RNA–Protein interactions for RNA: ENST00000511317.1

DDX60-204, Transcript of DExD/H-box helicase 60, humanhuman

TSL 3

Gene DDX60, Length 618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-204ENST00000511317 PCMTD1Q96MG8 357 aaPredicted RBP12.08□□□□□ -0.48
DDX60-204ENST00000511317 NXF1Q9UBU9 619 aaKnown RBP12.08□□□□□ -0.48
DDX60-204ENST00000511317 WIPF1O43516 503 aa12.07□□□□□ -0.48
DDX60-204ENST00000511317 SCARF1Q14162 830 aa12.07□□□□□ -0.48
DDX60-204ENST00000511317 ADAM32Q8TC27 787 aa12.06□□□□□ -0.48
DDX60-204ENST00000511317 GPSM3Q9Y4H4 160 aa12.06□□□□□ -0.48
DDX60-204ENST00000511317 VEGFBP49765 207 aa12.05□□□□□ -0.48
DDX60-204ENST00000511317 C6orf118Q5T5N4 469 aa12.05□□□□□ -0.48
DDX60-204ENST00000511317 PPP1R26Q5T8A7 1209 aaPredicted RBP12.05□□□□□ -0.48
DDX60-204ENST00000511317 LINC00528Q8N1L1 170 aa12.05□□□□□ -0.48
DDX60-204ENST00000511317 KCTD15Q96SI1 283 aaPredicted RBP12.05□□□□□ -0.48
DDX60-204ENST00000511317 EMILIN1Q9Y6C2 1016 aa12.05□□□□□ -0.48
DDX60-204ENST00000511317 PTK2Q05397 1052 aa12.04□□□□□ -0.48
DDX60-204ENST00000511317 TPRNQ4KMQ1 711 aa12.04□□□□□ -0.48
DDX60-204ENST00000511317 ZBTB33Q86T24 672 aa12.04□□□□□ -0.48
DDX60-204ENST00000511317 SLC10A4Q96EP9 437 aa12.04□□□□□ -0.48
DDX60-204ENST00000511317 GJD4Q96KN9 370 aaPredicted RBP12.04□□□□□ -0.48
DDX60-204ENST00000511317 INTS6LQ5JSJ4 861 aaKnown RBP12.03□□□□□ -0.48
DDX60-204ENST00000511317 H3BM21 787 aa12.02□□□□□ -0.49
DDX60-204ENST00000511317 CBLBQ13191 982 aa12.02□□□□□ -0.49
DDX60-204ENST00000511317 TMEM259Q4ZIN3 620 aa12.02□□□□□ -0.49
DDX60-204ENST00000511317 Q6ZVU0 165 aa12□□□□□ -0.49
DDX60-204ENST00000511317 NPAS3Q8IXF0 933 aa12□□□□□ -0.49
DDX60-204ENST00000511317 CDV3Q9UKY7 258 aaKnown RBP12□□□□□ -0.49
DDX60-204ENST00000511317 ERBB4Q15303 1308 aa12□□□□□ -0.49
DDX60-204ENST00000511317 BMP2P12643 396 aa11.99□□□□□ -0.49
DDX60-204ENST00000511317 SOS2Q07890 1332 aaPredicted RBP11.99□□□□□ -0.49
DDX60-204ENST00000511317 GPR37L1O60883 481 aa11.98□□□□□ -0.49
DDX60-204ENST00000511317 DNMT3LQ9UJW3 386 aa11.98□□□□□ -0.49
DDX60-204ENST00000511317 GMPRP36959 345 aa11.96□□□□□ -0.49
DDX60-204ENST00000511317 TSEN34Q9BSV6 310 aaKnown RBP11.96□□□□□ -0.49
DDX60-204ENST00000511317 SLC16A10Q8TF71 515 aa11.95□□□□□ -0.5
DDX60-204ENST00000511317 TMPRSS4Q9NRS4 437 aa11.95□□□□□ -0.5
DDX60-204ENST00000511317 PGPEP1Q9NXJ5 209 aa11.95□□□□□ -0.5
DDX60-204ENST00000511317 ESPNB1AK53 854 aa11.94□□□□□ -0.5
DDX60-204ENST00000511317 MAN1A2O60476 641 aa11.94□□□□□ -0.5
DDX60-204ENST00000511317 UPP2O95045 317 aa11.94□□□□□ -0.5
DDX60-204ENST00000511317 LORP23490 312 aaPredicted RBP11.94□□□□□ -0.5
DDX60-204ENST00000511317 PNMA1Q8ND90 353 aa11.94□□□□□ -0.5
DDX60-204ENST00000511317 NBPF20Q3BBV1 942 aa11.93□□□□□ -0.5
DDX60-204ENST00000511317 SPINT1O43278 529 aa11.92□□□□□ -0.5
DDX60-204ENST00000511317 FBXO45P0C2W1 286 aa11.92□□□□□ -0.5
DDX60-204ENST00000511317 DHX9Q08211 1270 aaKnown RBP11.92□□□□□ -0.5
DDX60-204ENST00000511317 MTMR14Q8NCE2 650 aa11.92□□□□□ -0.5
DDX60-204ENST00000511317 IRF7Q92985 503 aa11.92□□□□□ -0.5
DDX60-204ENST00000511317 AGBL1Q96MI9 1066 aa11.92□□□□□ -0.5
DDX60-204ENST00000511317 ERVH48-1M5A8F1 160 aa11.91□□□□□ -0.5
DDX60-204ENST00000511317 LILRA1O75019 489 aa11.91□□□□□ -0.5
DDX60-204ENST00000511317 DZIP3Q86Y13 1208 aaKnown RBP11.91□□□□□ -0.5
DDX60-204ENST00000511317 KDF1Q8NAX2 398 aaPredicted RBP11.91□□□□□ -0.5
DDX60-204ENST00000511317 ZNF784Q8NCA9 323 aaPredicted RBP11.91□□□□□ -0.5
DDX60-204ENST00000511317 ZBBXA8MT70 800 aa11.9□□□□□ -0.5
DDX60-204ENST00000511317 VSIG8P0DPA2 414 aa11.9□□□□□ -0.5
DDX60-204ENST00000511317 TTLL8A6PVC2 850 aa11.89□□□□□ -0.51
DDX60-204ENST00000511317 ADD1P35611 737 aaKnown RBP11.89□□□□□ -0.51
DDX60-204ENST00000511317 RAB15P59190 212 aa11.89□□□□□ -0.51
DDX60-204ENST00000511317 BANK1Q8NDB2 785 aa11.89□□□□□ -0.51
DDX60-204ENST00000511317 SNRKQ9NRH2 765 aa11.89□□□□□ -0.51
DDX60-204ENST00000511317 PPFIA3O75145 1194 aa11.88□□□□□ -0.51
DDX60-204ENST00000511317 INSM1Q01101 510 aaPredicted RBP11.88□□□□□ -0.51
DDX60-204ENST00000511317 SOCS7O14512 581 aa11.87□□□□□ -0.51
DDX60-204ENST00000511317 CTSOP43234 321 aaPredicted RBP11.86□□□□□ -0.51
DDX60-204ENST00000511317 RELBQ01201 579 aa11.86□□□□□ -0.51
DDX60-204ENST00000511317 FIGNL2A6NMB9 653 aa11.85□□□□□ -0.51
DDX60-204ENST00000511317 GIGYF1O75420 1035 aaPredicted RBP11.84□□□□□ -0.51
DDX60-204ENST00000511317 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.84□□□□□ -0.51
DDX60-204ENST00000511317 INSM2Q96T92 566 aaPredicted RBP11.84□□□□□ -0.51
DDX60-204ENST00000511317 STK17AQ9UEE5 414 aa11.84□□□□□ -0.51
DDX60-204ENST00000511317 PCDHB9Q9Y5E1 797 aa11.84□□□□□ -0.51
DDX60-204ENST00000511317 ADH1AP07327 375 aa11.83□□□□□ -0.52
DDX60-204ENST00000511317 PTSQ03393 145 aa11.83□□□□□ -0.52
DDX60-204ENST00000511317 SEPT12Q8IYM1 358 aa11.83□□□□□ -0.52
DDX60-204ENST00000511317 ZNF395Q9H8N7 513 aaPredicted RBP11.83□□□□□ -0.52
DDX60-204ENST00000511317 NR1H3Q13133 447 aa11.81□□□□□ -0.52
DDX60-204ENST00000511317 CYLDQ9NQC7 956 aa11.81□□□□□ -0.52
DDX60-204ENST00000511317 FOXD4L5Q5VV16 416 aaPredicted RBP11.8□□□□□ -0.52
DDX60-204ENST00000511317 RNF217Q8TC41 542 aa11.8□□□□□ -0.52
DDX60-204ENST00000511317 PTGIRP43119 386 aa11.79□□□□□ -0.52
DDX60-204ENST00000511317 NDUFB9Q9Y6M9 179 aa11.79□□□□□ -0.52
DDX60-204ENST00000511317 PRKCSHP14314 528 aaPredicted RBP11.78□□□□□ -0.52
DDX60-204ENST00000511317 GPR161Q8N6U8 529 aaKnown RBP11.77□□□□□ -0.53
DDX60-204ENST00000511317 SENP3-EIF4A1A0A087X0R7 540 aa11.76□□□□□ -0.53
DDX60-204ENST00000511317 SLC35F4A4IF30 521 aa11.76□□□□□ -0.53
DDX60-204ENST00000511317 CCDC155Q8N6L0 562 aa11.76□□□□□ -0.53
DDX60-204ENST00000511317 ZSCAN1Q8NBB4 408 aa11.76□□□□□ -0.53
DDX60-204ENST00000511317 POLMQ9NP87 494 aaPredicted RBP11.76□□□□□ -0.53
DDX60-204ENST00000511317 KRT76Q01546 638 aa11.75□□□□□ -0.53
DDX60-204ENST00000511317 SCTRP47872 440 aa11.74□□□□□ -0.53
DDX60-204ENST00000511317 ERVK-9P63128 1117 aa11.74□□□□□ -0.53
DDX60-204ENST00000511317 TBC1D2BQ9UPU7 963 aa11.74□□□□□ -0.53
DDX60-204ENST00000511317 NANOS1Q8WY41 292 aaKnown RBP11.72□□□□□ -0.53
DDX60-204ENST00000511317 IRF5Q13568 498 aa11.71□□□□□ -0.53
DDX60-204ENST00000511317 ITGA6P23229 1130 aa11.69□□□□□ -0.54
DDX60-204ENST00000511317 MCCD1P59942 119 aaPredicted RBP11.69□□□□□ -0.54
DDX60-204ENST00000511317 CC2D2BQ6DHV5 1058 aa11.69□□□□□ -0.54
DDX60-204ENST00000511317 ATP5J2-PTCD1G3V325 749 aa11.68□□□□□ -0.54
DDX60-204ENST00000511317 RNF144AP50876 292 aaPredicted RBP11.68□□□□□ -0.54
DDX60-204ENST00000511317 OSBPL3Q9H4L5 887 aa11.68□□□□□ -0.54
DDX60-204ENST00000511317 APBB1O00213 710 aa11.67□□□□□ -0.54
DDX60-204ENST00000511317 TRAK2O60296 914 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms