RNA–Protein interactions for RNA: ENST00000508912.1

SSBP2-210, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 256 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-210ENST00000508912 ATP7BP35670 1465 aa8.29□□□□□ -1.08
SSBP2-210ENST00000508912 SSH2Q76I76 1423 aa8.29□□□□□ -1.08
SSBP2-210ENST00000508912 ZNF326Q5BKZ1 582 aaKnown RBP8.28□□□□□ -1.08
SSBP2-210ENST00000508912 PRPF38BQ5VTL8 546 aaKnown RBP8.28□□□□□ -1.08
SSBP2-210ENST00000508912 SBF2Q86WG5 1849 aa8.28□□□□□ -1.08
SSBP2-210ENST00000508912 C10orf71Q711Q0 1435 aa8.28□□□□□ -1.08
SSBP2-210ENST00000508912 NRXN1Q9ULB1 1477 aa8.27□□□□□ -1.09
SSBP2-210ENST00000508912 MKRN4PQ13434 485 aaPredicted RBP8.27□□□□□ -1.09
SSBP2-210ENST00000508912 LARP1Q6PKG0 1096 aaKnown RBP8.27□□□□□ -1.09
SSBP2-210ENST00000508912 PARP4Q9UKK3 1724 aaKnown RBP8.26□□□□□ -1.09
SSBP2-210ENST00000508912 PAPPAQ13219 1627 aa8.26□□□□□ -1.09
SSBP2-210ENST00000508912 KIAA0232Q92628 1395 aa8.26□□□□□ -1.09
SSBP2-210ENST00000508912 CHRNA2Q15822 529 aa8.26□□□□□ -1.09
SSBP2-210ENST00000508912 AKT1S1Q96B36 256 aa8.26□□□□□ -1.09
SSBP2-210ENST00000508912 AIDAQ96BJ3 306 aa8.26□□□□□ -1.09
SSBP2-210ENST00000508912 PNPLA7Q6ZV29 1317 aa8.26□□□□□ -1.09
SSBP2-210ENST00000508912 PHRF1Q9P1Y6 1649 aaKnown RBP8.25□□□□□ -1.09
SSBP2-210ENST00000508912 BRD4O60885 1362 aaPredicted RBP8.25□□□□□ -1.09
SSBP2-210ENST00000508912 TOPAZ1Q8N9V7 1692 aa8.25□□□□□ -1.09
SSBP2-210ENST00000508912 DLL1O00548 723 aa8.25□□□□□ -1.09
SSBP2-210ENST00000508912 LBX1P52954 281 aa8.25□□□□□ -1.09
SSBP2-210ENST00000508912 POLA2Q14181 598 aa8.25□□□□□ -1.09
SSBP2-210ENST00000508912 DDB1Q16531 1140 aa8.25□□□□□ -1.09
SSBP2-210ENST00000508912 TNRC18O15417 2968 aaPredicted RBP8.24□□□□□ -1.09
SSBP2-210ENST00000508912 MARCH10Q8NA82 808 aaPredicted RBP8.24□□□□□ -1.09
SSBP2-210ENST00000508912 PXDNLA1KZ92 1463 aa8.24□□□□□ -1.09
SSBP2-210ENST00000508912 ANKRD30AQ9BXX3 1397 aa8.23□□□□□ -1.09
SSBP2-210ENST00000508912 SPDYE4A6NLX3 237 aa8.23□□□□□ -1.09
SSBP2-210ENST00000508912 WAPLQ7Z5K2 1190 aa8.23□□□□□ -1.09
SSBP2-210ENST00000508912 CICQ96RK0 1608 aaPredicted RBP8.22□□□□□ -1.09
SSBP2-210ENST00000508912 VGFO15240 615 aaPredicted RBP8.22□□□□□ -1.09
SSBP2-210ENST00000508912 LRRC4BQ9NT99 713 aa8.22□□□□□ -1.09
SSBP2-210ENST00000508912 WBP1LQ9NX94 342 aa8.22□□□□□ -1.09
SSBP2-210ENST00000508912 FMN2Q9NZ56 1722 aa8.22□□□□□ -1.09
SSBP2-210ENST00000508912 KDM2BQ8NHM5 1336 aa8.22□□□□□ -1.09
SSBP2-210ENST00000508912 C1QBPQ07021 282 aaKnown RBP8.21□□□□□ -1.1
SSBP2-210ENST00000508912 GCC1Q96CN9 775 aa8.21□□□□□ -1.1
SSBP2-210ENST00000508912 RRAGCQ9HB90 399 aa8.21□□□□□ -1.1
SSBP2-210ENST00000508912 TFCP2L1Q9NZI6 479 aa8.21□□□□□ -1.1
SSBP2-210ENST00000508912 IGSF1Q8N6C5 1336 aa8.21□□□□□ -1.1
SSBP2-210ENST00000508912 ABCB7O75027 752 aa8.2□□□□□ -1.1
SSBP2-210ENST00000508912 HSPA8P11142 646 aaKnown RBP8.2□□□□□ -1.1
SSBP2-210ENST00000508912 ZC3H6P61129 1189 aaKnown RBP8.2□□□□□ -1.1
SSBP2-210ENST00000508912 CREBZFQ9NS37 354 aa8.2□□□□□ -1.1
SSBP2-210ENST00000508912 PITPNM2Q9BZ72 1349 aa8.2□□□□□ -1.1
SSBP2-210ENST00000508912 ALS2Q96Q42 1657 aa8.2□□□□□ -1.1
SSBP2-210ENST00000508912 GPRASP1Q5JY77 1395 aa8.2□□□□□ -1.1
SSBP2-210ENST00000508912 ANKRD30BQ9BXX2 1392 aa8.2□□□□□ -1.1
SSBP2-210ENST00000508912 QSER1Q2KHR3 1735 aa8.2□□□□□ -1.1
SSBP2-210ENST00000508912 CFAP44Q96MT7 982 aa8.19□□□□□ -1.1
SSBP2-210ENST00000508912 MKRN1Q9UHC7 482 aaKnown RBP8.19□□□□□ -1.1
SSBP2-210ENST00000508912 CRYBG1Q9Y4K1 1723 aa8.19□□□□□ -1.1
SSBP2-210ENST00000508912 PLEKHG2Q9H7P9 1386 aa8.19□□□□□ -1.1
SSBP2-210ENST00000508912 PDE4DIPQ5VU43 2346 aa8.19□□□□□ -1.1
SSBP2-210ENST00000508912 E9PCH4 1651 aa8.18□□□□□ -1.1
SSBP2-210ENST00000508912 TRPM3Q9HCF6 1732 aaPredicted RBP8.18□□□□□ -1.1
SSBP2-210ENST00000508912 SLC27A3Q5K4L6 730 aa8.18□□□□□ -1.1
SSBP2-210ENST00000508912 CDCA7Q9BWT1 371 aaPredicted RBP8.18□□□□□ -1.1
SSBP2-210ENST00000508912 CRB1P82279 1406 aa8.18□□□□□ -1.1
SSBP2-210ENST00000508912 LRRC37A3O60309 1634 aa8.18□□□□□ -1.1
SSBP2-210ENST00000508912 CHIC2Q9UKJ5 165 aa8.17□□□□□ -1.1
SSBP2-210ENST00000508912 DAPK1P53355 1430 aa8.17□□□□□ -1.1
SSBP2-210ENST00000508912 CLTCL1P53675 1640 aa8.16□□□□□ -1.1
SSBP2-210ENST00000508912 CNTNAP1P78357 1384 aa8.16□□□□□ -1.1
SSBP2-210ENST00000508912 KCPQ6ZWJ8 1503 aa8.16□□□□□ -1.1
SSBP2-210ENST00000508912 ABCC11Q96J66 1382 aa8.16□□□□□ -1.1
SSBP2-210ENST00000508912 HIRIP3Q9BW71 556 aaPredicted RBP8.16□□□□□ -1.1
SSBP2-210ENST00000508912 ACIN1Q9UKV3 1341 aaKnown RBP8.16□□□□□ -1.1
SSBP2-210ENST00000508912 PLEKHH1Q9ULM0 1364 aa8.16□□□□□ -1.1
SSBP2-210ENST00000508912 ANKRD50Q9ULJ7 1429 aa8.15□□□□□ -1.1
SSBP2-210ENST00000508912 CPDO75976 1380 aa8.15□□□□□ -1.1
SSBP2-210ENST00000508912 HABP4Q5JVS0 413 aaKnown RBP8.15□□□□□ -1.1
SSBP2-210ENST00000508912 SIRT1Q96EB6 747 aa8.15□□□□□ -1.1
SSBP2-210ENST00000508912 PAK3O75914 559 aaPredicted RBP8.14□□□□□ -1.11
SSBP2-210ENST00000508912 C9orf131Q5VYM1 1079 aa8.14□□□□□ -1.11
SSBP2-210ENST00000508912 ARHGAP27Q6ZUM4 889 aa8.14□□□□□ -1.11
SSBP2-210ENST00000508912 COL23A1Q86Y22 540 aaPredicted RBP8.14□□□□□ -1.11
SSBP2-210ENST00000508912 STK26Q9P289 416 aa8.14□□□□□ -1.11
SSBP2-210ENST00000508912 COL5A2P05997 1499 aaPredicted RBP8.13□□□□□ -1.11
SSBP2-210ENST00000508912 EXOC5O00471 708 aa8.13□□□□□ -1.11
SSBP2-210ENST00000508912 VEGFAP15692 232 aaPredicted RBP8.13□□□□□ -1.11
SSBP2-210ENST00000508912 VEGFBP49765 207 aa8.13□□□□□ -1.11
SSBP2-210ENST00000508912 MSL1Q68DK7 614 aa8.13□□□□□ -1.11
SSBP2-210ENST00000508912 ANKARQ7Z5J8 1434 aa8.12□□□□□ -1.11
SSBP2-210ENST00000508912 RGPD8O14715 1765 aaPredicted RBP8.12□□□□□ -1.11
SSBP2-210ENST00000508912 LMO7Q8WWI1 1683 aa8.12□□□□□ -1.11
SSBP2-210ENST00000508912 RPGRIP1LQ68CZ1 1315 aa8.12□□□□□ -1.11
SSBP2-210ENST00000508912 MAP2K1Q02750 393 aaPredicted RBP8.12□□□□□ -1.11
SSBP2-210ENST00000508912 MCOLN1Q9GZU1 580 aa8.12□□□□□ -1.11
SSBP2-210ENST00000508912 USP6P35125 1406 aa8.12□□□□□ -1.11
SSBP2-210ENST00000508912 TNRC6CQ9HCJ0 1690 aaKnown RBP8.11□□□□□ -1.11
SSBP2-210ENST00000508912 ACSBG1Q96GR2 724 aa8.11□□□□□ -1.11
SSBP2-210ENST00000508912 FBXO3Q9UK99 471 aa8.11□□□□□ -1.11
SSBP2-210ENST00000508912 NHSQ6T4R5 1651 aa8.11□□□□□ -1.11
SSBP2-210ENST00000508912 TOM1L2Q6ZVM7 507 aa8.1□□□□□ -1.11
SSBP2-210ENST00000508912 SLC17A8Q8NDX2 589 aa8.09□□□□□ -1.11
SSBP2-210ENST00000508912 BCS1LQ9Y276 419 aa8.09□□□□□ -1.11
SSBP2-210ENST00000508912 AKAP12Q02952 1782 aa8.09□□□□□ -1.11
SSBP2-210ENST00000508912 TRPM1Q7Z4N2 1603 aa8.08□□□□□ -1.12
SSBP2-210ENST00000508912 FXR1P51114 621 aaKnown RBP eCLIP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms