76■□□□□ 0.27
TMEM173-211ENST00000512606 NLRP6P59044 892 aa16.76■□□□□ 0.27
TMEM173-211ENST00000512606 SRPK2P78362 688 aaKnown RBP16.76■□□□□ 0.27
TMEM173-211ENST00000512606 IFFO2Q5TF58 517 aa16.75■□□□□ 0.27
TMEM173-211ENST00000512606 ARHGEF25Q86VW2 580 aa16.75■□□□□ 0.27
TMEM173-211ENST00000512606 CABP2Q9NPB3 220 aa16.75■□□□□ 0.27
TMEM173-211ENST00000512606 FAM208AQ9UK61 1670 aaKnown RBP16.75■□□□□ 0.27
TMEM173-211ENST00000512606 ARXQ96QS3 562 aa16.74■□□□□ 0.27
TMEM173-211ENST00000512606 DOT1LQ8TEK3 1739 aa16.73■□□□□ 0.27
TMEM173-211ENST00000512606 NBPF1Q3BBV0 1214 aa16.72■□□□□ 0.27
TMEM173-211ENST00000512606 CEP350Q5VT06 3117 aa16.72■□□□□ 0.27
TMEM173-211ENST00000512606 GOLGB1Q14789 3259 aaKnown RBP16.71■□□□□ 0.27
TMEM173-211ENST00000512606 ZNF827Q17R98 1081 aa16.71■□□□□ 0.27
TMEM173-211ENST00000512606 CABP1Q9NZU7 370 aa16.71■□□□□ 0.27
TMEM173-211ENST00000512606 EXOC5O00471 708 aa16.69■□□□□ 0.26
TMEM173-211ENST00000512606 GIGYF1O75420 1035 aaPredicted RBP16.69■□□□□ 0.26
TMEM173-211ENST00000512606 KCNH5Q8NCM2 988 aa16.69■□□□□ 0.26
TMEM173-211ENST00000512606 TTC21BQ7Z4L5 1316 aa16.69■□□□□ 0.26
TMEM173-211ENST00000512606 TTC21AQ8NDW8 1320 aa16.68■□□□□ 0.26
TMEM173-211ENST00000512606 CSB-PGBD3P0DP91 1061 aa16.67■□□□□ 0.26
TMEM173-211ENST00000512606 ERBB3P21860 1342 aa16.67■□□□□ 0.26
TMEM173-211ENST00000512606 AKT1S1Q96B36 256 aa16.65■□□□□ 0.26
TMEM173-211ENST00000512606 ACSBG1Q96GR2 724 aa16.65■□□□□ 0.26
TMEM173-211ENST00000512606 LRRC4BQ9NT99 713 aa16.65■□□□□ 0.26
TMEM173-211ENST00000512606 GPR162Q16538 588 aa16.64■□□□□ 0.25
TMEM173-211ENST00000512606 SLC16A10Q8TF71 515 aa16.64■□□□□ 0.25
TMEM173-211ENST00000512606 USP31Q70CQ4 1352 aa16.64■□□□□ 0.25
TMEM173-211ENST00000512606 PNPLA7Q6ZV29 1317 aa16.63■□□□□ 0.25
TMEM173-211ENST00000512606 TAF1LQ8IZX4 1826 aa16.63■□□□□ 0.25
TMEM173-211ENST00000512606 RGPD2P0DJD1 1756 aa16.62■□□□□ 0.25
TMEM173-211ENST00000512606 ZNF692Q9BU19 519 aaPredicted RBP16.62■□□□□ 0.25
TMEM173-211ENST00000512606 EVC2Q86UK5 1308 aa16.62■□□□□ 0.25
TMEM173-211ENST00000512606 C5P01031 1676 aa16.62■□□□□ 0.25
TMEM173-211ENST00000512606 CD163L1Q9NR16 1453 aa16.61■□□□□ 0.25
TMEM173-211ENST00000512606 SOX12O15370 315 aa16.61■□□□□ 0.25
TMEM173-211ENST00000512606 IL2RBP14784 551 aa16.6■□□□□ 0.25
TMEM173-211ENST00000512606 NLGN2Q8NFZ4 835 aa16.6■□□□□ 0.25
TMEM173-211ENST00000512606 SLC27A3Q5K4L6 730 aa16.59■□□□□ 0.25
TMEM173-211ENST00000512606 ADCY9O60503 1353 aa16.59■□□□□ 0.25
TMEM173-211ENST00000512606 NSD2O96028 1365 aa16.59■□□□□ 0.25
TMEM173-211ENST00000512606 KTN1Q86UP2 1357 aaKnown RBP16.59■□□□□ 0.25
TMEM173-211ENST00000512606 ATP10DQ9P241 1426 aa16.59■□□□□ 0.25
TMEM173-211ENST00000512606 POLD1P28340 1107 aa16.58■□□□□ 0.24
TMEM173-211ENST00000512606 TOGARAM1Q9Y4F4 1720 aa16.56■□□□□ 0.24
TMEM173-211ENST00000512606 SBNO2Q9Y2G9 1366 aa16.56■□□□□ 0.24
TMEM173-211ENST00000512606 YBX3P16989 372 aaKnown RBP eCLIP16.56■□□□□ 0.24
TMEM173-211ENST00000512606 KLHL34Q8N239 644 aa16.56■□□□□ 0.24
TMEM173-211ENST00000512606 NLRP2Q9NX02 1062 aa16.55■□□□□ 0.24
TMEM173-211ENST00000512606 ANKRD36BQ8N2N9 1353 aa16.54■□□□□ 0.24
TMEM173-211ENST00000512606 PELP1Q8IZL8 1130 aaKnown RBP16.54■□□□□ 0.24
TMEM173-211ENST00000512606 CICQ96RK0 1608 aaPredicted RBP16.53■□□□□ 0.24
TMEM173-211ENST00000512606 UBR3Q6ZT12 1888 aa16.53■□□□□ 0.24
TMEM173-211ENST00000512606 ANKRD24Q8TF21 1146 aa16.53■□□□□ 0.24
TMEM173-211ENST00000512606 EDC4Q6P2E9 1401 aaKnown RBP16.53■□□□□ 0.24
TMEM173-211ENST00000512606 GRIN3BO60391 1043 aa16.52■□□□□ 0.24
TMEM173-211ENST00000512606 MEGF6O75095 1541 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms