RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 PARP4Q9UKK3 1724 aaKnown RBP26.05■■□□□ 1.76
LSM6-206ENST00000510331 TMF1P82094 1093 aa26.05■■□□□ 1.76
LSM6-206ENST00000510331 KCNH5Q8NCM2 988 aa26.05■■□□□ 1.76
LSM6-206ENST00000510331 CRB1P82279 1406 aa26.05■■□□□ 1.76
LSM6-206ENST00000510331 ANKRD36BQ8N2N9 1353 aa26.04■■□□□ 1.76
LSM6-206ENST00000510331 LRRC37A3O60309 1634 aa26.03■■□□□ 1.76
LSM6-206ENST00000510331 SLC24A1O60721 1099 aa26.03■■□□□ 1.76
LSM6-206ENST00000510331 ARHGEF25Q86VW2 580 aa26.03■■□□□ 1.76
LSM6-206ENST00000510331 RGPD1P0DJD0 1748 aa26.02■■□□□ 1.76
LSM6-206ENST00000510331 TNS1Q9HBL0 1735 aaKnown RBP26.02■■□□□ 1.76
LSM6-206ENST00000510331 FAM182BQ5T319 152 aa26.01■■□□□ 1.75
LSM6-206ENST00000510331 KIF20BQ96Q89 1820 aa26.01■■□□□ 1.75
LSM6-206ENST00000510331 AXIN2Q9Y2T1 843 aa26.01■■□□□ 1.75
LSM6-206ENST00000510331 BARGINQ6ZT62 677 aa26■■□□□ 1.75
LSM6-206ENST00000510331 TCP11L2Q8N4U5 519 aa26■■□□□ 1.75
LSM6-206ENST00000510331 CCDC125Q86Z20 511 aa25.98■■□□□ 1.75
LSM6-206ENST00000510331 WDR17Q8IZU2 1322 aa25.97■■□□□ 1.75
LSM6-206ENST00000510331 THRAP3Q9Y2W1 955 aaKnown RBP25.94■■□□□ 1.74
LSM6-206ENST00000510331 CDCA8Q53HL2 280 aa25.93■■□□□ 1.74
LSM6-206ENST00000510331 TOM1L2Q6ZVM7 507 aa25.93■■□□□ 1.74
LSM6-206ENST00000510331 DEFB132Q7Z7B7 95 aa25.92■■□□□ 1.74
LSM6-206ENST00000510331 PEAK1Q9H792 1746 aa25.91■■□□□ 1.74
LSM6-206ENST00000510331 CSB-PGBD3P0DP91 1061 aa25.9■■□□□ 1.74
LSM6-206ENST00000510331 SF3B2Q13435 895 aaKnown RBP25.89■■□□□ 1.74
LSM6-206ENST00000510331 FAM208AQ9UK61 1670 aaKnown RBP25.89■■□□□ 1.73
LSM6-206ENST00000510331 DISP2A7MBM2 1401 aa25.88■■□□□ 1.73
LSM6-206ENST00000510331 HSPA5P11021 654 aaKnown RBP25.88■■□□□ 1.73
LSM6-206ENST00000510331 NSD3Q9BZ95 1437 aa25.88■■□□□ 1.73
LSM6-206ENST00000510331 ERBB3P21860 1342 aa25.88■■□□□ 1.73
LSM6-206ENST00000510331 COG3Q96JB2 828 aa25.87■■□□□ 1.73
LSM6-206ENST00000510331 EIF4G2P78344 907 aaKnown RBP eCLIP25.86■■□□□ 1.73
LSM6-206ENST00000510331 PDE3BQ13370 1112 aa25.86■■□□□ 1.73
LSM6-206ENST00000510331 CARD10Q9BWT7 1032 aa25.84■■□□□ 1.73
LSM6-206ENST00000510331 GGNBP2Q9H3C7 697 aa25.84■■□□□ 1.73
LSM6-206ENST00000510331 SBF2Q86WG5 1849 aa25.84■■□□□ 1.73
LSM6-206ENST00000510331 FAM196AQ6ZSG2 479 aa25.83■■□□□ 1.73
LSM6-206ENST00000510331 CCDC7Q96M83 1385 aa25.82■■□□□ 1.72
LSM6-206ENST00000510331 OVOS2A0A0G2JMS6 1433 aa25.82■■□□□ 1.72
LSM6-206ENST00000510331 FYB1O15117 783 aa25.82■■□□□ 1.72
LSM6-206ENST00000510331 MAP3K19Q56UN5 1328 aa25.82■■□□□ 1.72
LSM6-206ENST00000510331 RGPD2P0DJD1 1756 aa25.82■■□□□ 1.72
LSM6-206ENST00000510331 TRIM37O94972 964 aa25.81■■□□□ 1.72
LSM6-206ENST00000510331 FBLN1P23142 703 aa25.81■■□□□ 1.72
LSM6-206ENST00000510331 BAG6P46379 1132 aa25.81■■□□□ 1.72
LSM6-206ENST00000510331 ANKRD24Q8TF21 1146 aa25.81■■□□□ 1.72
LSM6-206ENST00000510331 POLR3GLQ9BT43 218 aa25.81■■□□□ 1.72
LSM6-206ENST00000510331 CARD14Q9BXL6 1004 aa25.81■■□□□ 1.72
LSM6-206ENST00000510331 TNS2Q63HR2 1409 aa25.8■■□□□ 1.72
LSM6-206ENST00000510331 ANKRD26Q9UPS8 1709 aa25.8■■□□□ 1.72
LSM6-206ENST00000510331 DDB1Q16531 1140 aa25.79■■□□□ 1.72
LSM6-206ENST00000510331 RREB1Q92766 1687 aa25.79■■□□□ 1.72
LSM6-206ENST00000510331 NLRP2Q9NX02 1062 aa25.78■■□□□ 1.72
LSM6-206ENST00000510331 RTL1A6NKG5 1358 aa25.78■■□□□ 1.72
LSM6-206ENST00000510331 EN1Q05925 392 aaPredicted RBP25.77■■□□□ 1.72
LSM6-206ENST00000510331 IP6K1Q92551 441 aa25.77■■□□□ 1.72
LSM6-206ENST00000510331 CDCA7Q9BWT1 371 aaPredicted RBP25.77■■□□□ 1.72
LSM6-206ENST00000510331 SRCAPQ6ZRS2 3230 aa25.76■■□□□ 1.72
LSM6-206ENST00000510331 HOXC9P31274 260 aa25.76■■□□□ 1.71
LSM6-206ENST00000510331 RRS1Q15050 365 aaKnown RBP25.76■■□□□ 1.71
LSM6-206ENST00000510331 NUP188Q5SRE5 1749 aa25.75■■□□□ 1.71
LSM6-206ENST00000510331 LTV1Q96GA3 475 aaPredicted RBP25.74■■□□□ 1.71
LSM6-206ENST00000510331 RGPD3A6NKT7 1758 aaPredicted RBP25.72■■□□□ 1.71
LSM6-206ENST00000510331 RGPD4Q7Z3J3 1758 aa25.72■■□□□ 1.71
LSM6-206ENST00000510331 AMPHP49418 695 aa25.72■■□□□ 1.71
LSM6-206ENST00000510331 MARCH10Q8NA82 808 aaPredicted RBP25.72■■□□□ 1.71
LSM6-206ENST00000510331 SHANK3Q9BYB0 1731 aa25.7■■□□□ 1.7
LSM6-206ENST00000510331 NHSQ6T4R5 1651 aa25.7■■□□□ 1.7
LSM6-206ENST00000510331 C11orf95C9JLR9 678 aaPredicted RBP25.69■■□□□ 1.7
LSM6-206ENST00000510331 APBA3O96018 575 aa25.69■■□□□ 1.7
LSM6-206ENST00000510331 EZH2Q15910 746 aaKnown RBP25.69■■□□□ 1.7
LSM6-206ENST00000510331 BCL9O00512 1426 aa25.69■■□□□ 1.7
LSM6-206ENST00000510331 CGNL1Q0VF96 1302 aa25.68■■□□□ 1.7
LSM6-206ENST00000510331 IL2RBP14784 551 aa25.68■■□□□ 1.7
LSM6-206ENST00000510331 CAMKK2Q96RR4 588 aa25.67■■□□□ 1.7
LSM6-206ENST00000510331 FLT4P35916 1363 aa25.67■■□□□ 1.7
LSM6-206ENST00000510331 PARD3Q8TEW0 1356 aa25.67■■□□□ 1.7
LSM6-206ENST00000510331 SMG6Q86US8 1419 aaKnown RBP25.66■■□□□ 1.7
LSM6-206ENST00000510331 MAP2P11137 1827 aaKnown RBP25.66■■□□□ 1.7
LSM6-206ENST00000510331 MEGF6O75095 1541 aa25.66■■□□□ 1.7
LSM6-206ENST00000510331 EXOC5O00471 708 aa25.65■■□□□ 1.7
LSM6-206ENST00000510331 PTF1AQ7RTS3 328 aa25.65■■□□□ 1.7
LSM6-206ENST00000510331 EMILIN1Q9Y6C2 1016 aa25.64■■□□□ 1.7
LSM6-206ENST00000510331 INSRP06213 1382 aa25.63■■□□□ 1.69
LSM6-206ENST00000510331 KIF24Q5T7B8 1368 aa25.63■■□□□ 1.69
LSM6-206ENST00000510331 PSDA5PKW4 1024 aaPredicted RBP25.62■■□□□ 1.69
LSM6-206ENST00000510331 PANK3Q9H999 370 aa25.62■■□□□ 1.69
LSM6-206ENST00000510331 HSP90AB2PQ58FF8 381 aa25.61■■□□□ 1.69
LSM6-206ENST00000510331 KIF7Q2M1P5 1343 aa25.61■■□□□ 1.69
LSM6-206ENST00000510331 DOT1LQ8TEK3 1739 aa25.6■■□□□ 1.69
LSM6-206ENST00000510331 USHBP1Q8N6Y0 703 aa25.6■■□□□ 1.69
LSM6-206ENST00000510331 BTAF1O14981 1849 aa25.59■■□□□ 1.69
LSM6-206ENST00000510331 LRP5O75197 1615 aa25.59■■□□□ 1.69
LSM6-206ENST00000510331 NBPF6Q5VWK0 638 aa25.58■■□□□ 1.69
LSM6-206ENST00000510331 NBPF4Q96M43 638 aa25.58■■□□□ 1.69
LSM6-206ENST00000510331 BCL11BQ9C0K0 894 aaPredicted RBP25.58■■□□□ 1.69
LSM6-206ENST00000510331 NSD2O96028 1365 aa25.56■■□□□ 1.68
LSM6-206ENST00000510331 PPM1GO15355 546 aaPredicted RBP25.55■■□□□ 1.68
LSM6-206ENST00000510331 TNNT2P45379 298 aaPredicted RBP25.55■■□□□ 1.68
LSM6-206ENST00000510331 R3HDM1Q15032 1099 aaKnown RBP25.55■■□□□ 1.68
LSM6-206ENST00000510331 ACSBG1Q96GR2 724 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms