RNA–Protein interactions for RNA: ENST00000509227.1

PAPD4-212, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 4

Gene PAPD4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-212ENST00000509227 MTMR2Q13614 643 aa9.68□□□□□ -0.86
PAPD4-212ENST00000509227 BPHLQ86WA6 291 aaPredicted RBP9.68□□□□□ -0.86
PAPD4-212ENST00000509227 KRI1Q8N9T8 703 aaKnown RBP9.68□□□□□ -0.86
PAPD4-212ENST00000509227 GALNT6Q8NCL4 622 aa9.68□□□□□ -0.86
PAPD4-212ENST00000509227 SPINT1O43278 529 aa9.67□□□□□ -0.86
PAPD4-212ENST00000509227 AGERQ15109 404 aa9.67□□□□□ -0.86
PAPD4-212ENST00000509227 BCANQ96GW7 911 aa9.67□□□□□ -0.86
PAPD4-212ENST00000509227 NDUFV2P19404 249 aa9.66□□□□□ -0.86
PAPD4-212ENST00000509227 FSHRP23945 695 aa9.66□□□□□ -0.86
PAPD4-212ENST00000509227 PARP9Q8IXQ6 854 aa9.66□□□□□ -0.86
PAPD4-212ENST00000509227 SPIRE2Q8WWL2 714 aa9.66□□□□□ -0.86
PAPD4-212ENST00000509227 MAP4K5Q9Y4K4 846 aa9.66□□□□□ -0.86
PAPD4-212ENST00000509227 F12P00748 615 aaPredicted RBP9.65□□□□□ -0.86
PAPD4-212ENST00000509227 BEND7Q8N7W2 519 aaPredicted RBP9.64□□□□□ -0.87
PAPD4-212ENST00000509227 C1QTNF2Q9BXJ5 285 aa9.64□□□□□ -0.87
PAPD4-212ENST00000509227 CNTNAP5Q8WYK1 1306 aa9.63□□□□□ -0.87
PAPD4-212ENST00000509227 MOXD2PA6NHM9 499 aa9.63□□□□□ -0.87
PAPD4-212ENST00000509227 Q6ZVU0 165 aa9.63□□□□□ -0.87
PAPD4-212ENST00000509227 KRTAP1-3Q8IUG1 177 aa9.63□□□□□ -0.87
PAPD4-212ENST00000509227 CCDC116Q8IYX3 515 aa9.63□□□□□ -0.87
PAPD4-212ENST00000509227 MAP10Q9P2G4 905 aa9.63□□□□□ -0.87
PAPD4-212ENST00000509227 AMHR2Q16671 573 aa9.62□□□□□ -0.87
PAPD4-212ENST00000509227 GIGYF2Q6Y7W6 1299 aaKnown RBP9.61□□□□□ -0.87
PAPD4-212ENST00000509227 SH3RF1Q7Z6J0 888 aa9.61□□□□□ -0.87
PAPD4-212ENST00000509227 VASH1Q7L8A9 365 aaPredicted RBP9.6□□□□□ -0.87
PAPD4-212ENST00000509227 PODNQ7Z5L7 613 aa9.6□□□□□ -0.87
PAPD4-212ENST00000509227 TRMT44Q8IYL2 757 aaKnown RBP9.6□□□□□ -0.87
PAPD4-212ENST00000509227 GPBP1L1Q9HC44 474 aaPredicted RBP9.6□□□□□ -0.87
PAPD4-212ENST00000509227 SSTR3P32745 418 aaPredicted RBP9.59□□□□□ -0.87
PAPD4-212ENST00000509227 GAS6Q14393 721 aa9.59□□□□□ -0.87
PAPD4-212ENST00000509227 PDE4DQ08499 809 aa9.58□□□□□ -0.88
PAPD4-212ENST00000509227 TTLL12Q14166 644 aaPredicted RBP9.58□□□□□ -0.88
PAPD4-212ENST00000509227 SENP3-EIF4A1A0A087X0R7 540 aa9.57□□□□□ -0.88
PAPD4-212ENST00000509227 PRKCSHP14314 528 aaPredicted RBP9.57□□□□□ -0.88
PAPD4-212ENST00000509227 BAG6P46379 1132 aa9.57□□□□□ -0.88
PAPD4-212ENST00000509227 CBLBQ13191 982 aa9.57□□□□□ -0.88
PAPD4-212ENST00000509227 PGPEP1Q9NXJ5 209 aa9.57□□□□□ -0.88
PAPD4-212ENST00000509227 GJA5P36382 358 aa9.56□□□□□ -0.88
PAPD4-212ENST00000509227 AK7Q96M32 723 aa9.56□□□□□ -0.88
PAPD4-212ENST00000509227 CFAP99D6REC4 459 aa9.55□□□□□ -0.88
PAPD4-212ENST00000509227 PPP1R26Q5T8A7 1209 aaPredicted RBP9.55□□□□□ -0.88
PAPD4-212ENST00000509227 CTSOP43234 321 aaPredicted RBP9.54□□□□□ -0.88
PAPD4-212ENST00000509227 FBXO31Q5XUX0 539 aaPredicted RBP9.54□□□□□ -0.88
PAPD4-212ENST00000509227 ARMC2Q8NEN0 867 aa9.54□□□□□ -0.88
PAPD4-212ENST00000509227 NEDD1Q8NHV4 660 aa9.53□□□□□ -0.88
PAPD4-212ENST00000509227 MBIPQ9NS73 344 aa9.53□□□□□ -0.88
PAPD4-212ENST00000509227 BCRP11274 1271 aa9.52□□□□□ -0.89
PAPD4-212ENST00000509227 RNF217Q8TC41 542 aa9.52□□□□□ -0.89
PAPD4-212ENST00000509227 BEGAINQ9BUH8 593 aa9.52□□□□□ -0.89
PAPD4-212ENST00000509227 TPRNQ4KMQ1 711 aa9.51□□□□□ -0.89
PAPD4-212ENST00000509227 SH3BP5LQ7L8J4 393 aa9.51□□□□□ -0.89
PAPD4-212ENST00000509227 NBPF14Q5TI25 921 aa9.5□□□□□ -0.89
PAPD4-212ENST00000509227 INSM2Q96T92 566 aaPredicted RBP9.5□□□□□ -0.89
PAPD4-212ENST00000509227 LRRC4BQ9NT99 713 aa9.5□□□□□ -0.89
PAPD4-212ENST00000509227 FURINP09958 794 aa9.49□□□□□ -0.89
PAPD4-212ENST00000509227 POLMQ9NP87 494 aaPredicted RBP9.49□□□□□ -0.89
PAPD4-212ENST00000509227 CUEDC1Q9NWM3 386 aaPredicted RBP9.49□□□□□ -0.89
PAPD4-212ENST00000509227 PCDHB15Q9Y5E8 787 aa9.49□□□□□ -0.89
PAPD4-212ENST00000509227 IGF1RP08069 1367 aa9.49□□□□□ -0.89
PAPD4-212ENST00000509227 RSBN1LQ6PCB5 846 aaPredicted RBP9.48□□□□□ -0.89
PAPD4-212ENST00000509227 MAGEB6P1A0A0J9YX57 407 aa9.47□□□□□ -0.89
PAPD4-212ENST00000509227 KRBA1A5PL33 1030 aa9.47□□□□□ -0.89
PAPD4-212ENST00000509227 PER1O15534 1290 aaPredicted RBP9.47□□□□□ -0.89
PAPD4-212ENST00000509227 HRCP23327 699 aa9.47□□□□□ -0.89
PAPD4-212ENST00000509227 LCE3BQ5TA77 95 aa9.47□□□□□ -0.89
PAPD4-212ENST00000509227 AGBL1Q96MI9 1066 aa9.47□□□□□ -0.89
PAPD4-212ENST00000509227 TBC1D2Q9BYX2 928 aa9.47□□□□□ -0.89
PAPD4-212ENST00000509227 ZBTB3Q9H5J0 574 aa9.47□□□□□ -0.89
PAPD4-212ENST00000509227 RELBQ01201 579 aa9.46□□□□□ -0.9
PAPD4-212ENST00000509227 ALYREFQ86V81 257 aaKnown RBP9.46□□□□□ -0.9
PAPD4-212ENST00000509227 GMCL1Q96IK5 515 aa9.46□□□□□ -0.9
PAPD4-212ENST00000509227 FAM117AQ9C073 453 aa9.46□□□□□ -0.9
PAPD4-212ENST00000509227 LIMD1Q9UGP4 676 aa9.46□□□□□ -0.9
PAPD4-212ENST00000509227 DHX9Q08211 1270 aaKnown RBP9.45□□□□□ -0.9
PAPD4-212ENST00000509227 ERFEQ4G0M1 354 aa9.45□□□□□ -0.9
PAPD4-212ENST00000509227 ACDQ96AP0 544 aa9.45□□□□□ -0.9
PAPD4-212ENST00000509227 DIXDC1Q155Q3 683 aa9.44□□□□□ -0.9
PAPD4-212ENST00000509227 PRPF38BQ5VTL8 546 aaKnown RBP9.44□□□□□ -0.9
PAPD4-212ENST00000509227 CABLES1Q8TDN4 633 aa9.43□□□□□ -0.9
PAPD4-212ENST00000509227 ZNF837Q96EG3 531 aaPredicted RBP9.43□□□□□ -0.9
PAPD4-212ENST00000509227 KRTAP4-12Q9BQ66 201 aa9.43□□□□□ -0.9
PAPD4-212ENST00000509227 KDM4CQ9H3R0 1056 aa9.43□□□□□ -0.9
PAPD4-212ENST00000509227 MYSM1Q5VVJ2 828 aa9.42□□□□□ -0.9
PAPD4-212ENST00000509227 FOXR1Q6PIV2 292 aa9.42□□□□□ -0.9
PAPD4-212ENST00000509227 TRIM22Q8IYM9 498 aa9.42□□□□□ -0.9
PAPD4-212ENST00000509227 GPKOWQ92917 476 aaPredicted RBP eCLIP9.42□□□□□ -0.9
PAPD4-212ENST00000509227 QPCTQ16769 361 aa9.41□□□□□ -0.9
PAPD4-212ENST00000509227 CSPP1Q1MSJ5 1256 aa9.41□□□□□ -0.9
PAPD4-212ENST00000509227 FOXD4L5Q5VV16 416 aaPredicted RBP9.41□□□□□ -0.9
PAPD4-212ENST00000509227 CARD14Q9BXL6 1004 aa9.41□□□□□ -0.9
PAPD4-212ENST00000509227 ZNF395Q9H8N7 513 aaPredicted RBP9.41□□□□□ -0.9
PAPD4-212ENST00000509227 CDV3Q9UKY7 258 aaKnown RBP9.41□□□□□ -0.9
PAPD4-212ENST00000509227 KCTD15Q96SI1 283 aaPredicted RBP9.4□□□□□ -0.9
PAPD4-212ENST00000509227 GPR25O00155 361 aa9.39□□□□□ -0.91
PAPD4-212ENST00000509227 OIP5O43482 229 aa9.39□□□□□ -0.91
PAPD4-212ENST00000509227 LYSMD3Q7Z3D4 306 aa9.39□□□□□ -0.91
PAPD4-212ENST00000509227 BRPF1P55201 1214 aaPredicted RBP9.38□□□□□ -0.91
PAPD4-212ENST00000509227 SNRPNP63162 240 aaKnown RBP9.38□□□□□ -0.91
PAPD4-212ENST00000509227 PROCA1Q8NCQ7 364 aaPredicted RBP9.37□□□□□ -0.91
PAPD4-212ENST00000509227 POLR3EQ9NVU0 708 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms