RNA–Protein interactions for RNA: ENST00000508297.2

ATP2C1-213, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 540 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-213ENST00000508297 ZNF211Q13398 564 aaPredicted RBP5.85□□□□□ -1.47
ATP2C1-213ENST00000508297 LDLRAD1Q5T700 205 aa5.85□□□□□ -1.47
ATP2C1-213ENST00000508297 NUDT18Q6ZVK8 323 aa5.85□□□□□ -1.47
ATP2C1-213ENST00000508297 CERS3Q8IU89 383 aa5.85□□□□□ -1.47
ATP2C1-213ENST00000508297 PLEKHM2Q8IWE5 1019 aa5.85□□□□□ -1.47
ATP2C1-213ENST00000508297 SLF2Q8IX21 1173 aa5.85□□□□□ -1.47
ATP2C1-213ENST00000508297 ZDHHC16Q969W1 377 aa5.85□□□□□ -1.47
ATP2C1-213ENST00000508297 TMEM134Q9H6X4 195 aa5.85□□□□□ -1.47
ATP2C1-213ENST00000508297 GFRA3O60609 400 aa5.84□□□□□ -1.47
ATP2C1-213ENST00000508297 ABL1P00519 1130 aa5.84□□□□□ -1.47
ATP2C1-213ENST00000508297 FBXO45P0C2W1 286 aa5.84□□□□□ -1.47
ATP2C1-213ENST00000508297 BRD2P25440 801 aaKnown RBP5.84□□□□□ -1.47
ATP2C1-213ENST00000508297 DNAJB2P25686 324 aa5.84□□□□□ -1.47
ATP2C1-213ENST00000508297 GCGRP47871 477 aa5.84□□□□□ -1.47
ATP2C1-213ENST00000508297 RAD51AP2Q09MP3 1159 aa5.84□□□□□ -1.47
ATP2C1-213ENST00000508297 ECM1Q16610 540 aa5.84□□□□□ -1.47
ATP2C1-213ENST00000508297 NFATC2IPQ8NCF5 419 aa5.84□□□□□ -1.47
ATP2C1-213ENST00000508297 PIK3R5Q8WYR1 880 aa5.84□□□□□ -1.47
ATP2C1-213ENST00000508297 DNAJC2Q99543 621 aaKnown RBP5.84□□□□□ -1.47
ATP2C1-213ENST00000508297 CDCA7Q9BWT1 371 aaPredicted RBP5.84□□□□□ -1.47
ATP2C1-213ENST00000508297 TSKSQ9UJT2 592 aa5.84□□□□□ -1.47
ATP2C1-213ENST00000508297 COL9A1P20849 921 aa5.83□□□□□ -1.48
ATP2C1-213ENST00000508297 MAPK1P28482 360 aa5.83□□□□□ -1.48
ATP2C1-213ENST00000508297 USP46P62068 366 aa5.83□□□□□ -1.48
ATP2C1-213ENST00000508297 NR1H3Q13133 447 aa5.83□□□□□ -1.48
ATP2C1-213ENST00000508297 ANKMY2Q8IV38 441 aa5.83□□□□□ -1.48
ATP2C1-213ENST00000508297 SYMPKQ92797 1274 aaKnown RBP5.83□□□□□ -1.48
ATP2C1-213ENST00000508297 RABGEF1Q9UJ41 708 aa5.83□□□□□ -1.48
ATP2C1-213ENST00000508297 ARID4BQ4LE39 1312 aaPredicted RBP5.82□□□□□ -1.48
ATP2C1-213ENST00000508297 SOWAHBA6NEL2 793 aa5.82□□□□□ -1.48
ATP2C1-213ENST00000508297 H3BRB1 525 aa5.82□□□□□ -1.48
ATP2C1-213ENST00000508297 KCNH2Q12809 1159 aa5.82□□□□□ -1.48
ATP2C1-213ENST00000508297 DPYDQ12882 1025 aa5.82□□□□□ -1.48
ATP2C1-213ENST00000508297 NCOA4Q13772 614 aa5.82□□□□□ -1.48
ATP2C1-213ENST00000508297 MRPL58Q14197 206 aaKnown RBP5.82□□□□□ -1.48
ATP2C1-213ENST00000508297 LARP1Q6PKG0 1096 aaKnown RBP5.82□□□□□ -1.48
ATP2C1-213ENST00000508297 LAPTM4BQ86VI4 370 aa5.82□□□□□ -1.48
ATP2C1-213ENST00000508297 ASB16Q96NS5 453 aa5.82□□□□□ -1.48
ATP2C1-213ENST00000508297 LNPKQ9C0E8 428 aa5.82□□□□□ -1.48
ATP2C1-213ENST00000508297 TUT1Q9H6E5 874 aaKnown RBP5.82□□□□□ -1.48
ATP2C1-213ENST00000508297 BRPF3Q9ULD4 1205 aa5.82□□□□□ -1.48
ATP2C1-213ENST00000508297 C6orf229H3BNL8 230 aa5.81□□□□□ -1.48
ATP2C1-213ENST00000508297 PRMT3O60678 531 aa5.81□□□□□ -1.48
ATP2C1-213ENST00000508297 ICMTO60725 284 aa5.81□□□□□ -1.48
ATP2C1-213ENST00000508297 PNMA1Q8ND90 353 aa5.81□□□□□ -1.48
ATP2C1-213ENST00000508297 DHX38Q92620 1227 aaKnown RBP5.81□□□□□ -1.48
ATP2C1-213ENST00000508297 SMAPO00193 183 aa5.8□□□□□ -1.48
ATP2C1-213ENST00000508297 MARCH6O60337 910 aa5.8□□□□□ -1.48
ATP2C1-213ENST00000508297 SLC10A3P09131 477 aa5.8□□□□□ -1.48
ATP2C1-213ENST00000508297 BCAMP50895 628 aa5.8□□□□□ -1.48
ATP2C1-213ENST00000508297 C1orf216Q8TAB5 229 aa5.8□□□□□ -1.48
ATP2C1-213ENST00000508297 PRIMPOLQ96LW4 560 aa5.8□□□□□ -1.48
ATP2C1-213ENST00000508297 TANGO6Q9C0B7 1094 aa5.8□□□□□ -1.48
ATP2C1-213ENST00000508297 EGFL7Q9UHF1 273 aa5.8□□□□□ -1.48
ATP2C1-213ENST00000508297 PNMA3Q9UL41 463 aa5.8□□□□□ -1.48
ATP2C1-213ENST00000508297 SBNO2Q9Y2G9 1366 aa5.8□□□□□ -1.48
ATP2C1-213ENST00000508297 NRG2O14511 850 aaPredicted RBP5.79□□□□□ -1.48
ATP2C1-213ENST00000508297 SCAMP3O14828 347 aaKnown RBP5.79□□□□□ -1.48
ATP2C1-213ENST00000508297 CLDN10P78369 228 aa5.79□□□□□ -1.48
ATP2C1-213ENST00000508297 SWI5Q1ZZU3 235 aa5.79□□□□□ -1.48
ATP2C1-213ENST00000508297 EAPPQ56P03 285 aaPredicted RBP5.79□□□□□ -1.48
ATP2C1-213ENST00000508297 ZNF787Q6DD87 383 aa5.79□□□□□ -1.48
ATP2C1-213ENST00000508297 TAS1R3Q7RTX0 852 aa5.79□□□□□ -1.48
ATP2C1-213ENST00000508297 METTL16Q86W50 562 aaKnown RBP5.79□□□□□ -1.48
ATP2C1-213ENST00000508297 GLYCTKQ8IVS8 523 aa5.79□□□□□ -1.48
ATP2C1-213ENST00000508297 FAM9AQ8IZU1 332 aaPredicted RBP5.79□□□□□ -1.48
ATP2C1-213ENST00000508297 TATDN2Q93075 761 aa5.79□□□□□ -1.48
ATP2C1-213ENST00000508297 ZNF594Q96JF6 807 aaPredicted RBP5.79□□□□□ -1.48
ATP2C1-213ENST00000508297 TINF2Q9BSI4 451 aa5.79□□□□□ -1.48
ATP2C1-213ENST00000508297 ZBBXA8MT70 800 aa5.78□□□□□ -1.48
ATP2C1-213ENST00000508297 ATP5J2-PTCD1G3V325 749 aa5.78□□□□□ -1.48
ATP2C1-213ENST00000508297 LGR5O75473 907 aa5.78□□□□□ -1.48
ATP2C1-213ENST00000508297 DKK1O94907 266 aa5.78□□□□□ -1.48
ATP2C1-213ENST00000508297 ARHGAP4P98171 946 aa5.78□□□□□ -1.48
ATP2C1-213ENST00000508297 MTMR3Q13615 1198 aa5.78□□□□□ -1.48
ATP2C1-213ENST00000508297 OCLNQ16625 522 aa5.78□□□□□ -1.48
ATP2C1-213ENST00000508297 OGFOD1Q8N543 542 aa5.78□□□□□ -1.48
ATP2C1-213ENST00000508297 GPATCH3Q96I76 525 aa5.78□□□□□ -1.48
ATP2C1-213ENST00000508297 SEPT3Q9UH03 358 aa5.78□□□□□ -1.48
ATP2C1-213ENST00000508297 DCTN4Q9UJW0 460 aa5.78□□□□□ -1.48
ATP2C1-213ENST00000508297 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.78□□□□□ -1.48
ATP2C1-213ENST00000508297 LZTS3O60299 673 aaPredicted RBP5.77□□□□□ -1.49
ATP2C1-213ENST00000508297 P4HBP07237 508 aaKnown RBP5.77□□□□□ -1.49
ATP2C1-213ENST00000508297 CCDC144BQ3MJ40 725 aa5.77□□□□□ -1.49
ATP2C1-213ENST00000508297 TSGA10IPQ3SY00 556 aa5.77□□□□□ -1.49
ATP2C1-213ENST00000508297 CAPN12Q6ZSI9 719 aa5.77□□□□□ -1.49
ATP2C1-213ENST00000508297 NOL8Q76FK4 1167 aaKnown RBP5.77□□□□□ -1.49
ATP2C1-213ENST00000508297 NOP9Q86U38 636 aaKnown RBP5.77□□□□□ -1.49
ATP2C1-213ENST00000508297 NT5DC4Q86YG4 428 aa5.77□□□□□ -1.49
ATP2C1-213ENST00000508297 PHTF2Q8N3S3 785 aa5.77□□□□□ -1.49
ATP2C1-213ENST00000508297 GTF3C2Q8WUA4 911 aaPredicted RBP5.77□□□□□ -1.49
ATP2C1-213ENST00000508297 ZFRQ96KR1 1074 aaKnown RBP5.77□□□□□ -1.49
ATP2C1-213ENST00000508297 FAM161BQ96MY7 647 aa5.77□□□□□ -1.49
ATP2C1-213ENST00000508297 PIF1Q9H611 641 aa5.77□□□□□ -1.49
ATP2C1-213ENST00000508297 RNF19AQ9NV58 838 aa5.77□□□□□ -1.49
ATP2C1-213ENST00000508297 WBP1LQ9NX94 342 aa5.77□□□□□ -1.49
ATP2C1-213ENST00000508297 CXXC1Q9P0U4 656 aaPredicted RBP5.77□□□□□ -1.49
ATP2C1-213ENST00000508297 PRKAG2Q9UGJ0 569 aa5.77□□□□□ -1.49
ATP2C1-213ENST00000508297 IQSEC3Q9UPP2 1182 aaPredicted RBP5.77□□□□□ -1.49
ATP2C1-213ENST00000508297 KIAA1024Q9UPX6 916 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms