RNA–Protein interactions for RNA: ENST00000512147.5

CLDND1-225, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-225ENST00000512147 ATP7BP35670 1465 aa9.95□□□□□ -0.82
CLDND1-225ENST00000512147 PXDNLA1KZ92 1463 aa9.94□□□□□ -0.82
CLDND1-225ENST00000512147 NAIPQ13075 1403 aa9.94□□□□□ -0.82
CLDND1-225ENST00000512147 MSH5O43196 834 aa9.94□□□□□ -0.82
CLDND1-225ENST00000512147 AKT1S1Q96B36 256 aa9.94□□□□□ -0.82
CLDND1-225ENST00000512147 KIAA0232Q92628 1395 aa9.93□□□□□ -0.82
CLDND1-225ENST00000512147 PLEKHG2Q9H7P9 1386 aa9.92□□□□□ -0.82
CLDND1-225ENST00000512147 PARP4Q9UKK3 1724 aaKnown RBP9.92□□□□□ -0.82
CLDND1-225ENST00000512147 BCL9O00512 1426 aa9.91□□□□□ -0.82
CLDND1-225ENST00000512147 BRD4O60885 1362 aaPredicted RBP9.91□□□□□ -0.82
CLDND1-225ENST00000512147 CNTNAP1P78357 1384 aa9.91□□□□□ -0.82
CLDND1-225ENST00000512147 MAP2K1Q02750 393 aaPredicted RBP9.91□□□□□ -0.82
CLDND1-225ENST00000512147 ARHGAP27Q6ZUM4 889 aa9.91□□□□□ -0.82
CLDND1-225ENST00000512147 MARCH10Q8NA82 808 aaPredicted RBP9.91□□□□□ -0.82
CLDND1-225ENST00000512147 MCOLN1Q9GZU1 580 aa9.91□□□□□ -0.82
CLDND1-225ENST00000512147 KCPQ6ZWJ8 1503 aa9.91□□□□□ -0.82
CLDND1-225ENST00000512147 PAPPAQ13219 1627 aa9.9□□□□□ -0.82
CLDND1-225ENST00000512147 ZC3H6P61129 1189 aaKnown RBP9.9□□□□□ -0.82
CLDND1-225ENST00000512147 C9orf131Q5VYM1 1079 aa9.9□□□□□ -0.82
CLDND1-225ENST00000512147 HIRIP3Q9BW71 556 aaPredicted RBP9.9□□□□□ -0.82
CLDND1-225ENST00000512147 PHRF1Q9P1Y6 1649 aaKnown RBP9.89□□□□□ -0.83
CLDND1-225ENST00000512147 VEGFBP49765 207 aa9.89□□□□□ -0.83
CLDND1-225ENST00000512147 MSL1Q68DK7 614 aa9.89□□□□□ -0.83
CLDND1-225ENST00000512147 LRRC4BQ9NT99 713 aa9.89□□□□□ -0.83
CLDND1-225ENST00000512147 IQGAP3Q86VI3 1631 aa9.89□□□□□ -0.83
CLDND1-225ENST00000512147 VEGFAP15692 232 aaPredicted RBP9.88□□□□□ -0.83
CLDND1-225ENST00000512147 NBPF15Q8N660 670 aa9.88□□□□□ -0.83
CLDND1-225ENST00000512147 CICQ96RK0 1608 aaPredicted RBP9.88□□□□□ -0.83
CLDND1-225ENST00000512147 NRXN1Q9ULB1 1477 aa9.87□□□□□ -0.83
CLDND1-225ENST00000512147 FXR1P51114 621 aaKnown RBP eCLIP9.87□□□□□ -0.83
CLDND1-225ENST00000512147 SOX10P56693 466 aa9.87□□□□□ -0.83
CLDND1-225ENST00000512147 BEGAINQ9BUH8 593 aa9.87□□□□□ -0.83
CLDND1-225ENST00000512147 QSER1Q2KHR3 1735 aa9.86□□□□□ -0.83
CLDND1-225ENST00000512147 WAPLQ7Z5K2 1190 aa9.86□□□□□ -0.83
CLDND1-225ENST00000512147 ZNF219Q9P2Y4 722 aaPredicted RBP9.86□□□□□ -0.83
CLDND1-225ENST00000512147 GPRASP1Q5JY77 1395 aa9.86□□□□□ -0.83
CLDND1-225ENST00000512147 ANKRD30BQ9BXX2 1392 aa9.86□□□□□ -0.83
CLDND1-225ENST00000512147 SLC27A3Q5K4L6 730 aa9.85□□□□□ -0.83
CLDND1-225ENST00000512147 BCS1LQ9Y276 419 aa9.85□□□□□ -0.83
CLDND1-225ENST00000512147 TNRC6CQ9HCJ0 1690 aaKnown RBP9.85□□□□□ -0.83
CLDND1-225ENST00000512147 PAK3O75914 559 aaPredicted RBP9.84□□□□□ -0.83
CLDND1-225ENST00000512147 DGKZQ13574 1117 aa9.83□□□□□ -0.84
CLDND1-225ENST00000512147 COL23A1Q86Y22 540 aaPredicted RBP9.83□□□□□ -0.84
CLDND1-225ENST00000512147 MYOM3Q5VTT5 1437 aa9.82□□□□□ -0.84
CLDND1-225ENST00000512147 FMN2Q9NZ56 1722 aa9.82□□□□□ -0.84
CLDND1-225ENST00000512147 CDCA7Q9BWT1 371 aaPredicted RBP9.82□□□□□ -0.84
CLDND1-225ENST00000512147 RNF181Q9P0P0 153 aa9.82□□□□□ -0.84
CLDND1-225ENST00000512147 LRRC37A3O60309 1634 aa9.82□□□□□ -0.84
CLDND1-225ENST00000512147 CRB1P82279 1406 aa9.82□□□□□ -0.84
CLDND1-225ENST00000512147 VGFO15240 615 aaPredicted RBP9.81□□□□□ -0.84
CLDND1-225ENST00000512147 MNX1P50219 401 aaPredicted RBP9.81□□□□□ -0.84
CLDND1-225ENST00000512147 ACSBG1Q96GR2 724 aa9.81□□□□□ -0.84
CLDND1-225ENST00000512147 EXOC5O00471 708 aa9.8□□□□□ -0.84
CLDND1-225ENST00000512147 STK26Q9P289 416 aa9.8□□□□□ -0.84
CLDND1-225ENST00000512147 ALS2Q96Q42 1657 aa9.79□□□□□ -0.84
CLDND1-225ENST00000512147 RGPD8O14715 1765 aaPredicted RBP9.78□□□□□ -0.84
CLDND1-225ENST00000512147 AKAP12Q02952 1782 aa9.78□□□□□ -0.84
CLDND1-225ENST00000512147 ANKRD30AQ9BXX3 1397 aa9.78□□□□□ -0.84
CLDND1-225ENST00000512147 CHADLQ6NUI6 762 aa9.78□□□□□ -0.84
CLDND1-225ENST00000512147 VIRMAQ69YN4 1812 aaKnown RBP9.77□□□□□ -0.84
CLDND1-225ENST00000512147 USP6P35125 1406 aa9.77□□□□□ -0.85
CLDND1-225ENST00000512147 TMEM88BA6NKF7 163 aa9.77□□□□□ -0.85
CLDND1-225ENST00000512147 FCHSD2O94868 740 aa9.77□□□□□ -0.85
CLDND1-225ENST00000512147 DEFB115Q30KQ5 88 aa9.77□□□□□ -0.85
CLDND1-225ENST00000512147 TOM1L2Q6ZVM7 507 aa9.77□□□□□ -0.85
CLDND1-225ENST00000512147 ACIN1Q9UKV3 1341 aaKnown RBP9.77□□□□□ -0.85
CLDND1-225ENST00000512147 TRPM3Q9HCF6 1732 aaPredicted RBP9.76□□□□□ -0.85
CLDND1-225ENST00000512147 CRYBG1Q9Y4K1 1723 aa9.76□□□□□ -0.85
CLDND1-225ENST00000512147 CLTCL1P53675 1640 aa9.76□□□□□ -0.85
CLDND1-225ENST00000512147 GLTPD2A6NH11 291 aa9.76□□□□□ -0.85
CLDND1-225ENST00000512147 WDR33Q9C0J8 1336 aaKnown RBP9.76□□□□□ -0.85
CLDND1-225ENST00000512147 KCNQ4P56696 695 aa9.75□□□□□ -0.85
CLDND1-225ENST00000512147 FLAD1Q8NFF5 587 aa9.75□□□□□ -0.85
CLDND1-225ENST00000512147 TSKSQ9UJT2 592 aa9.75□□□□□ -0.85
CLDND1-225ENST00000512147 CHIC2Q9UKJ5 165 aa9.75□□□□□ -0.85
CLDND1-225ENST00000512147 PKD1L3Q7Z443 1732 aa9.74□□□□□ -0.85
CLDND1-225ENST00000512147 TUBGCP6Q96RT7 1819 aa9.74□□□□□ -0.85
CLDND1-225ENST00000512147 PRR36Q9H6K5 1346 aa9.74□□□□□ -0.85
CLDND1-225ENST00000512147 PLEKHH1Q9ULM0 1364 aa9.74□□□□□ -0.85
CLDND1-225ENST00000512147 NHSQ6T4R5 1651 aa9.74□□□□□ -0.85
CLDND1-225ENST00000512147 A0A0C4DFX4 3053 aa9.74□□□□□ -0.85
CLDND1-225ENST00000512147 COL5A2P05997 1499 aaPredicted RBP9.73□□□□□ -0.85
CLDND1-225ENST00000512147 TGFB2P61812 414 aa9.73□□□□□ -0.85
CLDND1-225ENST00000512147 NUTM2GQ5VZR2 741 aa9.73□□□□□ -0.85
CLDND1-225ENST00000512147 ZC3H4Q9UPT8 1303 aaKnown RBP9.73□□□□□ -0.85
CLDND1-225ENST00000512147 E9PCH4 1651 aa9.72□□□□□ -0.85
CLDND1-225ENST00000512147 A0A0G2JLW4 131 aa9.72□□□□□ -0.85
CLDND1-225ENST00000512147 RASSF10A6NK89 507 aa9.72□□□□□ -0.85
CLDND1-225ENST00000512147 NGDNQ8NEJ9 315 aaKnown RBP9.72□□□□□ -0.85
CLDND1-225ENST00000512147 CPDO75976 1380 aa9.72□□□□□ -0.85
CLDND1-225ENST00000512147 TRPM1Q7Z4N2 1603 aa9.71□□□□□ -0.85
CLDND1-225ENST00000512147 CA12O43570 354 aa9.71□□□□□ -0.86
CLDND1-225ENST00000512147 BTAF1O14981 1849 aa9.7□□□□□ -0.86
CLDND1-225ENST00000512147 KAT6BQ8WYB5 2073 aa9.7□□□□□ -0.86
CLDND1-225ENST00000512147 VPS8Q8N3P4 1428 aa9.7□□□□□ -0.86
CLDND1-225ENST00000512147 ADAMTS7Q9UKP4 1686 aa9.7□□□□□ -0.86
CLDND1-225ENST00000512147 LMO7Q8WWI1 1683 aa9.69□□□□□ -0.86
CLDND1-225ENST00000512147 ABCC11Q96J66 1382 aa9.69□□□□□ -0.86
CLDND1-225ENST00000512147 PASKQ96RG2 1323 aa9.69□□□□□ -0.86
CLDND1-225ENST00000512147 CASP8AP2Q9UKL3 1982 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms