RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 GGNBP2Q9H3C7 697 aa18.91■□□□□ 0.62
SNF8-206ENST00000509989 USP35Q9P2H5 1018 aa18.91■□□□□ 0.62
SNF8-206ENST00000509989 SPATA31A1Q5TZJ5 1347 aa18.91■□□□□ 0.62
SNF8-206ENST00000509989 AATKQ6ZMQ8 1374 aa18.91■□□□□ 0.62
SNF8-206ENST00000509989 FYB1O15117 783 aa18.9■□□□□ 0.62
SNF8-206ENST00000509989 ONECUT3O60422 494 aaPredicted RBP18.9■□□□□ 0.62
SNF8-206ENST00000509989 NSD3Q9BZ95 1437 aa18.9■□□□□ 0.62
SNF8-206ENST00000509989 RGPD2P0DJD1 1756 aa18.89■□□□□ 0.61
SNF8-206ENST00000509989 EVA1CP58658 441 aa18.89■□□□□ 0.61
SNF8-206ENST00000509989 CDCA8Q53HL2 280 aa18.89■□□□□ 0.61
SNF8-206ENST00000509989 WNK3Q9BYP7 1800 aa18.88■□□□□ 0.61
SNF8-206ENST00000509989 FAM182BQ5T319 152 aa18.88■□□□□ 0.61
SNF8-206ENST00000509989 KCNH5Q8NCM2 988 aa18.88■□□□□ 0.61
SNF8-206ENST00000509989 EP400Q96L91 3159 aa18.88■□□□□ 0.61
SNF8-206ENST00000509989 KIF7Q2M1P5 1343 aa18.86■□□□□ 0.61
SNF8-206ENST00000509989 PEAK1Q9H792 1746 aa18.86■□□□□ 0.61
SNF8-206ENST00000509989 A0A0G2JS52 829 aa18.85■□□□□ 0.61
SNF8-206ENST00000509989 MYT1Q01538 1121 aa18.85■□□□□ 0.61
SNF8-206ENST00000509989 COG3Q96JB2 828 aa18.84■□□□□ 0.61
SNF8-206ENST00000509989 ANKRD26Q9UPS8 1709 aa18.83■□□□□ 0.61
SNF8-206ENST00000509989 PANK3Q9H999 370 aa18.83■□□□□ 0.6
SNF8-206ENST00000509989 MAP2P11137 1827 aaKnown RBP18.83■□□□□ 0.6
SNF8-206ENST00000509989 CRB1P82279 1406 aa18.83■□□□□ 0.6
SNF8-206ENST00000509989 MAP3K19Q56UN5 1328 aa18.82■□□□□ 0.6
SNF8-206ENST00000509989 RRS1Q15050 365 aaKnown RBP18.82■□□□□ 0.6
SNF8-206ENST00000509989 WDR17Q8IZU2 1322 aa18.81■□□□□ 0.6
SNF8-206ENST00000509989 PARP4Q9UKK3 1724 aaKnown RBP18.81■□□□□ 0.6
SNF8-206ENST00000509989 TOM1L2Q6ZVM7 507 aa18.8■□□□□ 0.6
SNF8-206ENST00000509989 KRT27Q7Z3Y8 459 aa18.8■□□□□ 0.6
SNF8-206ENST00000509989 TCP11L2Q8N4U5 519 aa18.8■□□□□ 0.6
SNF8-206ENST00000509989 LRRC37A3O60309 1634 aa18.8■□□□□ 0.6
SNF8-206ENST00000509989 ABCC6O95255 1503 aa18.79■□□□□ 0.6
SNF8-206ENST00000509989 BARGINQ6ZT62 677 aa18.78■□□□□ 0.6
SNF8-206ENST00000509989 LTV1Q96GA3 475 aaPredicted RBP18.78■□□□□ 0.6
SNF8-206ENST00000509989 ERBB3P21860 1342 aa18.77■□□□□ 0.6
SNF8-206ENST00000509989 WASHC2AQ641Q2 1341 aa18.77■□□□□ 0.6
SNF8-206ENST00000509989 CSB-PGBD3P0DP91 1061 aa18.77■□□□□ 0.6
SNF8-206ENST00000509989 HOXC9P31274 260 aa18.77■□□□□ 0.6
SNF8-206ENST00000509989 ANKRD24Q8TF21 1146 aa18.77■□□□□ 0.6
SNF8-206ENST00000509989 IP6K1Q92551 441 aa18.77■□□□□ 0.6
SNF8-206ENST00000509989 CCDC7Q96M83 1385 aa18.76■□□□□ 0.59
SNF8-206ENST00000509989 FAM208AQ9UK61 1670 aaKnown RBP18.76■□□□□ 0.59
SNF8-206ENST00000509989 EMILIN1Q9Y6C2 1016 aa18.75■□□□□ 0.59
SNF8-206ENST00000509989 DISP2A7MBM2 1401 aa18.74■□□□□ 0.59
SNF8-206ENST00000509989 SBF2Q86WG5 1849 aa18.74■□□□□ 0.59
SNF8-206ENST00000509989 TNS1Q9HBL0 1735 aaKnown RBP18.74■□□□□ 0.59
SNF8-206ENST00000509989 TNNT2P45379 298 aaPredicted RBP18.73■□□□□ 0.59
SNF8-206ENST00000509989 AMPHP49418 695 aa18.73■□□□□ 0.59
SNF8-206ENST00000509989 CARD10Q9BWT7 1032 aa18.73■□□□□ 0.59
SNF8-206ENST00000509989 NLRP2Q9NX02 1062 aa18.73■□□□□ 0.59
SNF8-206ENST00000509989 CGNL1Q0VF96 1302 aa18.73■□□□□ 0.59
SNF8-206ENST00000509989 HSP90AB2PQ58FF8 381 aa18.72■□□□□ 0.59
SNF8-206ENST00000509989 THRAP3Q9Y2W1 955 aaKnown RBP18.72■□□□□ 0.59
SNF8-206ENST00000509989 BLMP54132 1417 aaPredicted RBP18.72■□□□□ 0.59
SNF8-206ENST00000509989 DEFB132Q7Z7B7 95 aa18.71■□□□□ 0.59
SNF8-206ENST00000509989 RGPD1P0DJD0 1748 aa18.69■□□□□ 0.58
SNF8-206ENST00000509989 SHANK3Q9BYB0 1731 aa18.69■□□□□ 0.58
SNF8-206ENST00000509989 PER1O15534 1290 aaPredicted RBP18.69■□□□□ 0.58
SNF8-206ENST00000509989 USHBP1Q8N6Y0 703 aa18.69■□□□□ 0.58
SNF8-206ENST00000509989 NBPF6Q5VWK0 638 aa18.68■□□□□ 0.58
SNF8-206ENST00000509989 PTF1AQ7RTS3 328 aa18.68■□□□□ 0.58
SNF8-206ENST00000509989 NBPF4Q96M43 638 aa18.68■□□□□ 0.58
SNF8-206ENST00000509989 POLKQ9UBT6 870 aa18.68■□□□□ 0.58
SNF8-206ENST00000509989 RTL1A6NKG5 1358 aa18.68■□□□□ 0.58
SNF8-206ENST00000509989 PPM1GO15355 546 aaPredicted RBP18.67■□□□□ 0.58
SNF8-206ENST00000509989 PDE3BQ13370 1112 aa18.67■□□□□ 0.58
SNF8-206ENST00000509989 AMER1Q5JTC6 1135 aaPredicted RBP18.67■□□□□ 0.58
SNF8-206ENST00000509989 MARCH10Q8NA82 808 aaPredicted RBP18.67■□□□□ 0.58
SNF8-206ENST00000509989 CNGB1Q14028 1251 aaPredicted RBP18.66■□□□□ 0.58
SNF8-206ENST00000509989 DDB1Q16531 1140 aa18.66■□□□□ 0.58
SNF8-206ENST00000509989 TRIM37O94972 964 aa18.65■□□□□ 0.58
SNF8-206ENST00000509989 FLT4P35916 1363 aa18.65■□□□□ 0.58
SNF8-206ENST00000509989 MEGF6O75095 1541 aa18.64■□□□□ 0.58
SNF8-206ENST00000509989 KNSTRNQ9Y448 316 aa18.64■□□□□ 0.57
SNF8-206ENST00000509989 INSRP06213 1382 aa18.64■□□□□ 0.57
SNF8-206ENST00000509989 KAT6BQ8WYB5 2073 aa18.63■□□□□ 0.57
SNF8-206ENST00000509989 IL2RBP14784 551 aa18.62■□□□□ 0.57
SNF8-206ENST00000509989 CC2D1BQ5T0F9 858 aaKnown RBP18.62■□□□□ 0.57
SNF8-206ENST00000509989 TNS2Q63HR2 1409 aa18.62■□□□□ 0.57
SNF8-206ENST00000509989 FAM196AQ6ZSG2 479 aa18.61■□□□□ 0.57
SNF8-206ENST00000509989 MORC1Q86VD1 984 aa18.61■□□□□ 0.57
SNF8-206ENST00000509989 NSD2O96028 1365 aa18.6■□□□□ 0.57
SNF8-206ENST00000509989 EN1Q05925 392 aaPredicted RBP18.6■□□□□ 0.57
SNF8-206ENST00000509989 CCDC125Q86Z20 511 aa18.6■□□□□ 0.57
SNF8-206ENST00000509989 OVOS2A0A0G2JMS6 1433 aa18.59■□□□□ 0.57
SNF8-206ENST00000509989 EXOC5O00471 708 aa18.59■□□□□ 0.57
SNF8-206ENST00000509989 CDCA7Q9BWT1 371 aaPredicted RBP18.59■□□□□ 0.57
SNF8-206ENST00000509989 SMG6Q86US8 1419 aaKnown RBP18.58■□□□□ 0.57
SNF8-206ENST00000509989 KIF24Q5T7B8 1368 aa18.58■□□□□ 0.57
SNF8-206ENST00000509989 EIF4A2Q14240 407 aaKnown RBP18.58■□□□□ 0.56
SNF8-206ENST00000509989 KCNQ2O43526 872 aa18.57■□□□□ 0.56
SNF8-206ENST00000509989 EYA1Q99502 592 aa18.57■□□□□ 0.56
SNF8-206ENST00000509989 EZH2Q15910 746 aaKnown RBP18.56■□□□□ 0.56
SNF8-206ENST00000509989 RREB1Q92766 1687 aa18.56■□□□□ 0.56
SNF8-206ENST00000509989 NCAPD2Q15021 1401 aa18.56■□□□□ 0.56
SNF8-206ENST00000509989 DOT1LQ8TEK3 1739 aa18.55■□□□□ 0.56
SNF8-206ENST00000509989 NHSQ6T4R5 1651 aa18.55■□□□□ 0.56
SNF8-206ENST00000509989 APBA3O96018 575 aa18.55■□□□□ 0.56
SNF8-206ENST00000509989 SF3B2Q13435 895 aaKnown RBP18.55■□□□□ 0.56
SNF8-206ENST00000509989 ACSBG1Q96GR2 724 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms