RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 WDR17Q8IZU2 1322 aa19.2■□□□□ 0.66
CCHCR1-227ENST00000508852 TRIM37O94972 964 aa19.19■□□□□ 0.66
CCHCR1-227ENST00000508852 USP31Q70CQ4 1352 aa19.19■□□□□ 0.66
CCHCR1-227ENST00000508852 APBA3O96018 575 aa19.18■□□□□ 0.66
CCHCR1-227ENST00000508852 TMC1Q8TDI8 760 aa19.18■□□□□ 0.66
CCHCR1-227ENST00000508852 SRCAPQ6ZRS2 3230 aa19.18■□□□□ 0.66
CCHCR1-227ENST00000508852 LRP5O75197 1615 aa19.18■□□□□ 0.66
CCHCR1-227ENST00000508852 OVOS2A0A0G2JMS6 1433 aa19.17■□□□□ 0.66
CCHCR1-227ENST00000508852 OVOS2A0A0J9YW53 1432 aa19.17■□□□□ 0.66
CCHCR1-227ENST00000508852 OVOS2Q6IE36 1432 aa19.17■□□□□ 0.66
CCHCR1-227ENST00000508852 EDC4Q6P2E9 1401 aaKnown RBP19.17■□□□□ 0.66
CCHCR1-227ENST00000508852 DDB1Q16531 1140 aa19.16■□□□□ 0.66
CCHCR1-227ENST00000508852 CARD10Q9BWT7 1032 aa19.16■□□□□ 0.66
CCHCR1-227ENST00000508852 NFAT5O94916 1531 aa19.15■□□□□ 0.66
CCHCR1-227ENST00000508852 CSB-PGBD3P0DP91 1061 aa19.15■□□□□ 0.66
CCHCR1-227ENST00000508852 CAMKK2Q96RR4 588 aa19.15■□□□□ 0.66
CCHCR1-227ENST00000508852 WNK3Q9BYP7 1800 aa19.15■□□□□ 0.66
CCHCR1-227ENST00000508852 RGPD5Q99666 1765 aa19.14■□□□□ 0.66
CCHCR1-227ENST00000508852 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.14■□□□□ 0.65
CCHCR1-227ENST00000508852 AXIN2Q9Y2T1 843 aa19.14■□□□□ 0.65
CCHCR1-227ENST00000508852 CCDC7Q96M83 1385 aa19.14■□□□□ 0.65
CCHCR1-227ENST00000508852 EZH2Q15910 746 aaKnown RBP19.13■□□□□ 0.65
CCHCR1-227ENST00000508852 NBPF14Q5TI25 921 aa19.13■□□□□ 0.65
CCHCR1-227ENST00000508852 CD163L1Q9NR16 1453 aa19.13■□□□□ 0.65
CCHCR1-227ENST00000508852 LRRC37A3O60309 1634 aa19.12■□□□□ 0.65
CCHCR1-227ENST00000508852 SOX12O15370 315 aa19.12■□□□□ 0.65
CCHCR1-227ENST00000508852 SLC12A5Q9H2X9 1139 aa19.12■□□□□ 0.65
CCHCR1-227ENST00000508852 TIMELESSQ9UNS1 1208 aa19.12■□□□□ 0.65
CCHCR1-227ENST00000508852 RGPD3A6NKT7 1758 aaPredicted RBP19.11■□□□□ 0.65
CCHCR1-227ENST00000508852 RGPD4Q7Z3J3 1758 aa19.11■□□□□ 0.65
CCHCR1-227ENST00000508852 RREB1Q92766 1687 aa19.11■□□□□ 0.65
CCHCR1-227ENST00000508852 BCL9O00512 1426 aa19.1■□□□□ 0.65
CCHCR1-227ENST00000508852 ST20-MTHFSA0A0A6YYL1 179 aa19.1■□□□□ 0.65
CCHCR1-227ENST00000508852 LTN1O94822 1766 aa19.1■□□□□ 0.65
CCHCR1-227ENST00000508852 PEAK1Q9H792 1746 aa19.1■□□□□ 0.65
CCHCR1-227ENST00000508852 SBF2Q86WG5 1849 aa19.09■□□□□ 0.65
CCHCR1-227ENST00000508852 PSDA5PKW4 1024 aaPredicted RBP19.09■□□□□ 0.65
CCHCR1-227ENST00000508852 EXOC5O00471 708 aa19.09■□□□□ 0.65
CCHCR1-227ENST00000508852 CDCA8Q53HL2 280 aa19.09■□□□□ 0.65
CCHCR1-227ENST00000508852 TESK2Q96S53 571 aa19.09■□□□□ 0.65
CCHCR1-227ENST00000508852 A0A1W2PP64 1363 aa19.08■□□□□ 0.65
CCHCR1-227ENST00000508852 CLSPNQ9HAW4 1339 aa19.08■□□□□ 0.65
CCHCR1-227ENST00000508852 PLSCR1O15162 318 aa19.08■□□□□ 0.64
CCHCR1-227ENST00000508852 R3HDM1Q15032 1099 aaKnown RBP19.08■□□□□ 0.64
CCHCR1-227ENST00000508852 NME9Q86XW9 330 aa19.08■□□□□ 0.64
CCHCR1-227ENST00000508852 TMF1P82094 1093 aa19.07■□□□□ 0.64
CCHCR1-227ENST00000508852 BCL11BQ9C0K0 894 aaPredicted RBP19.07■□□□□ 0.64
CCHCR1-227ENST00000508852 ERBB3P21860 1342 aa19.06■□□□□ 0.64
CCHCR1-227ENST00000508852 NUP188Q5SRE5 1749 aa19.05■□□□□ 0.64
CCHCR1-227ENST00000508852 COG3Q96JB2 828 aa19.04■□□□□ 0.64
CCHCR1-227ENST00000508852 FAM208AQ9UK61 1670 aaKnown RBP19.04■□□□□ 0.64
CCHCR1-227ENST00000508852 MARCH10Q8NA82 808 aaPredicted RBP19.03■□□□□ 0.64
CCHCR1-227ENST00000508852 NLRP2Q9NX02 1062 aa19.03■□□□□ 0.64
CCHCR1-227ENST00000508852 ANKRD36BQ8N2N9 1353 aa19.03■□□□□ 0.64
CCHCR1-227ENST00000508852 USP47Q96K76 1375 aa19.03■□□□□ 0.64
CCHCR1-227ENST00000508852 TNS2Q63HR2 1409 aa19.02■□□□□ 0.64
CCHCR1-227ENST00000508852 IL2RBP14784 551 aa19.01■□□□□ 0.63
CCHCR1-227ENST00000508852 ANKRD24Q8TF21 1146 aa19.01■□□□□ 0.63
CCHCR1-227ENST00000508852 IP6K1Q92551 441 aa19.01■□□□□ 0.63
CCHCR1-227ENST00000508852 AMPHP49418 695 aa18.96■□□□□ 0.63
CCHCR1-227ENST00000508852 RTL1A6NKG5 1358 aa18.95■□□□□ 0.62
CCHCR1-227ENST00000508852 NHSQ6T4R5 1651 aa18.95■□□□□ 0.62
CCHCR1-227ENST00000508852 SPON1Q9HCB6 807 aa18.94■□□□□ 0.62
CCHCR1-227ENST00000508852 HOXC9P31274 260 aa18.92■□□□□ 0.62
CCHCR1-227ENST00000508852 MAP3K19Q56UN5 1328 aa18.92■□□□□ 0.62
CCHCR1-227ENST00000508852 KIF24Q5T7B8 1368 aa18.92■□□□□ 0.62
CCHCR1-227ENST00000508852 SMG6Q86US8 1419 aaKnown RBP18.91■□□□□ 0.62
CCHCR1-227ENST00000508852 KIF20BQ96Q89 1820 aa18.91■□□□□ 0.62
CCHCR1-227ENST00000508852 FYB1O15117 783 aa18.91■□□□□ 0.62
CCHCR1-227ENST00000508852 KCNQ2O43526 872 aa18.91■□□□□ 0.62
CCHCR1-227ENST00000508852 KAT6BQ8WYB5 2073 aa18.91■□□□□ 0.62
CCHCR1-227ENST00000508852 TXNRD1Q16881 649 aa18.9■□□□□ 0.62
CCHCR1-227ENST00000508852 STK32BQ9NY57 414 aa18.9■□□□□ 0.62
CCHCR1-227ENST00000508852 CGNL1Q0VF96 1302 aa18.9■□□□□ 0.62
CCHCR1-227ENST00000508852 LTV1Q96GA3 475 aaPredicted RBP18.89■□□□□ 0.61
CCHCR1-227ENST00000508852 PCGF6Q9BYE7 350 aa18.89■□□□□ 0.61
CCHCR1-227ENST00000508852 PPP1R1BQ9UD71 204 aaPredicted RBP18.89■□□□□ 0.61
CCHCR1-227ENST00000508852 HMGB2P26583 209 aaKnown RBP18.87■□□□□ 0.61
CCHCR1-227ENST00000508852 PTF1AQ7RTS3 328 aa18.87■□□□□ 0.61
CCHCR1-227ENST00000508852 PROM2Q8N271 834 aa18.87■□□□□ 0.61
CCHCR1-227ENST00000508852 DCAF8L1A6NGE4 600 aa18.86■□□□□ 0.61
CCHCR1-227ENST00000508852 GGNBP2Q9H3C7 697 aa18.86■□□□□ 0.61
CCHCR1-227ENST00000508852 BTAF1O14981 1849 aa18.86■□□□□ 0.61
CCHCR1-227ENST00000508852 SLC15A2Q16348 729 aa18.85■□□□□ 0.61
CCHCR1-227ENST00000508852 DDX54Q8TDD1 881 aaKnown RBP18.85■□□□□ 0.61
CCHCR1-227ENST00000508852 ACSBG1Q96GR2 724 aa18.85■□□□□ 0.61
CCHCR1-227ENST00000508852 CASZ1Q86V15 1759 aa18.85■□□□□ 0.61
CCHCR1-227ENST00000508852 INSRP06213 1382 aa18.84■□□□□ 0.61
CCHCR1-227ENST00000508852 FLT4P35916 1363 aa18.84■□□□□ 0.61
CCHCR1-227ENST00000508852 ZCRB1Q8TBF4 217 aaKnown RBP18.84■□□□□ 0.61
CCHCR1-227ENST00000508852 MYOM1P52179 1685 aa18.84■□□□□ 0.61
CCHCR1-227ENST00000508852 RRS1Q15050 365 aaKnown RBP18.83■□□□□ 0.6
CCHCR1-227ENST00000508852 SLC27A3Q5K4L6 730 aa18.83■□□□□ 0.6
CCHCR1-227ENST00000508852 RAPGEF4Q8WZA2 1011 aa18.83■□□□□ 0.6
CCHCR1-227ENST00000508852 ANO8Q9HCE9 1232 aaPredicted RBP18.83■□□□□ 0.6
CCHCR1-227ENST00000508852 RGPD2P0DJD1 1756 aa18.82■□□□□ 0.6
CCHCR1-227ENST00000508852 NSD3Q9BZ95 1437 aa18.81■□□□□ 0.6
CCHCR1-227ENST00000508852 TATP17735 454 aaPredicted RBP18.8■□□□□ 0.6
CCHCR1-227ENST00000508852 EIF4G2P78344 907 aaKnown RBP eCLIP18.8■□□□□ 0.6
CCHCR1-227ENST00000508852 FBLN1P23142 703 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms