RNA–Protein interactions for RNA: ENST00000508717.1

TRIO-212, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 859 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-212ENST00000508717 CAMTA1Q9Y6Y1 1673 aa17.82■□□□□ 0.44
TRIO-212ENST00000508717 BCL9LQ86UU0 1499 aa17.82■□□□□ 0.44
TRIO-212ENST00000508717 CDK12Q9NYV4 1490 aaPredicted RBP17.82■□□□□ 0.44
TRIO-212ENST00000508717 AMPHP49418 695 aa17.81■□□□□ 0.44
TRIO-212ENST00000508717 CHRNA2Q15822 529 aa17.81■□□□□ 0.44
TRIO-212ENST00000508717 NGLY1Q96IV0 654 aa17.81■□□□□ 0.44
TRIO-212ENST00000508717 PEAK1Q9H792 1746 aa17.81■□□□□ 0.44
TRIO-212ENST00000508717 MYBBP1AQ9BQG0 1328 aaKnown RBP17.8■□□□□ 0.44
TRIO-212ENST00000508717 ANP32CO43423 234 aa17.8■□□□□ 0.44
TRIO-212ENST00000508717 MTHFSP49914 203 aa17.8■□□□□ 0.44
TRIO-212ENST00000508717 MEX3CQ5U5Q3 659 aaKnown RBP17.8■□□□□ 0.44
TRIO-212ENST00000508717 C8orf37Q96NL8 207 aa17.8■□□□□ 0.44
TRIO-212ENST00000508717 UNC5CLQ8IV45 518 aa17.79■□□□□ 0.44
TRIO-212ENST00000508717 BTG4Q9NY30 223 aa17.79■□□□□ 0.44
TRIO-212ENST00000508717 COL5A2P05997 1499 aaPredicted RBP17.79■□□□□ 0.44
TRIO-212ENST00000508717 ERBB3P21860 1342 aa17.78■□□□□ 0.44
TRIO-212ENST00000508717 PLCH1Q4KWH8 1693 aa17.78■□□□□ 0.44
TRIO-212ENST00000508717 HSP90AB2PQ58FF8 381 aa17.78■□□□□ 0.44
TRIO-212ENST00000508717 DIEXFQ68CQ4 756 aaKnown RBP17.78■□□□□ 0.44
TRIO-212ENST00000508717 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.78■□□□□ 0.44
TRIO-212ENST00000508717 AFF2P51816 1311 aa17.77■□□□□ 0.44
TRIO-212ENST00000508717 NRAPQ86VF7 1730 aa17.77■□□□□ 0.44
TRIO-212ENST00000508717 CNGB1Q14028 1251 aaPredicted RBP17.76■□□□□ 0.43
TRIO-212ENST00000508717 WDR17Q8IZU2 1322 aa17.75■□□□□ 0.43
TRIO-212ENST00000508717 ZNF772Q68DY9 489 aaPredicted RBP17.75■□□□□ 0.43
TRIO-212ENST00000508717 USP21Q9UK80 565 aa17.75■□□□□ 0.43
TRIO-212ENST00000508717 COL3A1P02461 1466 aaPredicted RBP17.75■□□□□ 0.43
TRIO-212ENST00000508717 PPM1GO15355 546 aaPredicted RBP17.74■□□□□ 0.43
TRIO-212ENST00000508717 VPS72Q15906 364 aa17.74■□□□□ 0.43
TRIO-212ENST00000508717 ANKRD24Q8TF21 1146 aa17.74■□□□□ 0.43
TRIO-212ENST00000508717 ZBTB7CA1YPR0 619 aa17.73■□□□□ 0.43
TRIO-212ENST00000508717 CFAP53Q96M91 514 aa17.73■□□□□ 0.43
TRIO-212ENST00000508717 RGPD5Q99666 1765 aa17.73■□□□□ 0.43
TRIO-212ENST00000508717 ATRNO75882 1429 aa17.72■□□□□ 0.43
TRIO-212ENST00000508717 NCAPD2Q15021 1401 aa17.72■□□□□ 0.43
TRIO-212ENST00000508717 IL13P35225 146 aa17.72■□□□□ 0.43
TRIO-212ENST00000508717 EVA1CP58658 441 aa17.72■□□□□ 0.43
TRIO-212ENST00000508717 EIF4A2Q14240 407 aaKnown RBP17.72■□□□□ 0.43
TRIO-212ENST00000508717 RGS17Q9UGC6 210 aaPredicted RBP17.72■□□□□ 0.43
TRIO-212ENST00000508717 CRB1P82279 1406 aa17.72■□□□□ 0.43
TRIO-212ENST00000508717 FAM208AQ9UK61 1670 aaKnown RBP17.71■□□□□ 0.43
TRIO-212ENST00000508717 LARP1Q6PKG0 1096 aaKnown RBP17.71■□□□□ 0.43
TRIO-212ENST00000508717 CARD10Q9BWT7 1032 aa17.71■□□□□ 0.43
TRIO-212ENST00000508717 TRPC5Q9UL62 973 aaPredicted RBP17.71■□□□□ 0.43
TRIO-212ENST00000508717 SPATA31A5Q5VU36 1347 aa17.71■□□□□ 0.42
TRIO-212ENST00000508717 SPATA31A7Q8IWB4 1347 aa17.71■□□□□ 0.42
TRIO-212ENST00000508717 DIAPH1O60610 1272 aaKnown RBP17.7■□□□□ 0.42
TRIO-212ENST00000508717 THRAP3Q9Y2W1 955 aaKnown RBP17.69■□□□□ 0.42
TRIO-212ENST00000508717 SPATA31A1Q5TZJ5 1347 aa17.69■□□□□ 0.42
TRIO-212ENST00000508717 IGSF1Q8N6C5 1336 aa17.69■□□□□ 0.42
TRIO-212ENST00000508717 PLEKHG2Q9H7P9 1386 aa17.68■□□□□ 0.42
TRIO-212ENST00000508717 NBPF6Q5VWK0 638 aa17.68■□□□□ 0.42
TRIO-212ENST00000508717 NBPF4Q96M43 638 aa17.68■□□□□ 0.42
TRIO-212ENST00000508717 QTRT2Q9H974 415 aaKnown RBP17.68■□□□□ 0.42
TRIO-212ENST00000508717 STRN4Q9NRL3 753 aa17.68■□□□□ 0.42
TRIO-212ENST00000508717 ONECUT3O60422 494 aaPredicted RBP17.67■□□□□ 0.42
TRIO-212ENST00000508717 BARGINQ6ZT62 677 aa17.67■□□□□ 0.42
TRIO-212ENST00000508717 TOM1L2Q6ZVM7 507 aa17.67■□□□□ 0.42
TRIO-212ENST00000508717 GJD4Q96KN9 370 aaPredicted RBP17.67■□□□□ 0.42
TRIO-212ENST00000508717 EYA1Q99502 592 aa17.67■□□□□ 0.42
TRIO-212ENST00000508717 RGPD1P0DJD0 1748 aa17.67■□□□□ 0.42
TRIO-212ENST00000508717 KDRP35968 1356 aa17.66■□□□□ 0.42
TRIO-212ENST00000508717 CCER2I3L3R5 266 aa17.66■□□□□ 0.42
TRIO-212ENST00000508717 CSB-PGBD3P0DP91 1061 aa17.66■□□□□ 0.42
TRIO-212ENST00000508717 LTV1Q96GA3 475 aaPredicted RBP17.66■□□□□ 0.42
TRIO-212ENST00000508717 NUDCQ9Y266 331 aa17.66■□□□□ 0.42
TRIO-212ENST00000508717 TCP11L2Q8N4U5 519 aa17.65■□□□□ 0.42
TRIO-212ENST00000508717 PHF23Q9BUL5 403 aaPredicted RBP17.65■□□□□ 0.42
TRIO-212ENST00000508717 NLRP2Q9NX02 1062 aa17.65■□□□□ 0.42
TRIO-212ENST00000508717 RBM6P78332 1123 aaKnown RBP17.64■□□□□ 0.41
TRIO-212ENST00000508717 CDCA7Q9BWT1 371 aaPredicted RBP17.64■□□□□ 0.41
TRIO-212ENST00000508717 GLI3P10071 1580 aa17.63■□□□□ 0.41
TRIO-212ENST00000508717 DISP2A7MBM2 1401 aa17.63■□□□□ 0.41
TRIO-212ENST00000508717 CCDC184Q52MB2 194 aa17.62■□□□□ 0.41
TRIO-212ENST00000508717 POTEAQ6S8J7 498 aa17.62■□□□□ 0.41
TRIO-212ENST00000508717 RGPD2P0DJD1 1756 aa17.61■□□□□ 0.41
TRIO-212ENST00000508717 FCHSD2O94868 740 aa17.6■□□□□ 0.41
TRIO-212ENST00000508717 MIER1Q8N108 512 aa17.6■□□□□ 0.41
TRIO-212ENST00000508717 PNISRQ8TF01 805 aaKnown RBP17.6■□□□□ 0.41
TRIO-212ENST00000508717 IL2RBP14784 551 aa17.59■□□□□ 0.41
TRIO-212ENST00000508717 RXRBP28702 533 aa17.59■□□□□ 0.41
TRIO-212ENST00000508717 MRS2Q9HD23 443 aa17.59■□□□□ 0.41
TRIO-212ENST00000508717 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.59■□□□□ 0.41
TRIO-212ENST00000508717 CCDC9Q9Y3X0 531 aaKnown RBP17.59■□□□□ 0.41
TRIO-212ENST00000508717 SULT6B1Q6IMI4 303 aa17.58■□□□□ 0.4
TRIO-212ENST00000508717 THSD7AQ9UPZ6 1657 aa17.58■□□□□ 0.4
TRIO-212ENST00000508717 U2SURPO15042 1029 aaKnown RBP17.57■□□□□ 0.4
TRIO-212ENST00000508717 USHBP1Q8N6Y0 703 aa17.57■□□□□ 0.4
TRIO-212ENST00000508717 RAPGEF4Q8WZA2 1011 aa17.57■□□□□ 0.4
TRIO-212ENST00000508717 RSPH6AQ9H0K4 717 aa17.57■□□□□ 0.4
TRIO-212ENST00000508717 USP35Q9P2H5 1018 aa17.57■□□□□ 0.4
TRIO-212ENST00000508717 OVOS2A0A0G2JMS6 1433 aa17.56■□□□□ 0.4
TRIO-212ENST00000508717 U2AF1L5P0DN76 240 aaPredicted RBP17.56■□□□□ 0.4
TRIO-212ENST00000508717 U2AF1Q01081 240 aaKnown RBP eCLIP17.56■□□□□ 0.4
TRIO-212ENST00000508717 AEBP1Q8IUX7 1158 aa17.56■□□□□ 0.4
TRIO-212ENST00000508717 PNNQ9H307 717 aaKnown RBP17.56■□□□□ 0.4
TRIO-212ENST00000508717 MEGF6O75095 1541 aa17.56■□□□□ 0.4
TRIO-212ENST00000508717 WNK3Q9BYP7 1800 aa17.56■□□□□ 0.4
TRIO-212ENST00000508717 FAM98CQ17RN3 349 aaKnown RBP17.55■□□□□ 0.4
TRIO-212ENST00000508717 PARP4Q9UKK3 1724 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms