RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 DISP2A7MBM2 1401 aa21.73■■□□□ 1.07
TPM3-219ENST00000509409 NME9Q86XW9 330 aa21.71■■□□□ 1.07
TPM3-219ENST00000509409 TERF2IPQ9NYB0 399 aa21.71■■□□□ 1.07
TPM3-219ENST00000509409 PIK3C2AO00443 1686 aa21.71■■□□□ 1.07
TPM3-219ENST00000509409 NBPF14Q5TI25 921 aa21.7■■□□□ 1.06
TPM3-219ENST00000509409 CDCA7Q9BWT1 371 aaPredicted RBP21.7■■□□□ 1.06
TPM3-219ENST00000509409 CARD10Q9BWT7 1032 aa21.7■■□□□ 1.06
TPM3-219ENST00000509409 ST20-MTHFSA0A0A6YYL1 179 aa21.68■■□□□ 1.06
TPM3-219ENST00000509409 PUS7Q96PZ0 661 aaKnown RBP21.68■■□□□ 1.06
TPM3-219ENST00000509409 PARD3Q8TEW0 1356 aa21.68■■□□□ 1.06
TPM3-219ENST00000509409 EXOC5O00471 708 aa21.67■■□□□ 1.06
TPM3-219ENST00000509409 SLC24A1O60721 1099 aa21.66■■□□□ 1.06
TPM3-219ENST00000509409 OVOS2A0A0G2JMS6 1433 aa21.65■■□□□ 1.06
TPM3-219ENST00000509409 OVOS2A0A0J9YW53 1432 aa21.65■■□□□ 1.06
TPM3-219ENST00000509409 OVOS2Q6IE36 1432 aa21.65■■□□□ 1.06
TPM3-219ENST00000509409 USP31Q70CQ4 1352 aa21.65■■□□□ 1.06
TPM3-219ENST00000509409 MARCH10Q8NA82 808 aaPredicted RBP21.65■■□□□ 1.06
TPM3-219ENST00000509409 AKAP12Q02952 1782 aa21.65■■□□□ 1.06
TPM3-219ENST00000509409 TNS1Q9HBL0 1735 aaKnown RBP21.64■■□□□ 1.06
TPM3-219ENST00000509409 NLRP2Q9NX02 1062 aa21.64■■□□□ 1.05
TPM3-219ENST00000509409 COL18A1P39060 1754 aa21.63■■□□□ 1.05
TPM3-219ENST00000509409 CD163L1Q9NR16 1453 aa21.63■■□□□ 1.05
TPM3-219ENST00000509409 TESK2Q96S53 571 aa21.62■■□□□ 1.05
TPM3-219ENST00000509409 BCL11BQ9C0K0 894 aaPredicted RBP21.62■■□□□ 1.05
TPM3-219ENST00000509409 EDC4Q6P2E9 1401 aaKnown RBP21.62■■□□□ 1.05
TPM3-219ENST00000509409 CCDC7Q96M83 1385 aa21.61■■□□□ 1.05
TPM3-219ENST00000509409 PARP4Q9UKK3 1724 aaKnown RBP21.61■■□□□ 1.05
TPM3-219ENST00000509409 A0A1W2PP64 1363 aa21.61■■□□□ 1.05
TPM3-219ENST00000509409 NFAT5O94916 1531 aa21.6■■□□□ 1.05
TPM3-219ENST00000509409 PLSCR1O15162 318 aa21.6■■□□□ 1.05
TPM3-219ENST00000509409 ANKRD24Q8TF21 1146 aa21.6■■□□□ 1.05
TPM3-219ENST00000509409 PTF1AQ7RTS3 328 aa21.58■■□□□ 1.05
TPM3-219ENST00000509409 ERBB3P21860 1342 aa21.57■■□□□ 1.04
TPM3-219ENST00000509409 TMF1P82094 1093 aa21.57■■□□□ 1.04
TPM3-219ENST00000509409 COG3Q96JB2 828 aa21.57■■□□□ 1.04
TPM3-219ENST00000509409 MON2Q7Z3U7 1717 aa21.56■■□□□ 1.04
TPM3-219ENST00000509409 LTV1Q96GA3 475 aaPredicted RBP21.56■■□□□ 1.04
TPM3-219ENST00000509409 NINLQ9Y2I6 1382 aa21.56■■□□□ 1.04
TPM3-219ENST00000509409 LRP5O75197 1615 aa21.55■■□□□ 1.04
TPM3-219ENST00000509409 IL2RBP14784 551 aa21.55■■□□□ 1.04
TPM3-219ENST00000509409 IP6K1Q92551 441 aa21.54■■□□□ 1.04
TPM3-219ENST00000509409 LRRC37A3O60309 1634 aa21.54■■□□□ 1.04
TPM3-219ENST00000509409 RGPD5Q99666 1765 aa21.53■■□□□ 1.04
TPM3-219ENST00000509409 ACSBG1Q96GR2 724 aa21.53■■□□□ 1.04
TPM3-219ENST00000509409 ABCC6O95255 1503 aa21.52■■□□□ 1.04
TPM3-219ENST00000509409 AMPHP49418 695 aa21.52■■□□□ 1.04
TPM3-219ENST00000509409 PCGF6Q9BYE7 350 aa21.52■■□□□ 1.04
TPM3-219ENST00000509409 KCNQ2O43526 872 aa21.51■■□□□ 1.03
TPM3-219ENST00000509409 FBLN1P23142 703 aa21.51■■□□□ 1.03
TPM3-219ENST00000509409 BCL9O00512 1426 aa21.51■■□□□ 1.03
TPM3-219ENST00000509409 USP47Q96K76 1375 aa21.5■■□□□ 1.03
TPM3-219ENST00000509409 PEAK1Q9H792 1746 aa21.5■■□□□ 1.03
TPM3-219ENST00000509409 CDCA8Q53HL2 280 aa21.5■■□□□ 1.03
TPM3-219ENST00000509409 PROM2Q8N271 834 aa21.5■■□□□ 1.03
TPM3-219ENST00000509409 SPON1Q9HCB6 807 aa21.5■■□□□ 1.03
TPM3-219ENST00000509409 PPP1R1BQ9UD71 204 aaPredicted RBP21.49■■□□□ 1.03
TPM3-219ENST00000509409 TXNRD1Q16881 649 aa21.48■■□□□ 1.03
TPM3-219ENST00000509409 ANKRD36BQ8N2N9 1353 aa21.48■■□□□ 1.03
TPM3-219ENST00000509409 TNS2Q63HR2 1409 aa21.47■■□□□ 1.03
TPM3-219ENST00000509409 RREB1Q92766 1687 aa21.47■■□□□ 1.03
TPM3-219ENST00000509409 DDX54Q8TDD1 881 aaKnown RBP21.47■■□□□ 1.03
TPM3-219ENST00000509409 GGNBP2Q9H3C7 697 aa21.47■■□□□ 1.03
TPM3-219ENST00000509409 ANO8Q9HCE9 1232 aaPredicted RBP21.47■■□□□ 1.03
TPM3-219ENST00000509409 MAP3K19Q56UN5 1328 aa21.47■■□□□ 1.03
TPM3-219ENST00000509409 NUP188Q5SRE5 1749 aa21.46■■□□□ 1.03
TPM3-219ENST00000509409 HOXC9P31274 260 aa21.46■■□□□ 1.03
TPM3-219ENST00000509409 STK32BQ9NY57 414 aa21.46■■□□□ 1.03
TPM3-219ENST00000509409 FYB1O15117 783 aa21.45■■□□□ 1.02
TPM3-219ENST00000509409 TIMELESSQ9UNS1 1208 aa21.45■■□□□ 1.02
TPM3-219ENST00000509409 USP54Q70EL1 1684 aa21.44■■□□□ 1.02
TPM3-219ENST00000509409 RRS1Q15050 365 aaKnown RBP21.44■■□□□ 1.02
TPM3-219ENST00000509409 WNK3Q9BYP7 1800 aa21.43■■□□□ 1.02
TPM3-219ENST00000509409 SBF2Q86WG5 1849 aa21.43■■□□□ 1.02
TPM3-219ENST00000509409 LTN1O94822 1766 aa21.42■■□□□ 1.02
TPM3-219ENST00000509409 SLC15A2Q16348 729 aa21.41■■□□□ 1.02
TPM3-219ENST00000509409 ZBTB7AO95365 584 aa21.4■■□□□ 1.02
TPM3-219ENST00000509409 PDGFDQ9GZP0 370 aaPredicted RBP21.39■■□□□ 1.01
TPM3-219ENST00000509409 ZCRB1Q8TBF4 217 aaKnown RBP21.38■■□□□ 1.01
TPM3-219ENST00000509409 SYTL4Q96C24 671 aaPredicted RBP21.38■■□□□ 1.01
TPM3-219ENST00000509409 ATF5Q9Y2D1 282 aaPredicted RBP21.38■■□□□ 1.01
TPM3-219ENST00000509409 CLSPNQ9HAW4 1339 aa21.37■■□□□ 1.01
TPM3-219ENST00000509409 DCAF8L1A6NGE4 600 aa21.37■■□□□ 1.01
TPM3-219ENST00000509409 POLR3GLQ9BT43 218 aa21.37■■□□□ 1.01
TPM3-219ENST00000509409 NBPF6Q5VWK0 638 aa21.36■■□□□ 1.01
TPM3-219ENST00000509409 NBPF4Q96M43 638 aa21.36■■□□□ 1.01
TPM3-219ENST00000509409 RGPD3A6NKT7 1758 aaPredicted RBP21.36■■□□□ 1.01
TPM3-219ENST00000509409 RGPD4Q7Z3J3 1758 aa21.36■■□□□ 1.01
TPM3-219ENST00000509409 USHBP1Q8N6Y0 703 aa21.35■■□□□ 1.01
TPM3-219ENST00000509409 CARD14Q9BXL6 1004 aa21.35■■□□□ 1.01
TPM3-219ENST00000509409 RTL1A6NKG5 1358 aa21.35■■□□□ 1.01
TPM3-219ENST00000509409 PRIM1P49642 420 aaKnown RBP21.34■■□□□ 1.01
TPM3-219ENST00000509409 RAPGEF4Q8WZA2 1011 aa21.34■■□□□ 1.01
TPM3-219ENST00000509409 SMG6Q86US8 1419 aaKnown RBP21.33■■□□□ 1.01
TPM3-219ENST00000509409 HSP90AB2PQ58FF8 381 aa21.33■■□□□ 1.01
TPM3-219ENST00000509409 KAT6BQ8WYB5 2073 aa21.32■■□□□ 1
TPM3-219ENST00000509409 TATP17735 454 aaPredicted RBP21.32■■□□□ 1
TPM3-219ENST00000509409 PPM1GO15355 546 aaPredicted RBP21.31■■□□□ 1
TPM3-219ENST00000509409 LRRC4BQ9NT99 713 aa21.31■■□□□ 1
TPM3-219ENST00000509409 NSD3Q9BZ95 1437 aa21.3■■□□□ 1
TPM3-219ENST00000509409 CCER1Q8TC90 406 aaPredicted RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms