RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 NINLQ9Y2I6 1382 aa18.62■□□□□ 0.57
RNF4-215ENST00000511843 KIF20BQ96Q89 1820 aa18.61■□□□□ 0.57
RNF4-215ENST00000511843 PARP4Q9UKK3 1724 aaKnown RBP18.6■□□□□ 0.57
RNF4-215ENST00000511843 OVOS2A0A0J9YW53 1432 aa18.59■□□□□ 0.57
RNF4-215ENST00000511843 CRB1P82279 1406 aa18.59■□□□□ 0.57
RNF4-215ENST00000511843 OVOS2Q6IE36 1432 aa18.59■□□□□ 0.57
RNF4-215ENST00000511843 SLC24A1O60721 1099 aa18.59■□□□□ 0.57
RNF4-215ENST00000511843 ANKRD36BQ8N2N9 1353 aa18.58■□□□□ 0.57
RNF4-215ENST00000511843 TCP11L2Q8N4U5 519 aa18.58■□□□□ 0.56
RNF4-215ENST00000511843 BLMP54132 1417 aaPredicted RBP18.57■□□□□ 0.56
RNF4-215ENST00000511843 RGPD1P0DJD0 1748 aa18.57■□□□□ 0.56
RNF4-215ENST00000511843 TNS1Q9HBL0 1735 aaKnown RBP18.57■□□□□ 0.56
RNF4-215ENST00000511843 LRRC37A3O60309 1634 aa18.57■□□□□ 0.56
RNF4-215ENST00000511843 BARGINQ6ZT62 677 aa18.56■□□□□ 0.56
RNF4-215ENST00000511843 HSPA5P11021 654 aaKnown RBP18.55■□□□□ 0.56
RNF4-215ENST00000511843 TOM1L2Q6ZVM7 507 aa18.55■□□□□ 0.56
RNF4-215ENST00000511843 DEFB132Q7Z7B7 95 aa18.55■□□□□ 0.56
RNF4-215ENST00000511843 ABCC6O95255 1503 aa18.54■□□□□ 0.56
RNF4-215ENST00000511843 WDR17Q8IZU2 1322 aa18.54■□□□□ 0.56
RNF4-215ENST00000511843 FBLN1P23142 703 aa18.54■□□□□ 0.56
RNF4-215ENST00000511843 CDCA8Q53HL2 280 aa18.54■□□□□ 0.56
RNF4-215ENST00000511843 CCDC125Q86Z20 511 aa18.54■□□□□ 0.56
RNF4-215ENST00000511843 POLR3GLQ9BT43 218 aa18.54■□□□□ 0.56
RNF4-215ENST00000511843 RGPD2P0DJD1 1756 aa18.53■□□□□ 0.56
RNF4-215ENST00000511843 CSB-PGBD3P0DP91 1061 aa18.53■□□□□ 0.56
RNF4-215ENST00000511843 EIF4G2P78344 907 aaKnown RBP eCLIP18.52■□□□□ 0.56
RNF4-215ENST00000511843 GGNBP2Q9H3C7 697 aa18.52■□□□□ 0.56
RNF4-215ENST00000511843 THRAP3Q9Y2W1 955 aaKnown RBP18.52■□□□□ 0.56
RNF4-215ENST00000511843 COG3Q96JB2 828 aa18.51■□□□□ 0.55
RNF4-215ENST00000511843 SBF2Q86WG5 1849 aa18.51■□□□□ 0.55
RNF4-215ENST00000511843 PEAK1Q9H792 1746 aa18.5■□□□□ 0.55
RNF4-215ENST00000511843 SF3B2Q13435 895 aaKnown RBP18.5■□□□□ 0.55
RNF4-215ENST00000511843 CARD14Q9BXL6 1004 aa18.5■□□□□ 0.55
RNF4-215ENST00000511843 NSD3Q9BZ95 1437 aa18.49■□□□□ 0.55
RNF4-215ENST00000511843 FYB1O15117 783 aa18.49■□□□□ 0.55
RNF4-215ENST00000511843 PDE3BQ13370 1112 aa18.49■□□□□ 0.55
RNF4-215ENST00000511843 ERBB3P21860 1342 aa18.48■□□□□ 0.55
RNF4-215ENST00000511843 MAP3K19Q56UN5 1328 aa18.48■□□□□ 0.55
RNF4-215ENST00000511843 TRIM37O94972 964 aa18.47■□□□□ 0.55
RNF4-215ENST00000511843 ANKRD24Q8TF21 1146 aa18.47■□□□□ 0.55
RNF4-215ENST00000511843 CARD10Q9BWT7 1032 aa18.47■□□□□ 0.55
RNF4-215ENST00000511843 FAM208AQ9UK61 1670 aaKnown RBP18.47■□□□□ 0.55
RNF4-215ENST00000511843 LTV1Q96GA3 475 aaPredicted RBP18.46■□□□□ 0.55
RNF4-215ENST00000511843 NLRP2Q9NX02 1062 aa18.46■□□□□ 0.55
RNF4-215ENST00000511843 DISP2A7MBM2 1401 aa18.46■□□□□ 0.55
RNF4-215ENST00000511843 RRS1Q15050 365 aaKnown RBP18.45■□□□□ 0.54
RNF4-215ENST00000511843 FAM196AQ6ZSG2 479 aa18.45■□□□□ 0.54
RNF4-215ENST00000511843 ANKRD26Q9UPS8 1709 aa18.45■□□□□ 0.54
RNF4-215ENST00000511843 C11orf95C9JLR9 678 aaPredicted RBP18.44■□□□□ 0.54
RNF4-215ENST00000511843 EN1Q05925 392 aaPredicted RBP18.44■□□□□ 0.54
RNF4-215ENST00000511843 DDB1Q16531 1140 aa18.44■□□□□ 0.54
RNF4-215ENST00000511843 IP6K1Q92551 441 aa18.44■□□□□ 0.54
RNF4-215ENST00000511843 MAP2P11137 1827 aaKnown RBP18.44■□□□□ 0.54
RNF4-215ENST00000511843 CCDC7Q96M83 1385 aa18.43■□□□□ 0.54
RNF4-215ENST00000511843 HOXC9P31274 260 aa18.43■□□□□ 0.54
RNF4-215ENST00000511843 BAG6P46379 1132 aa18.43■□□□□ 0.54
RNF4-215ENST00000511843 AMPHP49418 695 aa18.42■□□□□ 0.54
RNF4-215ENST00000511843 OVOS2A0A0G2JMS6 1433 aa18.41■□□□□ 0.54
RNF4-215ENST00000511843 MARCH10Q8NA82 808 aaPredicted RBP18.4■□□□□ 0.54
RNF4-215ENST00000511843 TNS2Q63HR2 1409 aa18.4■□□□□ 0.54
RNF4-215ENST00000511843 KAT6BQ8WYB5 2073 aa18.39■□□□□ 0.53
RNF4-215ENST00000511843 RREB1Q92766 1687 aa18.39■□□□□ 0.53
RNF4-215ENST00000511843 APBA3O96018 575 aa18.39■□□□□ 0.53
RNF4-215ENST00000511843 EZH2Q15910 746 aaKnown RBP18.39■□□□□ 0.53
RNF4-215ENST00000511843 CDCA7Q9BWT1 371 aaPredicted RBP18.39■□□□□ 0.53
RNF4-215ENST00000511843 NUP188Q5SRE5 1749 aa18.38■□□□□ 0.53
RNF4-215ENST00000511843 PTF1AQ7RTS3 328 aa18.38■□□□□ 0.53
RNF4-215ENST00000511843 SHANK3Q9BYB0 1731 aa18.37■□□□□ 0.53
RNF4-215ENST00000511843 PANK3Q9H999 370 aa18.37■□□□□ 0.53
RNF4-215ENST00000511843 RTL1A6NKG5 1358 aa18.37■□□□□ 0.53
RNF4-215ENST00000511843 EXOC5O00471 708 aa18.36■□□□□ 0.53
RNF4-215ENST00000511843 IL2RBP14784 551 aa18.36■□□□□ 0.53
RNF4-215ENST00000511843 CGNL1Q0VF96 1302 aa18.36■□□□□ 0.53
RNF4-215ENST00000511843 HSP90AB2PQ58FF8 381 aa18.35■□□□□ 0.53
RNF4-215ENST00000511843 EMILIN1Q9Y6C2 1016 aa18.35■□□□□ 0.53
RNF4-215ENST00000511843 PSDA5PKW4 1024 aaPredicted RBP18.34■□□□□ 0.53
RNF4-215ENST00000511843 USHBP1Q8N6Y0 703 aa18.34■□□□□ 0.53
RNF4-215ENST00000511843 CAMKK2Q96RR4 588 aa18.34■□□□□ 0.53
RNF4-215ENST00000511843 NHSQ6T4R5 1651 aa18.34■□□□□ 0.53
RNF4-215ENST00000511843 KIF7Q2M1P5 1343 aa18.33■□□□□ 0.53
RNF4-215ENST00000511843 TNNT2P45379 298 aaPredicted RBP18.33■□□□□ 0.52
RNF4-215ENST00000511843 MEGF6O75095 1541 aa18.33■□□□□ 0.52
RNF4-215ENST00000511843 RGPD3A6NKT7 1758 aaPredicted RBP18.32■□□□□ 0.52
RNF4-215ENST00000511843 RGPD4Q7Z3J3 1758 aa18.32■□□□□ 0.52
RNF4-215ENST00000511843 FLT4P35916 1363 aa18.32■□□□□ 0.52
RNF4-215ENST00000511843 PPM1GO15355 546 aaPredicted RBP18.32■□□□□ 0.52
RNF4-215ENST00000511843 NBPF6Q5VWK0 638 aa18.32■□□□□ 0.52
RNF4-215ENST00000511843 NBPF4Q96M43 638 aa18.32■□□□□ 0.52
RNF4-215ENST00000511843 INSRP06213 1382 aa18.31■□□□□ 0.52
RNF4-215ENST00000511843 BTAF1O14981 1849 aa18.31■□□□□ 0.52
RNF4-215ENST00000511843 SMG6Q86US8 1419 aaKnown RBP18.31■□□□□ 0.52
RNF4-215ENST00000511843 DOT1LQ8TEK3 1739 aa18.3■□□□□ 0.52
RNF4-215ENST00000511843 ACSBG1Q96GR2 724 aa18.3■□□□□ 0.52
RNF4-215ENST00000511843 KCNQ2O43526 872 aa18.29■□□□□ 0.52
RNF4-215ENST00000511843 BCL9O00512 1426 aa18.29■□□□□ 0.52
RNF4-215ENST00000511843 R3HDM1Q15032 1099 aaKnown RBP18.28■□□□□ 0.52
RNF4-215ENST00000511843 DDX54Q8TDD1 881 aaKnown RBP18.28■□□□□ 0.52
RNF4-215ENST00000511843 BCL11BQ9C0K0 894 aaPredicted RBP18.28■□□□□ 0.52
RNF4-215ENST00000511843 POLKQ9UBT6 870 aa18.27■□□□□ 0.52
RNF4-215ENST00000511843 SRCAPQ6ZRS2 3230 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms