RNA–Protein interactions for RNA: ENST00000510500.5

CAST-232, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-232ENST00000510500 RANBP17Q9H2T7 1088 aaKnown RBP9.61□□□□□ -0.87
CAST-232ENST00000510500 GABBR1Q9UBS5 961 aa9.61□□□□□ -0.87
CAST-232ENST00000510500 TBC1D12O60347 775 aa9.61□□□□□ -0.87
CAST-232ENST00000510500 CTR9Q6PD62 1173 aa9.61□□□□□ -0.87
CAST-232ENST00000510500 MNS1Q8NEH6 495 aa9.61□□□□□ -0.87
CAST-232ENST00000510500 FBXO9Q9UK97 447 aaPredicted RBP9.61□□□□□ -0.87
CAST-232ENST00000510500 ZNF330Q9Y3S2 320 aaPredicted RBP9.61□□□□□ -0.87
CAST-232ENST00000510500 CHD1O14646 1710 aa9.6□□□□□ -0.87
CAST-232ENST00000510500 URB2Q14146 1524 aaKnown RBP9.6□□□□□ -0.87
CAST-232ENST00000510500 TLDC2A0PJX2 215 aa9.6□□□□□ -0.87
CAST-232ENST00000510500 CARNS1A5YM72 827 aa9.6□□□□□ -0.87
CAST-232ENST00000510500 STK25O00506 426 aa9.6□□□□□ -0.87
CAST-232ENST00000510500 STK10O94804 968 aaKnown RBP9.6□□□□□ -0.87
CAST-232ENST00000510500 SWAP70Q9UH65 585 aa9.6□□□□□ -0.87
CAST-232ENST00000510500 RAD54L2Q9Y4B4 1467 aa9.6□□□□□ -0.87
CAST-232ENST00000510500 IPO7O95373 1038 aaKnown RBP9.59□□□□□ -0.87
CAST-232ENST00000510500 SWT1Q5T5J6 900 aaKnown RBP9.59□□□□□ -0.87
CAST-232ENST00000510500 SCYL1Q96KG9 808 aa9.59□□□□□ -0.87
CAST-232ENST00000510500 WWC3Q9ULE0 1092 aa9.59□□□□□ -0.87
CAST-232ENST00000510500 CSB-PGBD3P0DP91 1061 aa9.59□□□□□ -0.88
CAST-232ENST00000510500 PDAP1Q13442 181 aaKnown RBP9.59□□□□□ -0.88
CAST-232ENST00000510500 SPACA7Q96KW9 195 aa9.59□□□□□ -0.88
CAST-232ENST00000510500 LARP6Q9BRS8 491 aaKnown RBP9.59□□□□□ -0.88
CAST-232ENST00000510500 BRMS1Q9HCU9 246 aa9.59□□□□□ -0.88
CAST-232ENST00000510500 PAX7P23759 505 aa9.58□□□□□ -0.88
CAST-232ENST00000510500 SF3B2Q13435 895 aaKnown RBP9.58□□□□□ -0.88
CAST-232ENST00000510500 C11orf91Q3C1V1 193 aa9.58□□□□□ -0.88
CAST-232ENST00000510500 CCAR1Q8IX12 1150 aaKnown RBP9.58□□□□□ -0.88
CAST-232ENST00000510500 SPDYE1Q8NFV5 336 aaPredicted RBP9.58□□□□□ -0.88
CAST-232ENST00000510500 MED4Q9NPJ6 270 aa9.58□□□□□ -0.88
CAST-232ENST00000510500 PHF8Q9UPP1 1060 aa9.58□□□□□ -0.88
CAST-232ENST00000510500 IFT140Q96RY7 1462 aa9.58□□□□□ -0.88
CAST-232ENST00000510500 CFAP69A5D8W1 941 aa9.57□□□□□ -0.88
CAST-232ENST00000510500 PPP1R12AO14974 1030 aaPredicted RBP9.57□□□□□ -0.88
CAST-232ENST00000510500 MKRN4PQ13434 485 aaPredicted RBP9.57□□□□□ -0.88
CAST-232ENST00000510500 PBXIP1Q96AQ6 731 aa9.57□□□□□ -0.88
CAST-232ENST00000510500 NRBP1Q9UHY1 535 aa9.57□□□□□ -0.88
CAST-232ENST00000510500 TPX2Q9ULW0 747 aaKnown RBP9.57□□□□□ -0.88
CAST-232ENST00000510500 SMAPO00193 183 aa9.56□□□□□ -0.88
CAST-232ENST00000510500 CAPN2P17655 700 aa9.56□□□□□ -0.88
CAST-232ENST00000510500 JMYQ8N9B5 988 aa9.56□□□□□ -0.88
CAST-232ENST00000510500 PCMTD1Q96MG8 357 aaPredicted RBP9.56□□□□□ -0.88
CAST-232ENST00000510500 DCBLD2Q96PD2 775 aa9.56□□□□□ -0.88
CAST-232ENST00000510500 CGNQ9P2M7 1197 aaKnown RBP9.56□□□□□ -0.88
CAST-232ENST00000510500 KNSTRNQ9Y448 316 aa9.56□□□□□ -0.88
CAST-232ENST00000510500 GPIHBP1Q8IV16 184 aa9.56□□□□□ -0.88
CAST-232ENST00000510500 CCDC146Q8IYE0 955 aa9.56□□□□□ -0.88
CAST-232ENST00000510500 CWC25Q9NXE8 425 aaPredicted RBP9.56□□□□□ -0.88
CAST-232ENST00000510500 ZNF608Q9ULD9 1512 aaPredicted RBP9.56□□□□□ -0.88
CAST-232ENST00000510500 PSMC1P62191 440 aaKnown RBP9.55□□□□□ -0.88
CAST-232ENST00000510500 E2F4Q16254 413 aa9.55□□□□□ -0.88
CAST-232ENST00000510500 BCL2L13Q9BXK5 485 aa9.55□□□□□ -0.88
CAST-232ENST00000510500 TBC1D2Q9BYX2 928 aa9.55□□□□□ -0.88
CAST-232ENST00000510500 TMX4Q9H1E5 349 aaPredicted RBP9.55□□□□□ -0.88
CAST-232ENST00000510500 COG6Q9Y2V7 657 aa9.55□□□□□ -0.88
CAST-232ENST00000510500 PAXBP1Q9Y5B6 917 aa9.55□□□□□ -0.88
CAST-232ENST00000510500 EIF4G3O43432 1585 aaKnown RBP9.55□□□□□ -0.88
CAST-232ENST00000510500 RAD50Q92878 1312 aa9.55□□□□□ -0.88
CAST-232ENST00000510500 CCDC189A1A4V9 331 aa9.54□□□□□ -0.88
CAST-232ENST00000510500 CCDC66A2RUB6 948 aa9.54□□□□□ -0.88
CAST-232ENST00000510500 TRIM6-TRIM34B2RNG4 842 aa9.54□□□□□ -0.88
CAST-232ENST00000510500 IBSPP21815 317 aaPredicted RBP9.54□□□□□ -0.88
CAST-232ENST00000510500 ITGAEP38570 1179 aa9.54□□□□□ -0.88
CAST-232ENST00000510500 CCT2P78371 535 aaKnown RBP9.54□□□□□ -0.88
CAST-232ENST00000510500 HSP90B2PQ58FF3 399 aa9.54□□□□□ -0.88
CAST-232ENST00000510500 ARPC5LQ9BPX5 153 aa9.54□□□□□ -0.88
CAST-232ENST00000510500 TRIM34Q9BYJ4 488 aa9.54□□□□□ -0.88
CAST-232ENST00000510500 LNPKQ9C0E8 428 aa9.54□□□□□ -0.88
CAST-232ENST00000510500 NUCKS1Q9H1E3 243 aaKnown RBP9.54□□□□□ -0.88
CAST-232ENST00000510500 GNEQ9Y223 722 aaKnown RBP9.54□□□□□ -0.88
CAST-232ENST00000510500 CLEC11AQ9Y240 323 aa9.54□□□□□ -0.88
CAST-232ENST00000510500 MROH2BQ7Z745 1585 aa9.54□□□□□ -0.88
CAST-232ENST00000510500 RIPK4P57078 832 aa9.54□□□□□ -0.88
CAST-232ENST00000510500 BIRC2Q13490 618 aa9.54□□□□□ -0.88
CAST-232ENST00000510500 ICE2Q659A1 982 aa9.54□□□□□ -0.88
CAST-232ENST00000510500 ACRBPQ8NEB7 543 aa9.54□□□□□ -0.88
CAST-232ENST00000510500 CFTRP13569 1480 aa9.53□□□□□ -0.88
CAST-232ENST00000510500 POU5F1Q01860 360 aaKnown RBP9.53□□□□□ -0.88
CAST-232ENST00000510500 SDE2Q6IQ49 451 aa9.53□□□□□ -0.88
CAST-232ENST00000510500 VAMP1P23763 118 aa9.52□□□□□ -0.89
CAST-232ENST00000510500 GJC2Q5T442 439 aaPredicted RBP9.52□□□□□ -0.89
CAST-232ENST00000510500 OGFOD1Q8N543 542 aa9.52□□□□□ -0.89
CAST-232ENST00000510500 ERCC4Q92889 916 aaPredicted RBP9.52□□□□□ -0.89
CAST-232ENST00000510500 HOXA2O43364 376 aa9.52□□□□□ -0.89
CAST-232ENST00000510500 TPM3P06753 285 aa9.52□□□□□ -0.89
CAST-232ENST00000510500 NAT1P18440 290 aa9.52□□□□□ -0.89
CAST-232ENST00000510500 KCNJ4P48050 445 aa9.52□□□□□ -0.89
CAST-232ENST00000510500 PIK3R5Q8WYR1 880 aa9.52□□□□□ -0.89
CAST-232ENST00000510500 VRTNQ9H8Y1 702 aa9.52□□□□□ -0.89
CAST-232ENST00000510500 QTRT2Q9H974 415 aaKnown RBP9.52□□□□□ -0.89
CAST-232ENST00000510500 KIF3AQ9Y496 699 aa9.52□□□□□ -0.89
CAST-232ENST00000510500 PRDM2Q13029 1718 aa9.51□□□□□ -0.89
CAST-232ENST00000510500 ANKRD33BA6NCL7 494 aa9.51□□□□□ -0.89
CAST-232ENST00000510500 POTEB2H3BUK9 544 aa9.51□□□□□ -0.89
CAST-232ENST00000510500 ABCD1P33897 745 aa9.51□□□□□ -0.89
CAST-232ENST00000510500 XPCQ01831 940 aaPredicted RBP9.51□□□□□ -0.89
CAST-232ENST00000510500 DZIP3Q86Y13 1208 aaKnown RBP9.51□□□□□ -0.89
CAST-232ENST00000510500 GIPC2Q8TF65 315 aa9.51□□□□□ -0.89
CAST-232ENST00000510500 TIGD1Q96MW7 591 aa9.51□□□□□ -0.89
CAST-232ENST00000510500 RPS6KC1Q96S38 1066 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms