RNA–Protein interactions for RNA: ENST00000510060.5

SSBP2-214, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 1,042 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-214ENST00000510060 CCDC116Q8IYX3 515 aa11.14□□□□□ -0.63
SSBP2-214ENST00000510060 SENP2Q9HC62 589 aa11.14□□□□□ -0.63
SSBP2-214ENST00000510060 ATP13A2Q9NQ11 1180 aa11.14□□□□□ -0.63
SSBP2-214ENST00000510060 EMILIN1Q9Y6C2 1016 aa11.14□□□□□ -0.63
SSBP2-214ENST00000510060 TIMP2P16035 220 aa11.13□□□□□ -0.63
SSBP2-214ENST00000510060 NR1H3Q13133 447 aa11.13□□□□□ -0.63
SSBP2-214ENST00000510060 TRIM52Q96A61 297 aa11.13□□□□□ -0.63
SSBP2-214ENST00000510060 NR3C2P08235 984 aa11.12□□□□□ -0.63
SSBP2-214ENST00000510060 FBXO45P0C2W1 286 aa11.12□□□□□ -0.63
SSBP2-214ENST00000510060 KIFC2Q96AC6 838 aa11.12□□□□□ -0.63
SSBP2-214ENST00000510060 PGPEP1Q9NXJ5 209 aa11.12□□□□□ -0.63
SSBP2-214ENST00000510060 ZIC2O95409 532 aaPredicted RBP11.11□□□□□ -0.63
SSBP2-214ENST00000510060 MCM6Q14566 821 aa11.11□□□□□ -0.63
SSBP2-214ENST00000510060 KLF16Q9BXK1 252 aaPredicted RBP11.11□□□□□ -0.63
SSBP2-214ENST00000510060 DACH1Q9UI36 760 aa11.11□□□□□ -0.63
SSBP2-214ENST00000510060 FLIIQ13045 1269 aa11.09□□□□□ -0.63
SSBP2-214ENST00000510060 CCDC125Q86Z20 511 aa11.09□□□□□ -0.63
SSBP2-214ENST00000510060 SEPT12Q8IYM1 358 aa11.09□□□□□ -0.63
SSBP2-214ENST00000510060 GMPR2Q9P2T1 348 aaKnown RBP11.09□□□□□ -0.63
SSBP2-214ENST00000510060 PCDHB9Q9Y5E1 797 aa11.09□□□□□ -0.63
SSBP2-214ENST00000510060 C11orf95C9JLR9 678 aaPredicted RBP11.08□□□□□ -0.64
SSBP2-214ENST00000510060 INTS6LQ5JSJ4 861 aaKnown RBP11.08□□□□□ -0.64
SSBP2-214ENST00000510060 ITPKCQ96DU7 683 aa11.08□□□□□ -0.64
SSBP2-214ENST00000510060 TBC1D2BQ9UPU7 963 aa11.08□□□□□ -0.64
SSBP2-214ENST00000510060 GPR37L1O60883 481 aa11.07□□□□□ -0.64
SSBP2-214ENST00000510060 SCARF1Q14162 830 aa11.07□□□□□ -0.64
SSBP2-214ENST00000510060 PPP1R26Q5T8A7 1209 aaPredicted RBP11.07□□□□□ -0.64
SSBP2-214ENST00000510060 UPP2O95045 317 aa11.06□□□□□ -0.64
SSBP2-214ENST00000510060 TRIM47Q96LD4 638 aa11.06□□□□□ -0.64
SSBP2-214ENST00000510060 ZFAND3Q9H8U3 227 aa11.06□□□□□ -0.64
SSBP2-214ENST00000510060 ESPNB1AK53 854 aa11.05□□□□□ -0.64
SSBP2-214ENST00000510060 RNF20Q5VTR2 975 aa11.05□□□□□ -0.64
SSBP2-214ENST00000510060 MRPL14Q6P1L8 145 aaKnown RBP11.05□□□□□ -0.64
SSBP2-214ENST00000510060 CCDC180Q9P1Z9 1646 aa11.05□□□□□ -0.64
SSBP2-214ENST00000510060 BMP1P13497 986 aa11.04□□□□□ -0.64
SSBP2-214ENST00000510060 TRIM46Q7Z4K8 759 aa11.04□□□□□ -0.64
SSBP2-214ENST00000510060 MEIOBQ8N635 442 aa11.04□□□□□ -0.64
SSBP2-214ENST00000510060 POTECB2RU33 542 aa11.03□□□□□ -0.64
SSBP2-214ENST00000510060 WWC1Q8IX03 1113 aa11.03□□□□□ -0.64
SSBP2-214ENST00000510060 GDPD2Q9HCC8 539 aa11.03□□□□□ -0.64
SSBP2-214ENST00000510060 EIF4G2P78344 907 aaKnown RBP eCLIP11.02□□□□□ -0.65
SSBP2-214ENST00000510060 WASHC4Q2M389 1173 aa11.02□□□□□ -0.65
SSBP2-214ENST00000510060 ABL2P42684 1182 aa11.01□□□□□ -0.65
SSBP2-214ENST00000510060 RAB15P59190 212 aa11.01□□□□□ -0.65
SSBP2-214ENST00000510060 TSEN34Q9BSV6 310 aaKnown RBP11.01□□□□□ -0.65
SSBP2-214ENST00000510060 RAD21O60216 631 aa11□□□□□ -0.65
SSBP2-214ENST00000510060 IRF5Q13568 498 aa10.99□□□□□ -0.65
SSBP2-214ENST00000510060 LINC00528Q8N1L1 170 aa10.99□□□□□ -0.65
SSBP2-214ENST00000510060 ZFP42Q96MM3 310 aa10.99□□□□□ -0.65
SSBP2-214ENST00000510060 ERVH48-1M5A8F1 160 aa10.98□□□□□ -0.65
SSBP2-214ENST00000510060 GIGYF1O75420 1035 aaPredicted RBP10.98□□□□□ -0.65
SSBP2-214ENST00000510060 Q6ZVU0 165 aa10.98□□□□□ -0.65
SSBP2-214ENST00000510060 PURBQ96QR8 312 aaKnown RBP10.98□□□□□ -0.65
SSBP2-214ENST00000510060 BMP2P12643 396 aa10.97□□□□□ -0.65
SSBP2-214ENST00000510060 UBTFP17480 764 aaKnown RBP10.97□□□□□ -0.65
SSBP2-214ENST00000510060 SOX11P35716 441 aa10.97□□□□□ -0.65
SSBP2-214ENST00000510060 COG6Q9Y2V7 657 aa10.97□□□□□ -0.65
SSBP2-214ENST00000510060 SNRPBP14678 240 aaKnown RBP10.96□□□□□ -0.65
SSBP2-214ENST00000510060 ZNF784Q8NCA9 323 aaPredicted RBP10.96□□□□□ -0.65
SSBP2-214ENST00000510060 C6orf118Q5T5N4 469 aa10.95□□□□□ -0.66
SSBP2-214ENST00000510060 TMPRSS4Q9NRS4 437 aa10.95□□□□□ -0.66
SSBP2-214ENST00000510060 CBLBQ13191 982 aa10.94□□□□□ -0.66
SSBP2-214ENST00000510060 VAC14Q08AM6 782 aa10.93□□□□□ -0.66
SSBP2-214ENST00000510060 CEP126Q9P2H0 1117 aa10.93□□□□□ -0.66
SSBP2-214ENST00000510060 ADH1AP07327 375 aa10.92□□□□□ -0.66
SSBP2-214ENST00000510060 ZNF775Q96BV0 537 aaPredicted RBP10.92□□□□□ -0.66
SSBP2-214ENST00000510060 RB1CC1Q8TDY2 1594 aa10.91□□□□□ -0.66
SSBP2-214ENST00000510060 LILRA1O75019 489 aa10.91□□□□□ -0.66
SSBP2-214ENST00000510060 ESF1Q9H501 851 aaKnown RBP10.91□□□□□ -0.66
SSBP2-214ENST00000510060 CYLDQ9NQC7 956 aa10.91□□□□□ -0.66
SSBP2-214ENST00000510060 SPINT1O43278 529 aa10.9□□□□□ -0.66
SSBP2-214ENST00000510060 MAN1A2O60476 641 aa10.9□□□□□ -0.66
SSBP2-214ENST00000510060 SEMA3FQ13275 785 aa10.9□□□□□ -0.66
SSBP2-214ENST00000510060 SLFNL1Q499Z3 407 aa10.9□□□□□ -0.66
SSBP2-214ENST00000510060 CC2D2BQ6DHV5 1058 aa10.9□□□□□ -0.66
SSBP2-214ENST00000510060 PCDHB11Q9Y5F2 797 aa10.9□□□□□ -0.66
SSBP2-214ENST00000510060 ERVK-9P63128 1117 aa10.89□□□□□ -0.67
SSBP2-214ENST00000510060 RELBQ01201 579 aa10.88□□□□□ -0.67
SSBP2-214ENST00000510060 SOS2Q07890 1332 aaPredicted RBP10.87□□□□□ -0.67
SSBP2-214ENST00000510060 TTLL8A6PVC2 850 aa10.87□□□□□ -0.67
SSBP2-214ENST00000510060 POM121Q96HA1 1249 aa10.87□□□□□ -0.67
SSBP2-214ENST00000510060 MYCP01106 439 aaPredicted RBP10.86□□□□□ -0.67
SSBP2-214ENST00000510060 ADD1P35611 737 aaKnown RBP10.86□□□□□ -0.67
SSBP2-214ENST00000510060 PTGIRP43119 386 aa10.86□□□□□ -0.67
SSBP2-214ENST00000510060 CYP2U1Q7Z449 544 aa10.86□□□□□ -0.67
SSBP2-214ENST00000510060 RNF135Q8IUD6 432 aa10.86□□□□□ -0.67
SSBP2-214ENST00000510060 AGBL1Q96MI9 1066 aa10.86□□□□□ -0.67
SSBP2-214ENST00000510060 ATP5J2-PTCD1G3V325 749 aa10.85□□□□□ -0.67
SSBP2-214ENST00000510060 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.85□□□□□ -0.67
SSBP2-214ENST00000510060 NPAS3Q8IXF0 933 aa10.85□□□□□ -0.67
SSBP2-214ENST00000510060 SIRT1Q96EB6 747 aa10.84□□□□□ -0.67
SSBP2-214ENST00000510060 NXF1Q9UBU9 619 aaKnown RBP10.84□□□□□ -0.67
SSBP2-214ENST00000510060 DOLKQ9UPQ8 538 aa10.84□□□□□ -0.67
SSBP2-214ENST00000510060 PHTF2Q8N3S3 785 aa10.83□□□□□ -0.68
SSBP2-214ENST00000510060 POLMQ9NP87 494 aaPredicted RBP10.83□□□□□ -0.68
SSBP2-214ENST00000510060 TERTO14746 1132 aaKnown RBP10.82□□□□□ -0.68
SSBP2-214ENST00000510060 MAP7D1Q3KQU3 841 aa10.82□□□□□ -0.68
SSBP2-214ENST00000510060 SLC16A10Q8TF71 515 aa10.82□□□□□ -0.68
SSBP2-214ENST00000510060 CCDC85AQ96PX6 553 aaPredicted RBP10.82□□□□□ -0.68
SSBP2-214ENST00000510060 ZNF395Q9H8N7 513 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms