RNA–Protein interactions for RNA: ENST00000512553.5

ITGA3-213, Transcript of integrin subunit alpha 3, humanhuman

TSL 3

Gene ITGA3, Length 351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-213ENST00000512553 LARP1Q6PKG0 1096 aaKnown RBP13.23□□□□□ -0.29
ITGA3-213ENST00000512553 TMC1Q8TDI8 760 aa13.23□□□□□ -0.29
ITGA3-213ENST00000512553 LRRC37A3O60309 1634 aa13.23□□□□□ -0.29
ITGA3-213ENST00000512553 FAM208AQ9UK61 1670 aaKnown RBP13.22□□□□□ -0.29
ITGA3-213ENST00000512553 CDCA7Q9BWT1 371 aaPredicted RBP13.22□□□□□ -0.29
ITGA3-213ENST00000512553 USP35Q9P2H5 1018 aa13.22□□□□□ -0.29
ITGA3-213ENST00000512553 RGPD3A6NKT7 1758 aaPredicted RBP13.22□□□□□ -0.29
ITGA3-213ENST00000512553 RGPD4Q7Z3J3 1758 aa13.22□□□□□ -0.29
ITGA3-213ENST00000512553 CD163L1Q9NR16 1453 aa13.22□□□□□ -0.29
ITGA3-213ENST00000512553 WDR17Q8IZU2 1322 aa13.21□□□□□ -0.29
ITGA3-213ENST00000512553 ARHGEF25Q86VW2 580 aa13.21□□□□□ -0.29
ITGA3-213ENST00000512553 OVOS2A0A0G2JMS6 1433 aa13.21□□□□□ -0.3
ITGA3-213ENST00000512553 OVOS2A0A0J9YW53 1432 aa13.21□□□□□ -0.3
ITGA3-213ENST00000512553 OVOS2Q6IE36 1432 aa13.21□□□□□ -0.3
ITGA3-213ENST00000512553 CDCA8Q53HL2 280 aa13.2□□□□□ -0.3
ITGA3-213ENST00000512553 TOM1L2Q6ZVM7 507 aa13.2□□□□□ -0.3
ITGA3-213ENST00000512553 DEFB132Q7Z7B7 95 aa13.2□□□□□ -0.3
ITGA3-213ENST00000512553 LRP5O75197 1615 aa13.2□□□□□ -0.3
ITGA3-213ENST00000512553 A0A1W2PP64 1363 aa13.2□□□□□ -0.3
ITGA3-213ENST00000512553 USP47Q96K76 1375 aa13.2□□□□□ -0.3
ITGA3-213ENST00000512553 CCDC7Q96M83 1385 aa13.2□□□□□ -0.3
ITGA3-213ENST00000512553 RREB1Q92766 1687 aa13.19□□□□□ -0.3
ITGA3-213ENST00000512553 SBF2Q86WG5 1849 aa13.19□□□□□ -0.3
ITGA3-213ENST00000512553 ST20-MTHFSA0A0A6YYL1 179 aa13.18□□□□□ -0.3
ITGA3-213ENST00000512553 CSB-PGBD3P0DP91 1061 aa13.18□□□□□ -0.3
ITGA3-213ENST00000512553 TMF1P82094 1093 aa13.18□□□□□ -0.3
ITGA3-213ENST00000512553 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.18□□□□□ -0.3
ITGA3-213ENST00000512553 TESK2Q96S53 571 aa13.18□□□□□ -0.3
ITGA3-213ENST00000512553 PEAK1Q9H792 1746 aa13.18□□□□□ -0.3
ITGA3-213ENST00000512553 CARD10Q9BWT7 1032 aa13.17□□□□□ -0.3
ITGA3-213ENST00000512553 KIF20BQ96Q89 1820 aa13.17□□□□□ -0.3
ITGA3-213ENST00000512553 ANKRD36BQ8N2N9 1353 aa13.17□□□□□ -0.3
ITGA3-213ENST00000512553 SOX12O15370 315 aa13.16□□□□□ -0.3
ITGA3-213ENST00000512553 DDB1Q16531 1140 aa13.16□□□□□ -0.3
ITGA3-213ENST00000512553 SLC12A5Q9H2X9 1139 aa13.16□□□□□ -0.3
ITGA3-213ENST00000512553 BCL9O00512 1426 aa13.15□□□□□ -0.3
ITGA3-213ENST00000512553 TRIM37O94972 964 aa13.15□□□□□ -0.3
ITGA3-213ENST00000512553 FAM182BQ5T319 152 aa13.15□□□□□ -0.3
ITGA3-213ENST00000512553 NUP188Q5SRE5 1749 aa13.15□□□□□ -0.3
ITGA3-213ENST00000512553 EN1Q05925 392 aaPredicted RBP13.14□□□□□ -0.31
ITGA3-213ENST00000512553 NME9Q86XW9 330 aa13.14□□□□□ -0.31
ITGA3-213ENST00000512553 ERBB3P21860 1342 aa13.13□□□□□ -0.31
ITGA3-213ENST00000512553 TNS2Q63HR2 1409 aa13.13□□□□□ -0.31
ITGA3-213ENST00000512553 APBA3O96018 575 aa13.13□□□□□ -0.31
ITGA3-213ENST00000512553 COG3Q96JB2 828 aa13.13□□□□□ -0.31
ITGA3-213ENST00000512553 AXIN2Q9Y2T1 843 aa13.13□□□□□ -0.31
ITGA3-213ENST00000512553 MYOM1P52179 1685 aa13.12□□□□□ -0.31
ITGA3-213ENST00000512553 RTL1A6NKG5 1358 aa13.12□□□□□ -0.31
ITGA3-213ENST00000512553 SRCAPQ6ZRS2 3230 aa13.11□□□□□ -0.31
ITGA3-213ENST00000512553 CAMKK2Q96RR4 588 aa13.11□□□□□ -0.31
ITGA3-213ENST00000512553 NHSQ6T4R5 1651 aa13.1□□□□□ -0.31
ITGA3-213ENST00000512553 EXOC5O00471 708 aa13.1□□□□□ -0.31
ITGA3-213ENST00000512553 NBPF14Q5TI25 921 aa13.1□□□□□ -0.31
ITGA3-213ENST00000512553 PCGF6Q9BYE7 350 aa13.1□□□□□ -0.31
ITGA3-213ENST00000512553 EZH2Q15910 746 aaKnown RBP13.09□□□□□ -0.31
ITGA3-213ENST00000512553 SMG6Q86US8 1419 aaKnown RBP13.09□□□□□ -0.31
ITGA3-213ENST00000512553 NLRP2Q9NX02 1062 aa13.09□□□□□ -0.31
ITGA3-213ENST00000512553 KAT6BQ8WYB5 2073 aa13.09□□□□□ -0.31
ITGA3-213ENST00000512553 IL2RBP14784 551 aa13.08□□□□□ -0.32
ITGA3-213ENST00000512553 ANKRD24Q8TF21 1146 aa13.08□□□□□ -0.32
ITGA3-213ENST00000512553 IP6K1Q92551 441 aa13.08□□□□□ -0.32
ITGA3-213ENST00000512553 BCL11BQ9C0K0 894 aaPredicted RBP13.08□□□□□ -0.32
ITGA3-213ENST00000512553 KIF24Q5T7B8 1368 aa13.07□□□□□ -0.32
ITGA3-213ENST00000512553 PLSCR1O15162 318 aa13.07□□□□□ -0.32
ITGA3-213ENST00000512553 PSDA5PKW4 1024 aaPredicted RBP13.06□□□□□ -0.32
ITGA3-213ENST00000512553 AMPHP49418 695 aa13.06□□□□□ -0.32
ITGA3-213ENST00000512553 ANKRD26Q9UPS8 1709 aa13.05□□□□□ -0.32
ITGA3-213ENST00000512553 R3HDM1Q15032 1099 aaKnown RBP13.05□□□□□ -0.32
ITGA3-213ENST00000512553 MARCH10Q8NA82 808 aaPredicted RBP13.05□□□□□ -0.32
ITGA3-213ENST00000512553 CCER1Q8TC90 406 aaPredicted RBP13.05□□□□□ -0.32
ITGA3-213ENST00000512553 MAP3K19Q56UN5 1328 aa13.04□□□□□ -0.32
ITGA3-213ENST00000512553 RGPD2P0DJD1 1756 aa13.04□□□□□ -0.32
ITGA3-213ENST00000512553 BTAF1O14981 1849 aa13.04□□□□□ -0.32
ITGA3-213ENST00000512553 HOXC9P31274 260 aa13.03□□□□□ -0.32
ITGA3-213ENST00000512553 FLT4P35916 1363 aa13.03□□□□□ -0.32
ITGA3-213ENST00000512553 NSD3Q9BZ95 1437 aa13.03□□□□□ -0.32
ITGA3-213ENST00000512553 FYB1O15117 783 aa13.02□□□□□ -0.33
ITGA3-213ENST00000512553 EIF4G2P78344 907 aaKnown RBP eCLIP13.02□□□□□ -0.33
ITGA3-213ENST00000512553 CGNL1Q0VF96 1302 aa13.02□□□□□ -0.33
ITGA3-213ENST00000512553 GGNBP2Q9H3C7 697 aa13.01□□□□□ -0.33
ITGA3-213ENST00000512553 MAP2P11137 1827 aaKnown RBP13.01□□□□□ -0.33
ITGA3-213ENST00000512553 DOT1LQ8TEK3 1739 aa13□□□□□ -0.33
ITGA3-213ENST00000512553 SHANK3Q9BYB0 1731 aa13□□□□□ -0.33
ITGA3-213ENST00000512553 INSRP06213 1382 aa13□□□□□ -0.33
ITGA3-213ENST00000512553 LTV1Q96GA3 475 aaPredicted RBP13□□□□□ -0.33
ITGA3-213ENST00000512553 CASZ1Q86V15 1759 aa12.99□□□□□ -0.33
ITGA3-213ENST00000512553 NSD2O96028 1365 aa12.97□□□□□ -0.33
ITGA3-213ENST00000512553 QSER1Q2KHR3 1735 aa12.97□□□□□ -0.33
ITGA3-213ENST00000512553 HMGB2P26583 209 aaKnown RBP12.97□□□□□ -0.33
ITGA3-213ENST00000512553 RRS1Q15050 365 aaKnown RBP12.97□□□□□ -0.33
ITGA3-213ENST00000512553 RAPGEF4Q8WZA2 1011 aa12.97□□□□□ -0.33
ITGA3-213ENST00000512553 STK32BQ9NY57 414 aa12.97□□□□□ -0.33
ITGA3-213ENST00000512553 PKD1L3Q7Z443 1732 aa12.96□□□□□ -0.33
ITGA3-213ENST00000512553 TXNRD1Q16881 649 aa12.96□□□□□ -0.33
ITGA3-213ENST00000512553 SPON1Q9HCB6 807 aa12.96□□□□□ -0.33
ITGA3-213ENST00000512553 MEGF6O75095 1541 aa12.96□□□□□ -0.33
ITGA3-213ENST00000512553 PAPPAQ13219 1627 aa12.95□□□□□ -0.34
ITGA3-213ENST00000512553 PLEKHG2Q9H7P9 1386 aa12.95□□□□□ -0.34
ITGA3-213ENST00000512553 TATP17735 454 aaPredicted RBP12.95□□□□□ -0.34
ITGA3-213ENST00000512553 ZCRB1Q8TBF4 217 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms