RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 CASZ1Q86V15 1759 aa18.3■□□□□ 0.52
DDX41-215ENST00000512431 RAB3GAP2Q9H2M9 1393 aa18.3■□□□□ 0.52
DDX41-215ENST00000512431 PEAK1Q9H792 1746 aa18.29■□□□□ 0.52
DDX41-215ENST00000512431 SLC15A2Q16348 729 aa18.29■□□□□ 0.52
DDX41-215ENST00000512431 TXNRD1Q16881 649 aa18.29■□□□□ 0.52
DDX41-215ENST00000512431 MARCH10Q8NA82 808 aaPredicted RBP18.29■□□□□ 0.52
DDX41-215ENST00000512431 C1QTNF8P60827 252 aa18.28■□□□□ 0.52
DDX41-215ENST00000512431 MTFR1LQ9H019 292 aa18.28■□□□□ 0.52
DDX41-215ENST00000512431 WDR17Q8IZU2 1322 aa18.27■□□□□ 0.52
DDX41-215ENST00000512431 EXOC5O00471 708 aa18.27■□□□□ 0.52
DDX41-215ENST00000512431 LRRC37A3O60309 1634 aa18.27■□□□□ 0.51
DDX41-215ENST00000512431 SBF2Q86WG5 1849 aa18.26■□□□□ 0.51
DDX41-215ENST00000512431 BCL9O00512 1426 aa18.26■□□□□ 0.51
DDX41-215ENST00000512431 MYOM1P52179 1685 aa18.26■□□□□ 0.51
DDX41-215ENST00000512431 CSB-PGBD3P0DP91 1061 aa18.26■□□□□ 0.51
DDX41-215ENST00000512431 CABP2Q9NPB3 220 aa18.26■□□□□ 0.51
DDX41-215ENST00000512431 ARXQ96QS3 562 aa18.24■□□□□ 0.51
DDX41-215ENST00000512431 CABP1Q9NZU7 370 aa18.24■□□□□ 0.51
DDX41-215ENST00000512431 CARD10Q9BWT7 1032 aa18.23■□□□□ 0.51
DDX41-215ENST00000512431 AXIN2Q9Y2T1 843 aa18.23■□□□□ 0.51
DDX41-215ENST00000512431 CENPJQ9HC77 1338 aaPredicted RBP18.23■□□□□ 0.51
DDX41-215ENST00000512431 KCNH5Q8NCM2 988 aa18.22■□□□□ 0.51
DDX41-215ENST00000512431 USP6P35125 1406 aa18.22■□□□□ 0.51
DDX41-215ENST00000512431 GPR162Q16538 588 aa18.21■□□□□ 0.51
DDX41-215ENST00000512431 SLIT3O75094 1523 aa18.21■□□□□ 0.51
DDX41-215ENST00000512431 ARHGEF25Q86VW2 580 aa18.2■□□□□ 0.5
DDX41-215ENST00000512431 SGIP1Q9BQI5 828 aa18.2■□□□□ 0.5
DDX41-215ENST00000512431 NBPF1Q3BBV0 1214 aa18.19■□□□□ 0.5
DDX41-215ENST00000512431 AKAP12Q02952 1782 aa18.19■□□□□ 0.5
DDX41-215ENST00000512431 CPSF1Q10570 1443 aaKnown RBP18.18■□□□□ 0.5
DDX41-215ENST00000512431 SOX12O15370 315 aa18.18■□□□□ 0.5
DDX41-215ENST00000512431 CCDC7Q96M83 1385 aa18.17■□□□□ 0.5
DDX41-215ENST00000512431 GIGYF1O75420 1035 aaPredicted RBP18.17■□□□□ 0.5
DDX41-215ENST00000512431 IFFO2Q5TF58 517 aa18.17■□□□□ 0.5
DDX41-215ENST00000512431 ZNF692Q9BU19 519 aaPredicted RBP18.17■□□□□ 0.5
DDX41-215ENST00000512431 CHD4Q14839 1912 aa18.17■□□□□ 0.5
DDX41-215ENST00000512431 KIAA1210Q9ULL0 1709 aa18.17■□□□□ 0.5
DDX41-215ENST00000512431 MAP3K5Q99683 1374 aa18.16■□□□□ 0.5
DDX41-215ENST00000512431 COL18A1P39060 1754 aa18.15■□□□□ 0.5
DDX41-215ENST00000512431 WNK3Q9BYP7 1800 aa18.15■□□□□ 0.5
DDX41-215ENST00000512431 ACSBG1Q96GR2 724 aa18.15■□□□□ 0.5
DDX41-215ENST00000512431 UTRNP46939 3433 aa18.14■□□□□ 0.5
DDX41-215ENST00000512431 KLHL34Q8N239 644 aa18.14■□□□□ 0.49
DDX41-215ENST00000512431 EVC2Q86UK5 1308 aa18.14■□□□□ 0.49
DDX41-215ENST00000512431 POLD1P28340 1107 aa18.13■□□□□ 0.49
DDX41-215ENST00000512431 PELP1Q8IZL8 1130 aaKnown RBP18.13■□□□□ 0.49
DDX41-215ENST00000512431 TTC21BQ7Z4L5 1316 aa18.13■□□□□ 0.49
DDX41-215ENST00000512431 TNS2Q63HR2 1409 aa18.13■□□□□ 0.49
DDX41-215ENST00000512431 SLC16A10Q8TF71 515 aa18.12■□□□□ 0.49
DDX41-215ENST00000512431 TTC21AQ8NDW8 1320 aa18.12■□□□□ 0.49
DDX41-215ENST00000512431 PIK3C2AO00443 1686 aa18.11■□□□□ 0.49
DDX41-215ENST00000512431 NLRP2Q9NX02 1062 aa18.1■□□□□ 0.49
DDX41-215ENST00000512431 QRICH2Q9H0J4 1663 aa18.09■□□□□ 0.49
DDX41-215ENST00000512431 IL2RBP14784 551 aa18.09■□□□□ 0.49
DDX41-215ENST00000512431 ZNF827Q17R98 1081 aa18.08■□□□□ 0.48
DDX41-215ENST00000512431 NHSQ6T4R5 1651 aa18.08■□□□□ 0.48
DDX41-215ENST00000512431 RGPD5Q99666 1765 aa18.07■□□□□ 0.48
DDX41-215ENST00000512431 TRPM1Q7Z4N2 1603 aa18.06■□□□□ 0.48
DDX41-215ENST00000512431 SLC27A3Q5K4L6 730 aa18.06■□□□□ 0.48
DDX41-215ENST00000512431 LRRC4BQ9NT99 713 aa18.06■□□□□ 0.48
DDX41-215ENST00000512431 ABCC6O95255 1503 aa18.05■□□□□ 0.48
DDX41-215ENST00000512431 TFCP2L1Q9NZI6 479 aa18.05■□□□□ 0.48
DDX41-215ENST00000512431 KTN1Q86UP2 1357 aaKnown RBP18.04■□□□□ 0.48
DDX41-215ENST00000512431 GRIN3BO60391 1043 aa18.04■□□□□ 0.48
DDX41-215ENST00000512431 AKT1S1Q96B36 256 aa18.04■□□□□ 0.48
DDX41-215ENST00000512431 PAPPAQ13219 1627 aa18.04■□□□□ 0.48
DDX41-215ENST00000512431 ERBB3P21860 1342 aa18.03■□□□□ 0.48
DDX41-215ENST00000512431 NFAT5O94916 1531 aa18.02■□□□□ 0.47
DDX41-215ENST00000512431 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.01■□□□□ 0.47
DDX41-215ENST00000512431 ANKRD24Q8TF21 1146 aa18.01■□□□□ 0.47
DDX41-215ENST00000512431 PNPLA7Q6ZV29 1317 aa18■□□□□ 0.47
DDX41-215ENST00000512431 BTAF1O14981 1849 aa18■□□□□ 0.47
DDX41-215ENST00000512431 NLGN2Q8NFZ4 835 aa18■□□□□ 0.47
DDX41-215ENST00000512431 DDX54Q8TDD1 881 aaKnown RBP18■□□□□ 0.47
DDX41-215ENST00000512431 SYTL4Q96C24 671 aaPredicted RBP17.99■□□□□ 0.47
DDX41-215ENST00000512431 MSH5O43196 834 aa17.98■□□□□ 0.47
DDX41-215ENST00000512431 USP31Q70CQ4 1352 aa17.97■□□□□ 0.47
DDX41-215ENST00000512431 YBX3P16989 372 aaKnown RBP eCLIP17.95■□□□□ 0.463e-6■□□□□ 10.1
DDX41-215ENST00000512431 KCNQ4P56696 695 aa17.95■□□□□ 0.46
DDX41-215ENST00000512431 NME9Q86XW9 330 aa17.95■□□□□ 0.46
DDX41-215ENST00000512431 QSER1Q2KHR3 1735 aa17.95■□□□□ 0.46
DDX41-215ENST00000512431 KAT6BQ8WYB5 2073 aa17.94■□□□□ 0.46
DDX41-215ENST00000512431 PRIM1P49642 420 aaKnown RBP17.94■□□□□ 0.46
DDX41-215ENST00000512431 HDGFL2Q7Z4V5 671 aaPredicted RBP17.94■□□□□ 0.46
DDX41-215ENST00000512431 GPBP1L1Q9HC44 474 aaPredicted RBP17.94■□□□□ 0.46
DDX41-215ENST00000512431 SHANK3Q9BYB0 1731 aa17.94■□□□□ 0.46
DDX41-215ENST00000512431 ROCK2O75116 1388 aaKnown RBP17.93■□□□□ 0.46
DDX41-215ENST00000512431 L3MBTL2Q969R5 705 aa17.93■□□□□ 0.46
DDX41-215ENST00000512431 CEP350Q5VT06 3117 aa17.92■□□□□ 0.46
DDX41-215ENST00000512431 TMC1Q8TDI8 760 aa17.92■□□□□ 0.46
DDX41-215ENST00000512431 CCNL1Q9UK58 526 aaPredicted RBP17.92■□□□□ 0.46
DDX41-215ENST00000512431 GOLGB1Q14789 3259 aaKnown RBP17.92■□□□□ 0.46
DDX41-215ENST00000512431 ANKRD36BQ8N2N9 1353 aa17.91■□□□□ 0.46
DDX41-215ENST00000512431 ATP10DQ9P241 1426 aa17.91■□□□□ 0.46
DDX41-215ENST00000512431 HMGB2P26583 209 aaKnown RBP17.91■□□□□ 0.46
DDX41-215ENST00000512431 LTV1Q96GA3 475 aaPredicted RBP17.91■□□□□ 0.46
DDX41-215ENST00000512431 COL24A1Q17RW2 1714 aa17.91■□□□□ 0.46
DDX41-215ENST00000512431 IP6K1Q92551 441 aa17.9■□□□□ 0.46
DDX41-215ENST00000512431 HSPA6P17066 643 aa17.89■□□□□ 0.45
DDX41-215ENST00000512431 COL23A1Q86Y22 540 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms