RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 HNRNPUQ00839 825 aaKnown RBP eCLIP13.3□□□□□ -0.28
PDGFRA-209ENST00000512143 CABLES1Q8TDN4 633 aa13.3□□□□□ -0.28
PDGFRA-209ENST00000512143 COL22A1Q8NFW1 1626 aaPredicted RBP13.3□□□□□ -0.28
PDGFRA-209ENST00000512143 RGPD1P0DJD0 1748 aa13.3□□□□□ -0.28
PDGFRA-209ENST00000512143 U2AF1L5P0DN76 240 aaPredicted RBP13.29□□□□□ -0.28
PDGFRA-209ENST00000512143 U2AF1Q01081 240 aaKnown RBP eCLIP13.29□□□□□ -0.28
PDGFRA-209ENST00000512143 COL18A1P39060 1754 aa13.29□□□□□ -0.28
PDGFRA-209ENST00000512143 PHLPP1O60346 1717 aa13.28□□□□□ -0.28
PDGFRA-209ENST00000512143 ABCA3Q99758 1704 aa13.28□□□□□ -0.28
PDGFRA-209ENST00000512143 FCHSD2O94868 740 aa13.28□□□□□ -0.28
PDGFRA-209ENST00000512143 PIP4K2BP78356 416 aa13.28□□□□□ -0.28
PDGFRA-209ENST00000512143 PLEKHF1Q96S99 279 aa13.28□□□□□ -0.28
PDGFRA-209ENST00000512143 ZBED9Q6R2W3 1325 aa13.28□□□□□ -0.28
PDGFRA-209ENST00000512143 ABCC6O95255 1503 aa13.28□□□□□ -0.28
PDGFRA-209ENST00000512143 U2SURPO15042 1029 aaKnown RBP13.27□□□□□ -0.29
PDGFRA-209ENST00000512143 RUNDC1Q96C34 613 aa13.27□□□□□ -0.29
PDGFRA-209ENST00000512143 RSPH6AQ9H0K4 717 aa13.27□□□□□ -0.29
PDGFRA-209ENST00000512143 ZC3H6P61129 1189 aaKnown RBP13.26□□□□□ -0.29
PDGFRA-209ENST00000512143 NCBP3Q53F19 620 aaKnown RBP13.26□□□□□ -0.29
PDGFRA-209ENST00000512143 CCDC146Q8IYE0 955 aa13.26□□□□□ -0.29
PDGFRA-209ENST00000512143 IGSF1Q8N6C5 1336 aa13.26□□□□□ -0.29
PDGFRA-209ENST00000512143 AXIN2Q9Y2T1 843 aa13.26□□□□□ -0.29
PDGFRA-209ENST00000512143 KDRP35968 1356 aa13.25□□□□□ -0.29
PDGFRA-209ENST00000512143 KIAA0232Q92628 1395 aa13.25□□□□□ -0.29
PDGFRA-209ENST00000512143 EYA1Q99502 592 aa13.25□□□□□ -0.29
PDGFRA-209ENST00000512143 APAF1O14727 1248 aa13.24□□□□□ -0.29
PDGFRA-209ENST00000512143 PLEKHG5O94827 1062 aa13.24□□□□□ -0.29
PDGFRA-209ENST00000512143 NCAPD2Q15021 1401 aa13.23□□□□□ -0.29
PDGFRA-209ENST00000512143 ZNF521Q96K83 1311 aa13.23□□□□□ -0.29
PDGFRA-209ENST00000512143 NGEFQ8N5V2 710 aa13.23□□□□□ -0.29
PDGFRA-209ENST00000512143 PNNQ9H307 717 aaKnown RBP13.23□□□□□ -0.29
PDGFRA-209ENST00000512143 RGPD5Q99666 1765 aa13.22□□□□□ -0.29
PDGFRA-209ENST00000512143 LMO7Q8WWI1 1683 aa13.22□□□□□ -0.29
PDGFRA-209ENST00000512143 HMOX1P09601 288 aa13.22□□□□□ -0.29
PDGFRA-209ENST00000512143 PRKAR2BP31323 418 aa13.22□□□□□ -0.29
PDGFRA-209ENST00000512143 SULT6B1Q6IMI4 303 aa13.22□□□□□ -0.29
PDGFRA-209ENST00000512143 AEBP1Q8IUX7 1158 aa13.22□□□□□ -0.29
PDGFRA-209ENST00000512143 TCP11L2Q8N4U5 519 aa13.22□□□□□ -0.29
PDGFRA-209ENST00000512143 ERBB3P21860 1342 aa13.21□□□□□ -0.29
PDGFRA-209ENST00000512143 CHRNA2Q15822 529 aa13.21□□□□□ -0.29
PDGFRA-209ENST00000512143 NBPF6Q5VWK0 638 aa13.21□□□□□ -0.29
PDGFRA-209ENST00000512143 ANKRD24Q8TF21 1146 aa13.21□□□□□ -0.29
PDGFRA-209ENST00000512143 PHACTR3Q96KR7 559 aa13.21□□□□□ -0.29
PDGFRA-209ENST00000512143 NBPF4Q96M43 638 aa13.21□□□□□ -0.29
PDGFRA-209ENST00000512143 CAMTA1Q9Y6Y1 1673 aa13.21□□□□□ -0.3
PDGFRA-209ENST00000512143 SENP3-EIF4A1A0A087X0R7 540 aa13.2□□□□□ -0.3
PDGFRA-209ENST00000512143 ZBTB7CA1YPR0 619 aa13.2□□□□□ -0.3
PDGFRA-209ENST00000512143 FAM83GA6ND36 823 aa13.2□□□□□ -0.3
PDGFRA-209ENST00000512143 CENPBP07199 599 aaPredicted RBP13.2□□□□□ -0.3
PDGFRA-209ENST00000512143 CCDC27Q2M243 656 aa13.2□□□□□ -0.3
PDGFRA-209ENST00000512143 LTV1Q96GA3 475 aaPredicted RBP13.2□□□□□ -0.3
PDGFRA-209ENST00000512143 PRDM11Q9NQV5 511 aa13.2□□□□□ -0.3
PDGFRA-209ENST00000512143 TMPOP42166 694 aaKnown RBP13.19□□□□□ -0.3
PDGFRA-209ENST00000512143 RGPD2P0DJD1 1756 aa13.19□□□□□ -0.3
PDGFRA-209ENST00000512143 JCADQ9P266 1359 aa13.19□□□□□ -0.3
PDGFRA-209ENST00000512143 HAP1P54257 671 aaPredicted RBP13.18□□□□□ -0.3
PDGFRA-209ENST00000512143 MAPK8IP3Q9UPT6 1336 aa13.17□□□□□ -0.3
PDGFRA-209ENST00000512143 PDE3BQ13370 1112 aa13.17□□□□□ -0.3
PDGFRA-209ENST00000512143 SALL2Q9Y467 1007 aaPredicted RBP13.17□□□□□ -0.3
PDGFRA-209ENST00000512143 COL5A2P05997 1499 aaPredicted RBP13.16□□□□□ -0.3
PDGFRA-209ENST00000512143 FAM208AQ9UK61 1670 aaKnown RBP13.16□□□□□ -0.3
PDGFRA-209ENST00000512143 HSPA1LP34931 641 aa13.16□□□□□ -0.3
PDGFRA-209ENST00000512143 NFE2L2Q16236 605 aa13.16□□□□□ -0.3
PDGFRA-209ENST00000512143 WWC1Q8IX03 1113 aa13.16□□□□□ -0.3
PDGFRA-209ENST00000512143 TRIM35Q9UPQ4 493 aa13.16□□□□□ -0.3
PDGFRA-209ENST00000512143 RRP7AQ9Y3A4 280 aaKnown RBP13.16□□□□□ -0.3
PDGFRA-209ENST00000512143 COL14A1Q05707 1796 aaKnown RBP13.16□□□□□ -0.3
PDGFRA-209ENST00000512143 WDR17Q8IZU2 1322 aa13.15□□□□□ -0.3
PDGFRA-209ENST00000512143 USHBP1Q8N6Y0 703 aa13.15□□□□□ -0.3
PDGFRA-209ENST00000512143 RIPK4P57078 832 aa13.14□□□□□ -0.31
PDGFRA-209ENST00000512143 TRMT2AQ8IZ69 625 aaKnown RBP13.14□□□□□ -0.31
PDGFRA-209ENST00000512143 PLEKHG2Q9H7P9 1386 aa13.14□□□□□ -0.31
PDGFRA-209ENST00000512143 SPATA31A6Q5VVP1 1343 aa13.13□□□□□ -0.31
PDGFRA-209ENST00000512143 NEFMP07197 916 aa13.13□□□□□ -0.31
PDGFRA-209ENST00000512143 NEUROD2Q15784 382 aa13.13□□□□□ -0.31
PDGFRA-209ENST00000512143 WDR63Q8IWG1 891 aa13.13□□□□□ -0.31
PDGFRA-209ENST00000512143 CDCA7LQ96GN5 454 aa13.13□□□□□ -0.31
PDGFRA-209ENST00000512143 DLG5Q8TDM6 1919 aa13.13□□□□□ -0.31
PDGFRA-209ENST00000512143 GOLGA2Q08379 1002 aa13.12□□□□□ -0.31
PDGFRA-209ENST00000512143 SLFN5Q08AF3 891 aa13.12□□□□□ -0.31
PDGFRA-209ENST00000512143 MTHFSDQ2M296 383 aaKnown RBP13.12□□□□□ -0.31
PDGFRA-209ENST00000512143 ILDR1Q86SU0 546 aaPredicted RBP13.12□□□□□ -0.31
PDGFRA-209ENST00000512143 CARD10Q9BWT7 1032 aa13.12□□□□□ -0.31
PDGFRA-209ENST00000512143 NLRP2Q9NX02 1062 aa13.12□□□□□ -0.31
PDGFRA-209ENST00000512143 BTG4Q9NY30 223 aa13.12□□□□□ -0.31
PDGFRA-209ENST00000512143 ADAMTS2O95450 1211 aa13.11□□□□□ -0.31
PDGFRA-209ENST00000512143 CSB-PGBD3P0DP91 1061 aa13.11□□□□□ -0.31
PDGFRA-209ENST00000512143 GAS2L2Q8NHY3 880 aa13.11□□□□□ -0.31
PDGFRA-209ENST00000512143 SPINK5Q9NQ38 1064 aaPredicted RBP13.11□□□□□ -0.31
PDGFRA-209ENST00000512143 SLIT2O94813 1529 aa13.11□□□□□ -0.31
PDGFRA-209ENST00000512143 NUTM2BA6NNL0 878 aaPredicted RBP13.1□□□□□ -0.31
PDGFRA-209ENST00000512143 NUTM2EB1AL46 878 aaPredicted RBP13.1□□□□□ -0.31
PDGFRA-209ENST00000512143 LARP1Q6PKG0 1096 aaKnown RBP13.1□□□□□ -0.31
PDGFRA-209ENST00000512143 NUTM2AQ8IVF1 878 aaPredicted RBP13.1□□□□□ -0.31
PDGFRA-209ENST00000512143 NRAPQ86VF7 1730 aa13.1□□□□□ -0.31
PDGFRA-209ENST00000512143 IL16Q14005 1332 aa13.1□□□□□ -0.31
PDGFRA-209ENST00000512143 LRP6O75581 1613 aa13.1□□□□□ -0.31
PDGFRA-209ENST00000512143 PLCH1Q4KWH8 1693 aa13.09□□□□□ -0.31
PDGFRA-209ENST00000512143 HTATSF1O43719 755 aaKnown RBP13.09□□□□□ -0.31
PDGFRA-209ENST00000512143 EVA1CP58658 441 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms