RNA–Protein interactions for RNA: ENST00000508514.5

SKP2-204, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3 BASIC

Gene SKP2, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-204ENST00000508514 SLC12A5Q9H2X9 1139 aa25.5■■□□□ 1.67
SKP2-204ENST00000508514 PEAK1Q9H792 1746 aa25.5■■□□□ 1.67
SKP2-204ENST00000508514 PARD3Q8TEW0 1356 aa25.49■■□□□ 1.67
SKP2-204ENST00000508514 PTF1AQ7RTS3 328 aa25.49■■□□□ 1.67
SKP2-204ENST00000508514 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.49■■□□□ 1.67
SKP2-204ENST00000508514 USP31Q70CQ4 1352 aa25.48■■□□□ 1.67
SKP2-204ENST00000508514 TONSLQ96HA7 1378 aa25.48■■□□□ 1.67
SKP2-204ENST00000508514 NME9Q86XW9 330 aa25.48■■□□□ 1.67
SKP2-204ENST00000508514 MON2Q7Z3U7 1717 aa25.48■■□□□ 1.67
SKP2-204ENST00000508514 LRRC37A3O60309 1634 aa25.48■■□□□ 1.67
SKP2-204ENST00000508514 RGPD5Q99666 1765 aa25.47■■□□□ 1.67
SKP2-204ENST00000508514 DDB1Q16531 1140 aa25.46■■□□□ 1.67
SKP2-204ENST00000508514 MARCH10Q8NA82 808 aaPredicted RBP25.46■■□□□ 1.67
SKP2-204ENST00000508514 CARD10Q9BWT7 1032 aa25.46■■□□□ 1.67
SKP2-204ENST00000508514 TMC1Q8TDI8 760 aa25.45■■□□□ 1.66
SKP2-204ENST00000508514 RREB1Q92766 1687 aa25.45■■□□□ 1.66
SKP2-204ENST00000508514 TESK2Q96S53 571 aa25.44■■□□□ 1.66
SKP2-204ENST00000508514 OVOS2A0A0G2JMS6 1433 aa25.44■■□□□ 1.66
SKP2-204ENST00000508514 OVOS2A0A0J9YW53 1432 aa25.44■■□□□ 1.66
SKP2-204ENST00000508514 OVOS2Q6IE36 1432 aa25.44■■□□□ 1.66
SKP2-204ENST00000508514 NUP188Q5SRE5 1749 aa25.42■■□□□ 1.66
SKP2-204ENST00000508514 CSB-PGBD3P0DP91 1061 aa25.41■■□□□ 1.66
SKP2-204ENST00000508514 USP54Q70EL1 1684 aa25.4■■□□□ 1.66
SKP2-204ENST00000508514 C11orf95C9JLR9 678 aaPredicted RBP25.4■■□□□ 1.66
SKP2-204ENST00000508514 PUS7Q96PZ0 661 aaKnown RBP25.4■■□□□ 1.66
SKP2-204ENST00000508514 WNK3Q9BYP7 1800 aa25.4■■□□□ 1.66
SKP2-204ENST00000508514 ST20-MTHFSA0A0A6YYL1 179 aa25.39■■□□□ 1.66
SKP2-204ENST00000508514 CDCA7Q9BWT1 371 aaPredicted RBP25.39■■□□□ 1.66
SKP2-204ENST00000508514 A0A1W2PP64 1363 aa25.39■■□□□ 1.65
SKP2-204ENST00000508514 SBF2Q86WG5 1849 aa25.39■■□□□ 1.65
SKP2-204ENST00000508514 HDGFL2Q7Z4V5 671 aaPredicted RBP25.38■■□□□ 1.65
SKP2-204ENST00000508514 BCL11BQ9C0K0 894 aaPredicted RBP25.38■■□□□ 1.65
SKP2-204ENST00000508514 BCL9O00512 1426 aa25.37■■□□□ 1.65
SKP2-204ENST00000508514 EDC4Q6P2E9 1401 aaKnown RBP25.37■■□□□ 1.65
SKP2-204ENST00000508514 PLSCR1O15162 318 aa25.37■■□□□ 1.65
SKP2-204ENST00000508514 PROM2Q8N271 834 aa25.37■■□□□ 1.65
SKP2-204ENST00000508514 ABCC6O95255 1503 aa25.37■■□□□ 1.65
SKP2-204ENST00000508514 ERBB3P21860 1342 aa25.36■■□□□ 1.65
SKP2-204ENST00000508514 TRIM26Q12899 539 aaPredicted RBP25.35■■□□□ 1.65
SKP2-204ENST00000508514 TERF2IPQ9NYB0 399 aa25.35■■□□□ 1.65
SKP2-204ENST00000508514 CCDC7Q96M83 1385 aa25.34■■□□□ 1.65
SKP2-204ENST00000508514 NBPF14Q5TI25 921 aa25.34■■□□□ 1.65
SKP2-204ENST00000508514 EXOC5O00471 708 aa25.33■■□□□ 1.65
SKP2-204ENST00000508514 ANO8Q9HCE9 1232 aaPredicted RBP25.31■■□□□ 1.64
SKP2-204ENST00000508514 ANKRD24Q8TF21 1146 aa25.3■■□□□ 1.64
SKP2-204ENST00000508514 NLRP2Q9NX02 1062 aa25.3■■□□□ 1.64
SKP2-204ENST00000508514 LTN1O94822 1766 aa25.29■■□□□ 1.64
SKP2-204ENST00000508514 KCNQ2O43526 872 aa25.29■■□□□ 1.64
SKP2-204ENST00000508514 RGPD3A6NKT7 1758 aaPredicted RBP25.28■■□□□ 1.64
SKP2-204ENST00000508514 RGPD4Q7Z3J3 1758 aa25.28■■□□□ 1.64
SKP2-204ENST00000508514 FBLN1P23142 703 aa25.28■■□□□ 1.64
SKP2-204ENST00000508514 TNS2Q63HR2 1409 aa25.28■■□□□ 1.64
SKP2-204ENST00000508514 PDGFDQ9GZP0 370 aaPredicted RBP25.26■■□□□ 1.63
SKP2-204ENST00000508514 IL2RBP14784 551 aa25.25■■□□□ 1.63
SKP2-204ENST00000508514 IP6K1Q92551 441 aa25.25■■□□□ 1.63
SKP2-204ENST00000508514 NINLQ9Y2I6 1382 aa25.25■■□□□ 1.63
SKP2-204ENST00000508514 TXNRD1Q16881 649 aa25.22■■□□□ 1.63
SKP2-204ENST00000508514 ACSBG1Q96GR2 724 aa25.22■■□□□ 1.63
SKP2-204ENST00000508514 MAP3K19Q56UN5 1328 aa25.21■■□□□ 1.63
SKP2-204ENST00000508514 USP47Q96K76 1375 aa25.2■■□□□ 1.63
SKP2-204ENST00000508514 SPON1Q9HCB6 807 aa25.2■■□□□ 1.62
SKP2-204ENST00000508514 ANKRD36BQ8N2N9 1353 aa25.19■■□□□ 1.62
SKP2-204ENST00000508514 SLC24A1O60721 1099 aa25.19■■□□□ 1.62
SKP2-204ENST00000508514 LTV1Q96GA3 475 aaPredicted RBP25.19■■□□□ 1.62
SKP2-204ENST00000508514 COG3Q96JB2 828 aa25.19■■□□□ 1.62
SKP2-204ENST00000508514 FYB1O15117 783 aa25.18■■□□□ 1.62
SKP2-204ENST00000508514 HOXC9P31274 260 aa25.18■■□□□ 1.62
SKP2-204ENST00000508514 CASZ1Q86V15 1759 aa25.17■■□□□ 1.62
SKP2-204ENST00000508514 NHSQ6T4R5 1651 aa25.16■■□□□ 1.62
SKP2-204ENST00000508514 TMF1P82094 1093 aa25.15■■□□□ 1.62
SKP2-204ENST00000508514 GGNBP2Q9H3C7 697 aa25.14■■□□□ 1.62
SKP2-204ENST00000508514 RRS1Q15050 365 aaKnown RBP25.13■■□□□ 1.61
SKP2-204ENST00000508514 SLC15A2Q16348 729 aa25.13■■□□□ 1.61
SKP2-204ENST00000508514 AMPHP49418 695 aa25.12■■□□□ 1.61
SKP2-204ENST00000508514 ZBTB7AO95365 584 aa25.11■■□□□ 1.61
SKP2-204ENST00000508514 PTGER2P43116 358 aa25.11■■□□□ 1.61
SKP2-204ENST00000508514 DDX54Q8TDD1 881 aaKnown RBP25.11■■□□□ 1.61
SKP2-204ENST00000508514 CARD14Q9BXL6 1004 aa25.1■■□□□ 1.61
SKP2-204ENST00000508514 LRRC4BQ9NT99 713 aa25.1■■□□□ 1.61
SKP2-204ENST00000508514 STK32BQ9NY57 414 aa25.1■■□□□ 1.61
SKP2-204ENST00000508514 FAM208AQ9UK61 1670 aaKnown RBP25.1■■□□□ 1.61
SKP2-204ENST00000508514 PPP1R1BQ9UD71 204 aaPredicted RBP25.09■■□□□ 1.61
SKP2-204ENST00000508514 NBPF6Q5VWK0 638 aa25.08■■□□□ 1.61
SKP2-204ENST00000508514 NBPF4Q96M43 638 aa25.08■■□□□ 1.61
SKP2-204ENST00000508514 BTAF1O14981 1849 aa25.07■■□□□ 1.6
SKP2-204ENST00000508514 ATF5Q9Y2D1 282 aaPredicted RBP25.07■■□□□ 1.6
SKP2-204ENST00000508514 RGPD2P0DJD1 1756 aa25.07■■□□□ 1.6
SKP2-204ENST00000508514 PAPPAQ13219 1627 aa25.06■■□□□ 1.6
SKP2-204ENST00000508514 MEGF6O75095 1541 aa25.06■■□□□ 1.6
SKP2-204ENST00000508514 ZNF827Q17R98 1081 aa25.05■■□□□ 1.6
SKP2-204ENST00000508514 RTL1A6NKG5 1358 aa25.05■■□□□ 1.6
SKP2-204ENST00000508514 SGIP1Q9BQI5 828 aa25.04■■□□□ 1.6
SKP2-204ENST00000508514 HSP90AB2PQ58FF8 381 aa25.03■■□□□ 1.6
SKP2-204ENST00000508514 USHBP1Q8N6Y0 703 aa25.03■■□□□ 1.6
SKP2-204ENST00000508514 ZCRB1Q8TBF4 217 aaKnown RBP25.03■■□□□ 1.6
SKP2-204ENST00000508514 TIMELESSQ9UNS1 1208 aa25.03■■□□□ 1.6
SKP2-204ENST00000508514 PRIM1P49642 420 aaKnown RBP25.02■■□□□ 1.6
SKP2-204ENST00000508514 CDCA8Q53HL2 280 aa25.02■■□□□ 1.6
SKP2-204ENST00000508514 SHANK3Q9BYB0 1731 aa25.02■■□□□ 1.6
SKP2-204ENST00000508514 NSD2O96028 1365 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms