RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 JCADQ9P266 1359 aa11.77□□□□□ -0.52
USP46-207ENST00000508499 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.77□□□□□ -0.53
USP46-207ENST00000508499 KCNH5Q8NCM2 988 aa11.77□□□□□ -0.53
USP46-207ENST00000508499 PRKRIP1Q9H875 184 aaPredicted RBP11.77□□□□□ -0.53
USP46-207ENST00000508499 CPDO75976 1380 aa11.76□□□□□ -0.53
USP46-207ENST00000508499 COL18A1P39060 1754 aa11.76□□□□□ -0.53
USP46-207ENST00000508499 PAK3O75914 559 aaPredicted RBP11.76□□□□□ -0.53
USP46-207ENST00000508499 NLRP6P59044 892 aa11.76□□□□□ -0.53
USP46-207ENST00000508499 XPCQ01831 940 aaPredicted RBP11.76□□□□□ -0.53
USP46-207ENST00000508499 LMO7Q8WWI1 1683 aa11.75□□□□□ -0.53
USP46-207ENST00000508499 INSRP06213 1382 aa11.75□□□□□ -0.53
USP46-207ENST00000508499 DIEXFQ68CQ4 756 aaKnown RBP11.75□□□□□ -0.53
USP46-207ENST00000508499 GGNBP2Q9H3C7 697 aa11.75□□□□□ -0.53
USP46-207ENST00000508499 NWD2Q9ULI1 1742 aa11.75□□□□□ -0.53
USP46-207ENST00000508499 SPATA31A6Q5VVP1 1343 aa11.74□□□□□ -0.53
USP46-207ENST00000508499 COL14A1Q05707 1796 aaKnown RBP11.74□□□□□ -0.53
USP46-207ENST00000508499 FAM208AQ9UK61 1670 aaKnown RBP11.74□□□□□ -0.53
USP46-207ENST00000508499 RTL1A6NKG5 1358 aa11.74□□□□□ -0.53
USP46-207ENST00000508499 CDK12Q9NYV4 1490 aaPredicted RBP11.73□□□□□ -0.53
USP46-207ENST00000508499 PEAK1Q9H792 1746 aa11.73□□□□□ -0.53
USP46-207ENST00000508499 GCP02774 474 aa11.73□□□□□ -0.53
USP46-207ENST00000508499 MORC1Q86VD1 984 aa11.73□□□□□ -0.53
USP46-207ENST00000508499 ANP32CO43423 234 aa11.72□□□□□ -0.53
USP46-207ENST00000508499 HSPA1LP34931 641 aa11.72□□□□□ -0.53
USP46-207ENST00000508499 MYBBP1AQ9BQG0 1328 aaKnown RBP11.72□□□□□ -0.53
USP46-207ENST00000508499 CC2D1BQ5T0F9 858 aaKnown RBP11.71□□□□□ -0.53
USP46-207ENST00000508499 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.71□□□□□ -0.53
USP46-207ENST00000508499 ZRANB1Q9UGI0 708 aa11.71□□□□□ -0.53
USP46-207ENST00000508499 RGPD5Q99666 1765 aa11.71□□□□□ -0.53
USP46-207ENST00000508499 PLCH1Q4KWH8 1693 aa11.71□□□□□ -0.54
USP46-207ENST00000508499 BLMP54132 1417 aaPredicted RBP11.7□□□□□ -0.54
USP46-207ENST00000508499 ARHGEF25Q86VW2 580 aa11.7□□□□□ -0.54
USP46-207ENST00000508499 CAMTA1Q9Y6Y1 1673 aa11.7□□□□□ -0.54
USP46-207ENST00000508499 RGPD1P0DJD0 1748 aa11.7□□□□□ -0.54
USP46-207ENST00000508499 PPP2R1AP30153 589 aa11.69□□□□□ -0.54
USP46-207ENST00000508499 POLKQ9UBT6 870 aa11.69□□□□□ -0.54
USP46-207ENST00000508499 COL3A1P02461 1466 aaPredicted RBP11.69□□□□□ -0.54
USP46-207ENST00000508499 FLT4P35916 1363 aa11.69□□□□□ -0.54
USP46-207ENST00000508499 NRAPQ86VF7 1730 aa11.69□□□□□ -0.54
USP46-207ENST00000508499 SSUH2Q9Y2M2 353 aa11.69□□□□□ -0.54
USP46-207ENST00000508499 LMOD2Q6P5Q4 547 aa11.68□□□□□ -0.54
USP46-207ENST00000508499 PLSCR2Q9NRY7 297 aa11.68□□□□□ -0.54
USP46-207ENST00000508499 MAP3K19Q56UN5 1328 aa11.67□□□□□ -0.54
USP46-207ENST00000508499 LRP6O75581 1613 aa11.67□□□□□ -0.54
USP46-207ENST00000508499 CCER2I3L3R5 266 aa11.67□□□□□ -0.54
USP46-207ENST00000508499 NUTM2GQ5VZR2 741 aa11.67□□□□□ -0.54
USP46-207ENST00000508499 KIAA0232Q92628 1395 aa11.67□□□□□ -0.54
USP46-207ENST00000508499 SLIT2O94813 1529 aa11.66□□□□□ -0.54
USP46-207ENST00000508499 IP6K1Q92551 441 aa11.66□□□□□ -0.54
USP46-207ENST00000508499 PLEKHG2Q9H7P9 1386 aa11.66□□□□□ -0.54
USP46-207ENST00000508499 NCAPD2Q15021 1401 aa11.66□□□□□ -0.54
USP46-207ENST00000508499 MTHFSP49914 203 aa11.65□□□□□ -0.54
USP46-207ENST00000508499 CABLES1Q8TDN4 633 aa11.65□□□□□ -0.54
USP46-207ENST00000508499 HOXC9P31274 260 aa11.64□□□□□ -0.55
USP46-207ENST00000508499 EMILIN1Q9Y6C2 1016 aa11.64□□□□□ -0.55
USP46-207ENST00000508499 COL5A2P05997 1499 aaPredicted RBP11.64□□□□□ -0.55
USP46-207ENST00000508499 RGPD2P0DJD1 1756 aa11.63□□□□□ -0.55
USP46-207ENST00000508499 RRS1Q15050 365 aaKnown RBP11.63□□□□□ -0.55
USP46-207ENST00000508499 WNK3Q9BYP7 1800 aa11.63□□□□□ -0.55
USP46-207ENST00000508499 ERBB3P21860 1342 aa11.62□□□□□ -0.55
USP46-207ENST00000508499 FNBP4Q8N3X1 1017 aaPredicted RBP11.62□□□□□ -0.55
USP46-207ENST00000508499 CFAP53Q96M91 514 aa11.62□□□□□ -0.55
USP46-207ENST00000508499 PRDM11Q9NQV5 511 aa11.62□□□□□ -0.55
USP46-207ENST00000508499 FAM83GA6ND36 823 aa11.61□□□□□ -0.55
USP46-207ENST00000508499 FBLN1P23142 703 aa11.61□□□□□ -0.55
USP46-207ENST00000508499 TNNT2P45379 298 aaPredicted RBP11.61□□□□□ -0.55
USP46-207ENST00000508499 AMPHP49418 695 aa11.61□□□□□ -0.55
USP46-207ENST00000508499 HAP1P54257 671 aaPredicted RBP11.61□□□□□ -0.55
USP46-207ENST00000508499 ZC3H6P61129 1189 aaKnown RBP11.61□□□□□ -0.55
USP46-207ENST00000508499 KDRP35968 1356 aa11.61□□□□□ -0.55
USP46-207ENST00000508499 POTEIP0CG38 1075 aa11.6□□□□□ -0.55
USP46-207ENST00000508499 AXIN2Q9Y2T1 843 aa11.6□□□□□ -0.55
USP46-207ENST00000508499 BCL9LQ86UU0 1499 aa11.6□□□□□ -0.55
USP46-207ENST00000508499 IL13P35225 146 aa11.6□□□□□ -0.55
USP46-207ENST00000508499 HSP90AB2PQ58FF8 381 aa11.6□□□□□ -0.55
USP46-207ENST00000508499 CHADLQ6NUI6 762 aa11.6□□□□□ -0.55
USP46-207ENST00000508499 MIER1Q8N108 512 aa11.6□□□□□ -0.55
USP46-207ENST00000508499 WDR17Q8IZU2 1322 aa11.59□□□□□ -0.55
USP46-207ENST00000508499 IGSF1Q8N6C5 1336 aa11.59□□□□□ -0.55
USP46-207ENST00000508499 DIAPH1O60610 1272 aaKnown RBP11.59□□□□□ -0.55
USP46-207ENST00000508499 CLCN6P51797 869 aa11.59□□□□□ -0.55
USP46-207ENST00000508499 PARP4Q9UKK3 1724 aaKnown RBP11.59□□□□□ -0.55
USP46-207ENST00000508499 CRB1P82279 1406 aa11.58□□□□□ -0.56
USP46-207ENST00000508499 SOX12O15370 315 aa11.58□□□□□ -0.56
USP46-207ENST00000508499 EIF4A2Q14240 407 aaKnown RBP11.58□□□□□ -0.56
USP46-207ENST00000508499 PNISRQ8TF01 805 aaKnown RBP11.58□□□□□ -0.56
USP46-207ENST00000508499 PKD1L3Q7Z443 1732 aa11.57□□□□□ -0.56
USP46-207ENST00000508499 NUDCQ9Y266 331 aa11.57□□□□□ -0.56
USP46-207ENST00000508499 ADAMTS2O95450 1211 aa11.56□□□□□ -0.56
USP46-207ENST00000508499 MKRN4PQ13434 485 aaPredicted RBP11.56□□□□□ -0.56
USP46-207ENST00000508499 CHRNA2Q15822 529 aa11.56□□□□□ -0.56
USP46-207ENST00000508499 ANKRD24Q8TF21 1146 aa11.56□□□□□ -0.56
USP46-207ENST00000508499 MRS2Q9HD23 443 aa11.56□□□□□ -0.56
USP46-207ENST00000508499 BTG4Q9NY30 223 aa11.56□□□□□ -0.56
USP46-207ENST00000508499 NUTM2BA6NNL0 878 aaPredicted RBP11.55□□□□□ -0.56
USP46-207ENST00000508499 NUTM2EB1AL46 878 aaPredicted RBP11.55□□□□□ -0.56
USP46-207ENST00000508499 PPM1GO15355 546 aaPredicted RBP11.55□□□□□ -0.56
USP46-207ENST00000508499 CNGB1Q14028 1251 aaPredicted RBP11.55□□□□□ -0.56
USP46-207ENST00000508499 CCDC184Q52MB2 194 aa11.55□□□□□ -0.56
USP46-207ENST00000508499 UNC5CLQ8IV45 518 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms